Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1956
Gene name
LocationContig_145:26031..26487
Strand+
Gene length (bp)456
Transcript length (bp)399
Coding sequence length (bp)399
Protein length (aa) 133

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0806 0.0456 0.9818 0.0658 0.0422 0.0041 0.076 0.033 0.0771 0.0036

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999717

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6494
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4897
Ophiocordyceps subramaniannii Hirsu2|10537
Ophiocordyceps subramaniannii Hirsu2|1956 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4949

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1956
MVRTSVAVLALIAAGIASAVPAQTWSDGHVSAEALDHMRARAEPNTYPEKRQDTARIESIDRMVTNFRHSLSAKQ
KRQEKVICEATEAENGTEDVITELIQEAGDMPSGDQKRKVKRIVDAIQELSEASKSG*
Coding >Hirsu2|1956
ATGGTCCGTACCAGTGTCGCCGTCCTGGCTCTTATCGCCGCGGGGATAGCCTCTGCTGTTCCGGCCCAGACGTGG
AGCGATGGCCATGTCAGCGCCGAAGCCTTGGATCATATGCGGGCTCGAGCGGAACCCAACACGTACCCCGAGAAG
CGACAGGACACAGCCAGAATAGAGAGCATCGATCGAATGGTCACAAATTTTAGACACTCCCTGTCTGCCAAGCAG
AAGAGGCAAGAAAAGGTGATTTGCGAGGCCACCGAGGCAGAGAACGGGACGGAGGATGTCATTACTGAATTGATT
CAGGAGGCGGGCGACATGCCAAGCGGGGACCAGAAGAGAAAGGTGAAGAGGATCGTCGATGCTATTCAAGAGCTC
TCTGAAGCCAGTAAGAGCGGGTAG
Transcript >Hirsu2|1956
ATGGTCCGTACCAGTGTCGCCGTCCTGGCTCTTATCGCCGCGGGGATAGCCTCTGCTGTTCCGGCCCAGACGTGG
AGCGATGGCCATGTCAGCGCCGAAGCCTTGGATCATATGCGGGCTCGAGCGGAACCCAACACGTACCCCGAGAAG
CGACAGGACACAGCCAGAATAGAGAGCATCGATCGAATGGTCACAAATTTTAGACACTCCCTGTCTGCCAAGCAG
AAGAGGCAAGAAAAGGTGATTTGCGAGGCCACCGAGGCAGAGAACGGGACGGAGGATGTCATTACTGAATTGATT
CAGGAGGCGGGCGACATGCCAAGCGGGGACCAGAAGAGAAAGGTGAAGAGGATCGTCGATGCTATTCAAGAGCTC
TCTGAAGCCAGTAAGAGCGGGTAG
Gene >Hirsu2|1956
ATGGTCCGTACCAGTGTCGCCGTCCTGGCTCGTACGTTTCCGTCTGCTCTTCCTTTCCCATAACATTGATCGTTG
ACTTGATCATCAGTTATCGCCGCGGGGATAGCCTCTGCTGTTCCGGCCCAGACGTGGAGCGATGGCCATGTCAGC
GCCGAAGCCTTGGATCATATGCGGGCTCGAGCGGAACCCAACACGTACCCCGAGAAGCGACAGGACACAGCCAGA
ATAGAGAGCATCGATCGAATGGTCACAAATTTTAGACACTCCCTGTCTGCCAAGCAGAAGAGGCAAGAAAAGGTG
ATTTGCGAGGCCACCGAGGCAGAGAACGGGACGGAGGATGTCATTACTGAATTGATTCAGGAGGCGGGCGACATG
CCAAGCGGGGACCAGAAGAGAAAGGTGAAGAGGATCGTCGATGCTATTCAAGAGCTCTCTGAAGCCAGTAAGAGC
GGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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