Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1935
Gene name
LocationContig_1442:3830..4901
Strand+
Gene length (bp)1071
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 1.7E-08 132 178

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1935
MPHYKPLQAILLTTLICLLLLWLSSPIAPPRFRLRPAAARPATPPARSSHLDEIPNDVHFVFLLEKAGADFPFEF
HQFLCIYAAWFHLQPGRLFLHTNAGAEQIQRAKQGQAGKWSRLIFEMPGLTVNPVESPTVTNKGVKIKHVAHKSD
FIRVQVLRQFGGLYLDLDVFVIRDLRPLMASGFQSVSGREVGGLMTAGAFLAKRDCRLLQMWEKEMHEVFDQGWT
THSNGLMTRIGERLIPEPWEILLLEQDALSPVHWDPPGAEEFIESHPDVASPVEGLHEGDHLPLLQHYDEPGGPW
AMNFNKSYAIHAFRVEEVGMEVSPGSVLERRSNIGRALYPVVRDMYHRGLVTLQEK*
Coding >Hirsu2|1935
ATGCCACATTATAAGCCCTTGCAGGCCATCCTGCTCACCACCCTCATCTGCCTGCTCCTGCTCTGGCTCTCGTCT
CCGATTGCGCCTCCCAGGTTCCGGCTGCGCCCGGCCGCGGCCCGGCCGGCGACGCCGCCGGCGCGATCGTCGCAC
CTGGACGAGATCCCCAACGACGTCCACTTCGTCTTCCTGCTGGAAAAGGCCGGGGCCGACTTCCCGTTCGAATTC
CACCAGTTCCTCTGCATCTACGCCGCCTGGTTCCATCTTCAGCCCGGCCGGCTCTTCCTGCACACCAACGCCGGC
GCCGAGCAGATCCAGCGGGCCAAGCAGGGGCAGGCCGGCAAGTGGTCGCGTCTGATATTCGAGATGCCTGGCCTG
ACGGTCAACCCGGTCGAGAGCCCGACCGTGACGAACAAGGGCGTCAAGATCAAGCACGTCGCCCACAAGTCCGAC
TTCATCCGCGTCCAGGTCCTGCGCCAGTTCGGCGGCCTGTACCTGGACCTCGACGTCTTCGTCATCCGCGACCTC
CGGCCGCTCATGGCGTCCGGCTTCCAGTCCGTCAGCGGGCGCGAGGTGGGCGGCCTCATGACCGCCGGCGCGTTC
CTCGCAAAGAGGGACTGCCGGCTTCTGCAGATGTGGGAAAAGGAGATGCACGAAGTCTTCGACCAGGGCTGGACG
ACGCACTCCAACGGGCTGATGACGCGCATCGGCGAGCGCCTCATCCCCGAGCCGTGGGAGATATTGTTGCTGGAG
CAGGACGCCCTGTCGCCCGTCCACTGGGACCCGCCCGGCGCCGAGGAATTCATCGAGTCTCACCCGGACGTCGCC
TCACCCGTCGAGGGCCTCCACGAAGGCGACCATCTGCCGCTGCTGCAGCACTACGACGAGCCGGGCGGGCCGTGG
GCCATGAACTTCAACAAGTCGTACGCCATCCACGCCTTCCGAGTCGAGGAGGTCGGTATGGAGGTCTCGCCAGGC
AGCGTGCTGGAGAGGCGAAGCAACATCGGCCGGGCTCTGTACCCCGTCGTGAGAGACATGTATCACCGGGGGCTC
GTGACGTTACAGGAGAAGTGA
Transcript >Hirsu2|1935
ATGCCACATTATAAGCCCTTGCAGGCCATCCTGCTCACCACCCTCATCTGCCTGCTCCTGCTCTGGCTCTCGTCT
CCGATTGCGCCTCCCAGGTTCCGGCTGCGCCCGGCCGCGGCCCGGCCGGCGACGCCGCCGGCGCGATCGTCGCAC
CTGGACGAGATCCCCAACGACGTCCACTTCGTCTTCCTGCTGGAAAAGGCCGGGGCCGACTTCCCGTTCGAATTC
CACCAGTTCCTCTGCATCTACGCCGCCTGGTTCCATCTTCAGCCCGGCCGGCTCTTCCTGCACACCAACGCCGGC
GCCGAGCAGATCCAGCGGGCCAAGCAGGGGCAGGCCGGCAAGTGGTCGCGTCTGATATTCGAGATGCCTGGCCTG
ACGGTCAACCCGGTCGAGAGCCCGACCGTGACGAACAAGGGCGTCAAGATCAAGCACGTCGCCCACAAGTCCGAC
TTCATCCGCGTCCAGGTCCTGCGCCAGTTCGGCGGCCTGTACCTGGACCTCGACGTCTTCGTCATCCGCGACCTC
CGGCCGCTCATGGCGTCCGGCTTCCAGTCCGTCAGCGGGCGCGAGGTGGGCGGCCTCATGACCGCCGGCGCGTTC
CTCGCAAAGAGGGACTGCCGGCTTCTGCAGATGTGGGAAAAGGAGATGCACGAAGTCTTCGACCAGGGCTGGACG
ACGCACTCCAACGGGCTGATGACGCGCATCGGCGAGCGCCTCATCCCCGAGCCGTGGGAGATATTGTTGCTGGAG
CAGGACGCCCTGTCGCCCGTCCACTGGGACCCGCCCGGCGCCGAGGAATTCATCGAGTCTCACCCGGACGTCGCC
TCACCCGTCGAGGGCCTCCACGAAGGCGACCATCTGCCGCTGCTGCAGCACTACGACGAGCCGGGCGGGCCGTGG
GCCATGAACTTCAACAAGTCGTACGCCATCCACGCCTTCCGAGTCGAGGAGGTCGGTATGGAGGTCTCGCCAGGC
AGCGTGCTGGAGAGGCGAAGCAACATCGGCCGGGCTCTGTACCCCGTCGTGAGAGACATGTATCACCGGGGGCTC
GTGACGTTACAGGAGAAGTGA
Gene >Hirsu2|1935
ATGCCACATTATAAGCCCTTGCAGGCCATCCTGCTCACCACCCTCATCTGCCTGCTCCTGCTCTGGCTCTCGTCT
CCGATTGCGCCTCCCAGGTTCCGGCTGCGCCCGGCCGCGGCCCGGCCGGCGACGCCGCCGGCGCGATCGTCGCAC
CTGGACGAGATCCCCAACGACGTCCACTTCGTCTTCCTGCTGGAAAAGGCCGGGGCCGACTTCCCGTTCGAATTC
CACCAGTTCCTCTGCATCTACGCCGCCTGGTTCCATCTTCAGCCCGGCCGGCTCTTCCTGCACACCAACGCCGGC
GCCGAGCAGATCCAGCGGGCCAAGCAGGGGCAGGCCGGCAAGTGGTCGCGTCTGATATTCGAGATGCCTGGCCTG
ACGGTCAACCCGGTCGAGAGCCCGACCGTGACGAACAAGGGCGTCAAGATCAAGCACGTCGCCCACAAGTCCGAC
TTCATCCGCGTCCAGGTCCTGCGCCAGTTCGGCGGCCTGTACCTGGACCTCGACGTCTTCGTCATCCGCGACCTC
CGGCCGCTCATGGCGTCCGGCTTCCAGTCCGTCAGCGGGCGCGAGGTGGGCGGCCTCATGACCGCCGGCGCGTTC
CTCGCAAAGAGGGACTGCCGGCTTCTGCAGATGTGGGAAAAGGAGATGCACGAAGTCTTCGACCAGGGCTGGACG
ACGCACTCCAACGGGCTGATGACGCGCATCGGCGAGCGCCTCATCCCCGAGCCGTGGGAGATATTGTTGCTGGAG
CAGGACGCCCTGTCGCCCGTCCACTGGGACCCGCCCGGCGCCGAGGAATTCATCGAGTCTCACCCGGACGTCGCC
TCACCCGTCGAGGGCCTCCACGAAGGCGACCATCTGCCGCTGCTGCAGCACTACGACGAGCCGGGCGGGCCGTGG
GCCATGAACTTCAACAAGTCGTACGCCATCCACGCCTTCCGAGTCGAGGAGGTCGGTATGGAGGTCTCGCCAGGC
AGCGTGCTGGAGAGGCGAAGCAACATCGGCCGGGCTCTGTACCCCGTCGTGAGAGACATGTATCACCGGGGGCTC
GTGACGTTACAGGAGAAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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