Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1989
Gene name
LocationContig_146:12136..13706
Strand-
Gene length (bp)1570
Transcript length (bp)1110
Coding sequence length (bp)1110
Protein length (aa) 370

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 69 91 22
3 111 133 22
4 146 168 22
5 192 214 22
6 227 249 22
7 264 286 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1989
MAPALATNPDTTPAMPPPPGQVSNLVDPPSQGYATVIAVVLYMVIATPCVVARLYTRAVVHKKLWWDDWSSVLAL
IGLYGFCCIPLIGLQYGFGVDEWNVSQSHLQEFNKLFSIIEIVARISIFFTKLSILLLYLRYFCPSGARRGWIFY
STLFVIAFNALYCIALVLVVRLQCVGQPQAVVQAGTCINHYLVLVTASAINVVTDLLILLIPLIAVWHLRLPQRR
KLGLLLVFAVGGLGCLASVARLAYQVPEASNKNQTQILTLVSLLALAEHVIGIVVGCMPLWPALYRHLFPRRHSS
LQSPQSGSLWKRTIGHVTVRRRPDRWGSSSALVTETERGVGEEREMERVGDKDGTSEAIKERPSGSTAK*
Coding >Hirsu2|1989
ATGGCGCCGGCCTTAGCGACCAACCCCGACACGACGCCGGCCATGCCGCCGCCGCCGGGCCAGGTGTCGAACCTC
GTCGACCCGCCGTCCCAGGGCTATGCGACGGTCATTGCCGTCGTCCTGTACATGGTGATCGCGACCCCCTGCGTC
GTCGCCCGGCTGTACACGAGGGCCGTGGTTCACAAGAAGCTGTGGTGGGATGACTGGTCCTCGGTCCTCGCGCTG
ATCGGCCTTTACGGCTTCTGCTGCATCCCCCTCATCGGCCTGCAGTATGGCTTCGGCGTCGATGAGTGGAACGTG
TCCCAGTCCCACCTGCAGGAGTTCAACAAGCTGTTCTCCATCATTGAGATCGTGGCCCGCATCTCCATCTTCTTC
ACCAAGCTCTCCATCCTGCTCCTCTACCTGCGCTACTTCTGCCCGTCGGGCGCCCGCCGCGGCTGGATCTTCTAC
TCGACCCTCTTCGTCATCGCCTTCAACGCCCTCTACTGCATCGCCCTCGTCCTCGTCGTCCGGCTGCAGTGCGTC
GGCCAGCCGCAGGCCGTCGTCCAGGCCGGCACCTGCATCAACCACTACCTCGTCCTCGTCACGGCGTCGGCCATC
AACGTGGTGACGGACCTGCTGATCCTGCTGATCCCCCTCATCGCCGTCTGGCATCTGCGCCTGCCGCAGCGGCGC
AAGCTGGGCCTGCTGCTCGTCTTTGCCGTCGGCGGCCTAGGCTGCCTCGCCAGCGTTGCCCGTCTCGCCTACCAG
GTGCCCGAGGCGTCCAACAAGAATCAGACGCAAATCCTGACCCTTGTATCCCTGCTCGCCCTCGCCGAACATGTC
ATCGGCATCGTCGTCGGCTGCATGCCCCTCTGGCCGGCGCTGTACCGACACCTCTTCCCACGCCGCCACTCGTCT
CTCCAATCGCCCCAGAGCGGCAGCCTCTGGAAGCGCACAATCGGACACGTGACGGTCCGTCGACGACCGGATCGC
TGGGGCAGCTCGAGCGCTCTGGTGACGGAGACGGAGCGGGGGGTGGGAGAGGAGAGGGAGATGGAGAGGGTGGGC
GACAAGGACGGGACGAGCGAGGCCATCAAGGAGAGGCCATCGGGCAGCACCGCCAAGTAG
Transcript >Hirsu2|1989
ATGGCGCCGGCCTTAGCGACCAACCCCGACACGACGCCGGCCATGCCGCCGCCGCCGGGCCAGGTGTCGAACCTC
GTCGACCCGCCGTCCCAGGGCTATGCGACGGTCATTGCCGTCGTCCTGTACATGGTGATCGCGACCCCCTGCGTC
GTCGCCCGGCTGTACACGAGGGCCGTGGTTCACAAGAAGCTGTGGTGGGATGACTGGTCCTCGGTCCTCGCGCTG
ATCGGCCTTTACGGCTTCTGCTGCATCCCCCTCATCGGCCTGCAGTATGGCTTCGGCGTCGATGAGTGGAACGTG
TCCCAGTCCCACCTGCAGGAGTTCAACAAGCTGTTCTCCATCATTGAGATCGTGGCCCGCATCTCCATCTTCTTC
ACCAAGCTCTCCATCCTGCTCCTCTACCTGCGCTACTTCTGCCCGTCGGGCGCCCGCCGCGGCTGGATCTTCTAC
TCGACCCTCTTCGTCATCGCCTTCAACGCCCTCTACTGCATCGCCCTCGTCCTCGTCGTCCGGCTGCAGTGCGTC
GGCCAGCCGCAGGCCGTCGTCCAGGCCGGCACCTGCATCAACCACTACCTCGTCCTCGTCACGGCGTCGGCCATC
AACGTGGTGACGGACCTGCTGATCCTGCTGATCCCCCTCATCGCCGTCTGGCATCTGCGCCTGCCGCAGCGGCGC
AAGCTGGGCCTGCTGCTCGTCTTTGCCGTCGGCGGCCTAGGCTGCCTCGCCAGCGTTGCCCGTCTCGCCTACCAG
GTGCCCGAGGCGTCCAACAAGAATCAGACGCAAATCCTGACCCTTGTATCCCTGCTCGCCCTCGCCGAACATGTC
ATCGGCATCGTCGTCGGCTGCATGCCCCTCTGGCCGGCGCTGTACCGACACCTCTTCCCACGCCGCCACTCGTCT
CTCCAATCGCCCCAGAGCGGCAGCCTCTGGAAGCGCACAATCGGACACGTGACGGTCCGTCGACGACCGGATCGC
TGGGGCAGCTCGAGCGCTCTGGTGACGGAGACGGAGCGGGGGGTGGGAGAGGAGAGGGAGATGGAGAGGGTGGGC
GACAAGGACGGGACGAGCGAGGCCATCAAGGAGAGGCCATCGGGCAGCACCGCCAAGTAG
Gene >Hirsu2|1989
ATGGCGCCGGCCTTAGCGACCAACCCCGACACGACGCCGGCCATGCCGCCGCCGCCGGGCCAGGTGTCGAACCTC
GTCGACCCGCCGTCCCAGGGCTATGCGACGGTCATTGCCGTCGTCCTGTACATGGTGATCGCGACCCCCTGCGTC
GTCGCCCGGCTGTACACGAGGGCCGTGGTTCACAAGAAGCTGTGGTGGGATGACTGTAAGCCTCGTCCGGTCTCG
GCGTCTGGACGGCTCGGCCTCTAATCATCGTCGTCGTCTGTTGTTCCCAGGGTCCTCGGTCCTCGCGCTGGTCCG
TCCTCCCCGCGCGCCGCGCTCAGCTTGCCGAGCGAGCCTGCTGACCCGCCCAAGATCGGCCTTTACGGCTTCTGC
TGCATCCCCCTCATCGGCCTGCAGTATGGCTTCGGCGTCGATGAGTGGAACGTGTCCCAGTCCCACCTGCAGGAG
TTCAACAAGGTCCGCTTCGTCCTCGGCCCCGTGCCCTCCCCCCTTCAGCCCCCCTTGCTCCGTTGCCCTCGGCCC
TCGCGAGCTCCGTGCCGCGTCGCTCCGTGCCTTGGTCCTCGCCGCGTGCCTCGTCGCTCGGTGCCCCCCCGCCTC
GGCCCTCTCGCGCTGGCCGCCCGCTGACGATCGAGGCCGAAACGCGCACAGCTGTTCTCCATCATTGAGATCGTG
GCCCGCATCTCCATCTTCTTCACCAAGCTCTCCATCCTGCTCCTCTACCTGCGCTACTTCTGCCCGTCGGGCGCC
CGCCGCGGCTGGATCTTCTACTCGACCCTCTTCGTCATCGCCTTCAACGCCCTCTACTGCATCGCCCTCGTCCTC
GTCGTCCGGCTGCAGTGCGTCGGCCAGCCGCAGGCCGTCGTCCAGGCCGGCACCTGCATCAACCACTACCTCGTC
CTCGTCACGGCGTCGGCCATCAACGTGGTGACGGACCTGCTGATCCTGCTGATCCCCCTCATCGCCGTCTGGCAT
CTGCGCCTGCCGCAGCGGCGCAAGCTGGGCCTGCTGCTCGTCTTTGCCGTCGGCGGCCTGTGCGTCGGCCCCCCA
TCCCCTCGCCCCCGGTGCCGGAGCAGGAAGCGCTGACCGGACGACGTGTGTTGCAGAGGCTGCCTCGCCAGCGTT
GCCCGTCTCGCCTACCAGGTGCCCGAGGCGTCCAACAAGAATCAGACGCAAATCCTGACCCTTGTATCCCTGCTC
GCGTAAGTGGCATCGCCCCTGCAATCCCGCTTCAGCCTCGCTCGCATTCCCGGCTAAGCACCGAAACAGCCTCGC
CGAACATGTCATCGGCATCGTCGTCGGCTGCATGCCCCTCTGGCCGGCGCTGTACCGACACCTCTTCCCACGCCG
CCACTCGTCTCTCCAATCGCCCCAGAGCGGCAGCCTCTGGAAGCGCACAATCGGACACGTGACGGTCCGTCGACG
ACCGGATCGCTGGGGCAGCTCGAGCGCTCTGGTGACGGAGACGGAGCGGGGGGTGGGAGAGGAGAGGGAGATGGA
GAGGGTGGGCGACAAGGACGGGACGAGCGAGGCCATCAAGGAGAGGCCATCGGGCAGCACCGCCAAGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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