Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1947
Gene name
LocationContig_1448:1356..2637
Strand+
Gene length (bp)1281
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 171 193 22
2 208 230 22
3 332 354 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1947
MLASRYVAAAVSLLWAAARGRPTQQFDQFSSTWHEAVQEIIQRKCLREFNDYKAGLPAQHSQRERVTRVLNCILT
DMSDLYKVNIAASAVVLGSAPMILQALGSTTAETALLGLRRPLLSFLLAAGSPAVATLKSSEFIEMLARFVRGGE
TRNIGLPGFRWRRVHAGLRPAISLAEYVVVGVAATNVVLLAYEMGIHAILVFTPAKTWLPPLWTLLALTIHAGGT
IALHLRVRVAPAEARPGDDPPPTGFMTQEERDEAAAAAAAAAAATSEKKKQRAGGGISIGIGRASSGFSRGGRGG
GGGGWWTVPNEFIPSAFQRPCRLVWRREHAAFYAVSWFLSIVTVAHVLFGTLIFSSLLFFSVRDSVKVVARYAGS
AIVCRAVVRFELAGLTEATTSTRDAATMTAAPVADEEAATRGGLFRADVLG*
Coding >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA
Transcript >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA
Gene >Hirsu2|1947
ATGCTTGCGTCGAGGTACGTGGCGGCGGCGGTGTCGCTGCTGTGGGCGGCGGCGCGCGGACGGCCGACGCAGCAG
TTCGACCAGTTCTCGTCGACGTGGCACGAGGCGGTGCAGGAGATCATCCAGCGCAAGTGCCTGCGCGAGTTCAAC
GACTACAAGGCCGGGCTGCCGGCGCAGCACAGCCAGCGGGAGCGGGTGACGCGGGTGCTCAACTGCATCCTGACC
GACATGAGCGACCTGTACAAGGTCAACATCGCGGCCAGCGCCGTCGTGCTCGGCTCGGCGCCCATGATCCTGCAG
GCGCTGGGCAGCACGACGGCGGAGACGGCGCTGCTGGGCCTGCGCCGGCCGCTGCTGTCCTTCTTGCTGGCGGCC
GGCAGCCCGGCGGTGGCGACGCTCAAGTCGAGCGAGTTCATCGAGATGCTGGCCCGCTTCGTGCGCGGCGGCGAG
ACGCGCAACATCGGCCTGCCGGGCTTCCGCTGGCGCCGCGTCCACGCCGGACTGCGGCCGGCCATCAGCCTGGCC
GAGTACGTCGTGGTCGGCGTCGCCGCCACCAACGTCGTGCTGCTGGCCTACGAGATGGGCATCCACGCCATCCTC
GTCTTCACCCCGGCCAAGACCTGGCTGCCGCCGCTGTGGACCCTGCTGGCGCTGACCATCCACGCCGGCGGCACC
ATCGCCCTGCACCTGCGCGTGCGGGTGGCGCCGGCCGAGGCGCGGCCGGGCGACGACCCGCCACCCACGGGCTTC
ATGACGCAGGAGGAGAGGGACGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGTCGGAGAAGAAGAAG
CAGCGGGCCGGCGGGGGCATCAGCATCGGCATCGGCCGCGCCAGCAGCGGCTTCAGCCGGGGCGGGCGGGGCGGC
GGCGGCGGCGGGTGGTGGACGGTGCCCAACGAGTTCATCCCGTCGGCCTTCCAGCGGCCGTGCCGGCTGGTGTGG
CGGCGGGAGCACGCGGCCTTCTACGCCGTCAGCTGGTTCCTCAGCATCGTCACCGTCGCCCACGTCCTCTTCGGC
ACCCTCATCTTCTCCAGCCTGCTCTTCTTCAGCGTGCGCGACTCGGTCAAGGTGGTGGCGCGCTACGCCGGCAGC
GCCATCGTCTGCCGCGCCGTCGTCCGCTTCGAGCTGGCCGGCCTGACGGAGGCGACGACGTCGACCCGCGACGCC
GCCACCATGACGGCCGCCCCCGTGGCCGACGAGGAGGCTGCGACGCGAGGCGGCCTCTTCCGAGCCGACGTCCTC
GGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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