Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1946
Gene name
LocationContig_1447:25..1577
Strand-
Gene length (bp)1552
Transcript length (bp)1290
Coding sequence length (bp)1290
Protein length (aa) 430

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01545 Cation_efflux Cation efflux family 5.7E-16 292 418

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6Z7K5|MTP3_ORYSJ Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 279 428 4.0E-17
sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 290 428 5.0E-16
sp|Q9LDU0|MTP7_ORYSJ Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 290 428 9.0E-15
sp|Q9M2P2|MTPC3_ARATH Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 290 428 2.0E-14
sp|Q9SAJ7|MTP9_ARATH Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 290 428 8.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6Z7K5|MTP3_ORYSJ Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 279 428 4.0E-17
sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 290 428 5.0E-16
sp|Q9LDU0|MTP7_ORYSJ Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 290 428 9.0E-15
sp|Q9M2P2|MTPC3_ARATH Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 290 428 2.0E-14
sp|Q9SAJ7|MTP9_ARATH Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 290 428 8.0E-13
sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 289 428 3.0E-12
sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 290 428 4.0E-12
sp|Q0DHJ5|MTP6_ORYSJ Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 273 423 5.0E-11
sp|O80632|MTP11_ARATH Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 273 393 5.0E-09
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GO

GO Term Description Terminal node
GO:0008324 cation transmembrane transporter activity Yes
GO:0006812 cation transport Yes
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006811 ion transport No
GO:0015075 ion transmembrane transporter activity No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0022857 transmembrane transporter activity No
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 291 313 22
2 359 381 22
3 396 418 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1946
MSSPSPRGRPIRRPSLLSLDDSYHPYPLSTRTATLASLIRNRSQQSLVGSWPPPTAHKFHHHDDEEAAVPARMRH
DDEDIERLLRDETRLSQILKGPQVRSMNLIGKSNPRYRWERYWKRHDELKAMKKPLRRYYERTNELIQQYMYIDC
LLDSSIPHDLLNEYSAELEASAFRPIDVPATISEEPLAPASLSNSLEQQQQPGPGSYGSVTPASRDSGSGSNGSQ
PPLPQKRTPKDIFRSSESMPLLRHDDGEPVASPVRPPPTGPEGPKPNLPWLEDAEIDSDDPIVTLAIWVNLVANV
VLLVGKILVIISVPSMSVLASLVDATLDFLSTAIVWTTTRLISSGQKDQHRYPVGRRRLEPVGVLVFSVIMVTCF
VQVGLECVQRLAGPEHEILQLGLPAIIIMFSTIVIKGGCWVWCRLVKNSSVRAL*
Coding >Hirsu2|1946
ATGAGCTCCCCGAGCCCGCGCGGCCGCCCGATCCGGAGACCGTCGCTGCTCTCCCTCGACGACTCCTACCACCCC
TATCCCCTGTCGACCCGGACCGCCACCTTGGCCTCTCTGATCCGGAACCGGTCGCAGCAGAGCCTGGTCGGCTCC
TGGCCGCCGCCCACCGCCCACAAGTTCCACCACCACGACGACGAGGAGGCCGCCGTGCCGGCCCGCATGCGCCAT
GACGACGAGGACATCGAGCGCCTGCTGCGCGACGAGACGCGCCTCAGCCAGATCCTCAAGGGGCCCCAGGTCCGG
AGCATGAACCTCATCGGCAAAAGCAACCCTCGCTACCGCTGGGAGCGCTACTGGAAGCGCCACGACGAGCTCAAG
GCCATGAAGAAGCCCCTGCGTCGGTACTACGAGCGGACAAACGAGCTCATCCAGCAGTACATGTACATCGACTGC
CTCCTCGACTCGTCCATCCCCCACGACCTGCTCAACGAGTACTCGGCCGAGCTCGAGGCCTCGGCCTTCCGGCCC
ATCGACGTCCCGGCCACCATCAGCGAGGAGCCCCTCGCGCCGGCCTCCCTCTCCAACTCGCTCGAGCAGCAGCAG
CAGCCCGGCCCGGGCTCCTACGGCTCCGTCACGCCCGCCTCGCGCGACAGCGGCAGCGGCAGCAACGGCTCGCAG
CCGCCGCTGCCGCAGAAGCGCACGCCCAAGGACATCTTCCGCTCGTCGGAGAGCATGCCGCTGCTCCGCCACGAC
GACGGCGAGCCGGTCGCCTCGCCCGTCCGGCCCCCGCCCACCGGGCCCGAGGGCCCCAAGCCCAACCTGCCCTGG
CTCGAGGACGCCGAGATCGACAGCGACGACCCCATCGTGACGCTGGCCATCTGGGTCAACCTCGTCGCCAACGTC
GTTCTCCTGGTCGGCAAGATCCTCGTCATCATCTCCGTCCCGTCCATGTCCGTCCTGGCCAGTCTGGTCGACGCC
ACGCTCGACTTCCTCAGCACCGCCATCGTCTGGACCACGACCCGCCTCATCTCGTCCGGCCAGAAGGACCAGCAT
CGATACCCCGTCGGGCGTCGTCGCCTAGAACCGGTCGGCGTCCTGGTCTTCTCCGTCATCATGGTGACGTGTTTC
GTGCAGGTCGGCCTGGAGTGCGTCCAGCGCCTGGCGGGCCCGGAACATGAGATCCTGCAGCTGGGCCTGCCGGCC
ATCATCATCATGTTCAGCACCATCGTCATCAAGGGCGGCTGCTGGGTCTGGTGCCGATTGGTCAAGAACTCTAGC
GTCAGAGCGCTGTAA
Transcript >Hirsu2|1946
ATGAGCTCCCCGAGCCCGCGCGGCCGCCCGATCCGGAGACCGTCGCTGCTCTCCCTCGACGACTCCTACCACCCC
TATCCCCTGTCGACCCGGACCGCCACCTTGGCCTCTCTGATCCGGAACCGGTCGCAGCAGAGCCTGGTCGGCTCC
TGGCCGCCGCCCACCGCCCACAAGTTCCACCACCACGACGACGAGGAGGCCGCCGTGCCGGCCCGCATGCGCCAT
GACGACGAGGACATCGAGCGCCTGCTGCGCGACGAGACGCGCCTCAGCCAGATCCTCAAGGGGCCCCAGGTCCGG
AGCATGAACCTCATCGGCAAAAGCAACCCTCGCTACCGCTGGGAGCGCTACTGGAAGCGCCACGACGAGCTCAAG
GCCATGAAGAAGCCCCTGCGTCGGTACTACGAGCGGACAAACGAGCTCATCCAGCAGTACATGTACATCGACTGC
CTCCTCGACTCGTCCATCCCCCACGACCTGCTCAACGAGTACTCGGCCGAGCTCGAGGCCTCGGCCTTCCGGCCC
ATCGACGTCCCGGCCACCATCAGCGAGGAGCCCCTCGCGCCGGCCTCCCTCTCCAACTCGCTCGAGCAGCAGCAG
CAGCCCGGCCCGGGCTCCTACGGCTCCGTCACGCCCGCCTCGCGCGACAGCGGCAGCGGCAGCAACGGCTCGCAG
CCGCCGCTGCCGCAGAAGCGCACGCCCAAGGACATCTTCCGCTCGTCGGAGAGCATGCCGCTGCTCCGCCACGAC
GACGGCGAGCCGGTCGCCTCGCCCGTCCGGCCCCCGCCCACCGGGCCCGAGGGCCCCAAGCCCAACCTGCCCTGG
CTCGAGGACGCCGAGATCGACAGCGACGACCCCATCGTGACGCTGGCCATCTGGGTCAACCTCGTCGCCAACGTC
GTTCTCCTGGTCGGCAAGATCCTCGTCATCATCTCCGTCCCGTCCATGTCCGTCCTGGCCAGTCTGGTCGACGCC
ACGCTCGACTTCCTCAGCACCGCCATCGTCTGGACCACGACCCGCCTCATCTCGTCCGGCCAGAAGGACCAGCAT
CGATACCCCGTCGGGCGTCGTCGCCTAGAACCGGTCGGCGTCCTGGTCTTCTCCGTCATCATGGTGACGTGTTTC
GTGCAGGTCGGCCTGGAGTGCGTCCAGCGCCTGGCGGGCCCGGAACATGAGATCCTGCAGCTGGGCCTGCCGGCC
ATCATCATCATGTTCAGCACCATCGTCATCAAGGGCGGCTGCTGGGTCTGGTGCCGATTGGTCAAGAACTCTAGC
GTCAGAGCGCTGTAA
Gene >Hirsu2|1946
ATGAGCTCCCCGAGCCCGCGCGGCCGCCCGATCCGGAGACCGTCGCTGCTCTCCCTCGACGACTCCTACCACCCC
TATCCCCTGTCGACCCGGACCGCCACCTTGGCCTCTCTGATCCGGAACCGGTCGCAGCAGAGCCTGGTCGGCTCC
TGGCCGCCGCCCACCGCCCACAAGTTCCACCACCACGACGACGAGGAGGCCGCCGTGCCGGCCCGCATGCGCCAT
GACGACGAGGACATCGAGCGCCTGCTGCGCGACGAGACGCGCCTCAGCCAGATCCTCAAGGGGCCCCAGGTCCGG
AGCATGAACCTCATCGGCAAAAGCAACCCTCGCTACCGCTGGGAGCGCTACTGGAAGCGCCACGACGAGCTCAAG
GCCATGAAGAAGCCCCTGTGAGACGAACCACCACGCTTTGCTTCTTCCGCCTCTTCCACCGTCCGAGTCCGCCCA
CTGACGCCGCAGCTTGCCGCGGACAAAAACGGGGGGGGGCAAAAAAAAAAAGGCGTCGGTACTACGAGCGGACAA
ACGAGCTCATCCAGCAGTACATGTACATCGACTGCCTCCTCGACTCGTCCATCCCCCACGACCTGCTCAACGAGT
ACTCGGCCGAGCTCGAGGCCTCGGCCTTCCGGCCCATCGACGTCCCGGCCACCATCAGCGAGGAGCCCCTCGCGC
CGGCCTCCCTCTCCAACTCGCTCGAGCAGCAGCAGCAGCCCGGCCCGGGCTCCTACGGCTCCGTCACGCCCGCCT
CGCGCGACAGCGGCAGCGGCAGCAACGGCTCGCAGCCGCCGCTGCCGCAGAAGCGCACGCCCAAGGACATCTTCC
GCTCGTCGGAGAGCATGCCGCTGCTCCGCCACGACGACGGCGAGCCGGTCGCCTCGCCCGTCCGGCCCCCGCCCA
CCGGGCCCGAGGGCCCCAAGCCCAACCTGCCCTGGCTCGAGGACGCCGAGATCGACAGCGACGACCCCATCGTGA
CGCTGGCCATCTGGGTCAACCTCGTCGCCAACGTCGTTCTCCTGGTCGGCAAGATCCTCGTCATCATCTCCGTCC
CGTCCATGTCCGTCCTGGCCAGTCTGGTCGACGCCACGCTCGACTTCCTCAGCACCGCCATCGTCTGGACCACGA
CCCGCCTCATCTCGTCCGGCCAGAAGGACCAGCATCGATACCCCGTCGGGCGTCGTCGGTAAGTACTTGCACACA
CACACACATACATACACACGGCGACCCAATTGGCCCCACTGCCGCCGTTGCCGCCTTCGCCGCCGCCGCCGCCGC
CGCAGCACCGGCGCCGGCCGCCCCGGAACGACCGGCTCGCTAACACGTGCGCTTGTCCAGCCTAGAACCGGTCGG
CGTCCTGGTCTTCTCCGTCATCATGGTGACGTGTTTCGTGCAGGTCGGCCTGGAGTGCGTCCAGCGCCTGGCGGG
CCCGGAACATGAGATCCTGCAGCTGGGCCTGCCGGCCATCATCATCATGTTCAGCACCATCGTCATCAAGGGCGG
CTGCTGGGTCTGGTGCCGATTGGTCAAGAACTCTAGCGTCAGAGCGCTGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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