Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1947
Gene name
LocationContig_1448:1356..2637
Strand+
Gene length (bp)1281
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.1342 0.0763 0.4441 0.3719 0.2888 0.2571 0.4643 0.3613 0.2248 0.0154

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.998902

Transmembrane Domains

Domain # Start End Length
1 171 193 22
2 208 230 22
3 332 354 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6048
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3567
Ophiocordyceps australis map64 (Brazil) OphauB2|2225
Ophiocordyceps camponoti-rufipedis Ophun1|5982
Ophiocordyceps subramaniannii Hirsu2|1947 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1947
MLASRYVAAAVSLLWAAARGRPTQQFDQFSSTWHEAVQEIIQRKCLREFNDYKAGLPAQHSQRERVTRVLNCILT
DMSDLYKVNIAASAVVLGSAPMILQALGSTTAETALLGLRRPLLSFLLAAGSPAVATLKSSEFIEMLARFVRGGE
TRNIGLPGFRWRRVHAGLRPAISLAEYVVVGVAATNVVLLAYEMGIHAILVFTPAKTWLPPLWTLLALTIHAGGT
IALHLRVRVAPAEARPGDDPPPTGFMTQEERDEAAAAAAAAAAATSEKKKQRAGGGISIGIGRASSGFSRGGRGG
GGGGWWTVPNEFIPSAFQRPCRLVWRREHAAFYAVSWFLSIVTVAHVLFGTLIFSSLLFFSVRDSVKVVARYAGS
AIVCRAVVRFELAGLTEATTSTRDAATMTAAPVADEEAATRGGLFRADVLG*
Coding >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA
Transcript >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA
Gene >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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