Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1949
Gene name
LocationContig_1449:21..222
Strand+
Gene length (bp)201
Transcript length (bp)201
Coding sequence length (bp)201
Protein length (aa) 67

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5722 0.3207 0.1566 0.2643 0.2723 0.0881 0.0871 0.1452 0.1964 0.0087

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup83
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1374
Ophiocordyceps australis 1348a (Ghana) OphauG2|4316
Ophiocordyceps australis map64 (Brazil) OphauB2|1748
Ophiocordyceps australis map64 (Brazil) OphauB2|3388
Ophiocordyceps australis map64 (Brazil) OphauB2|5960
Ophiocordyceps australis map64 (Brazil) OphauB2|7006
Ophiocordyceps camponoti-rufipedis Ophun1|3943
Ophiocordyceps subramaniannii Hirsu2|1949 (this protein)
Ophiocordyceps subramaniannii Hirsu2|556
Ophiocordyceps subramaniannii Hirsu2|7331
Ophiocordyceps subramaniannii Hirsu2|8399
Ophiocordyceps subramaniannii Hirsu2|9233
Ophiocordyceps subramaniannii Hirsu2|9234

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1949
MPAPPTTLPGPLAPVAAPAVPVRRDLIFARDDSALWKFRAGSPSLERAFEHAFGEALKGARAEMGI*
Coding >Hirsu2|1949
ATGCCGGCCCCTCCCACGACGCTGCCGGGTCCGCTCGCTCCCGTTGCGGCGCCTGCTGTTCCTGTCCGGCGCGAC
CTCATCTTTGCGCGCGACGATTCCGCGCTTTGGAAGTTCCGGGCAGGTAGCCCGAGTCTAGAGAGAGCCTTTGAA
CATGCCTTTGGGGAAGCTCTCAAGGGGGCCCGTGCCGAGATGGGCATCTGA
Transcript >Hirsu2|1949
ATGCCGGCCCCTCCCACGACGCTGCCGGGTCCGCTCGCTCCCGTTGCGGCGCCTGCTGTTCCTGTCCGGCGCGAC
CTCATCTTTGCGCGCGACGATTCCGCGCTTTGGAAGTTCCGGGCAGGTAGCCCGAGTCTAGAGAGAGCCTTTGAA
CATGCCTTTGGGGAAGCTCTCAAGGGGGCCCGTGCCGAGATGGGCATCTGA
Gene >Hirsu2|1949
ATGCCGGCCCCTCCCACGACGCTGCCGGGTCCGCTCGCTCCCGTTGCGGCGCCTGCTGTTCCTGTCCGGCGCGAC
CTCATCTTTGCGCGCGACGATTCCGCGCTTTGGAAGTTCCGGGCAGGTAGCCCGAGTCTAGAGAGAGCCTTTGAA
CATGCCTTTGGGGAAGCTCTCAAGGGGGCCCGTGCCGAGATGGGCATCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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