Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1919
Gene name
LocationContig_144:3816..5371
Strand-
Gene length (bp)1555
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 420 442 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1919
MSSVNGSSAASCVGLGAPVSEPLSRTLLSSTLSSYSLSSAASSSAAASRHSSHVSKTYRQASTLFLTRRLPEALT
TLSPLITPPPENGEPAPVARSSRTTRIKVWSLYLTILNAVLEMEPDEGKEAFGNQEWRALCAKVRDGHVWEEVVR
HGYHGVEGDVDSDVVINLATLLLAHARDQTLNQRKLETYLATSNAPSLDLAGHLAGSPAPASRMGRRYRSPAPGT
SGADTPRDLNARVKILELYTLHVLLRNNEWDYAREFISVSSVLDDERREAFLQALQSLQEEQLEQERRERQERQR
QEEQLRRDIEDARRLRAENEERERRRLEEEEERRTRRPSSEVDYGVESNDENATRRGRQHQQQKQQQHQQQQRPS
RASLSRPDAKAAAVPPTFTARAAIILSRLRLLVDRLAATLNGNPALMVRLMAFIVGLLVMLGHGGIRQRMQRILA
ASWSKVKATAGMGTKVSYI*
Coding >Hirsu2|1919
ATGTCCTCGGTCAACGGCTCGTCGGCGGCGTCGTGCGTCGGCCTCGGCGCCCCGGTGTCGGAGCCGCTGTCGCGC
ACCCTCCTCTCCTCCACCCTCTCCTCCTACTCCCTCTCCTCGGCCGCCTCGAGCTCGGCCGCCGCCTCCCGCCAT
TCCTCGCACGTTTCCAAGACATACCGCCAGGCATCGACCCTCTTCCTGACGCGCCGCCTGCCCGAAGCCCTGACG
ACGCTGAGCCCGCTCATCACCCCGCCGCCCGAGAATGGCGAGCCCGCGCCAGTGGCTCGCTCCTCGCGCACCACC
CGCATCAAGGTCTGGAGCCTGTACCTGACCATTCTCAATGCCGTGCTCGAGATGGAACCCGACGAGGGCAAGGAG
GCCTTCGGCAACCAGGAATGGAGGGCACTGTGCGCCAAGGTTCGAGATGGCCATGTCTGGGAGGAGGTGGTGCGC
CACGGCTACCACGGAGTCGAGGGAGACGTCGACTCCGACGTTGTCATCAACCTGGCCACGCTGCTGTTGGCGCAT
GCGCGCGACCAGACTCTGAACCAGCGCAAGCTGGAGACCTATCTGGCCACGTCCAACGCACCCAGCCTTGACCTG
GCCGGCCACCTCGCCGGGTCGCCCGCCCCGGCGTCCCGCATGGGCCGCCGCTACCGGTCACCGGCCCCCGGCACG
AGCGGCGCTGACACCCCCCGCGACCTCAACGCCCGCGTCAAGATCCTGGAGCTGTACACGCTGCACGTCCTGCTC
CGGAACAACGAGTGGGACTACGCCCGCGAGTTCATCAGCGTCAGCTCCGTCCTCGACGACGAGCGACGGGAAGCC
TTCCTGCAGGCCCTCCAGAGCCTGCAGGAGGAGCAGCTGGAACAAGAGCGCCGCGAGCGGCAGGAGCGCCAGCGG
CAGGAGGAGCAACTGCGCCGGGACATCGAAGACGCCAGGCGGCTGCGAGCCGAGAACGAGGAGCGGGAAAGGAGA
CGACTGGAGGAGGAGGAAGAGCGGCGTACGCGGCGCCCGAGCTCCGAGGTCGACTACGGCGTCGAGTCGAACGAC
GAAAACGCCACCCGCCGCGGGCGCCAGCACCAGCAGCAAAAACAGCAGCAGCACCAGCAGCAACAACGGCCGTCG
CGCGCCTCCCTCTCCCGACCCGACGCCAAGGCGGCCGCCGTGCCCCCCACGTTCACGGCACGCGCCGCCATCATC
CTATCGCGGCTGCGGCTCTTGGTGGACCGGCTCGCGGCCACGCTCAACGGGAACCCCGCGCTGATGGTGAGGCTG
ATGGCCTTCATCGTAGGCCTGCTCGTCATGCTCGGCCACGGGGGCATCCGACAGCGGATGCAGCGCATACTGGCC
GCGTCCTGGAGCAAGGTCAAGGCCACGGCGGGCATGGGCACCAAGGTCAGCTACATCTGA
Transcript >Hirsu2|1919
ATGTCCTCGGTCAACGGCTCGTCGGCGGCGTCGTGCGTCGGCCTCGGCGCCCCGGTGTCGGAGCCGCTGTCGCGC
ACCCTCCTCTCCTCCACCCTCTCCTCCTACTCCCTCTCCTCGGCCGCCTCGAGCTCGGCCGCCGCCTCCCGCCAT
TCCTCGCACGTTTCCAAGACATACCGCCAGGCATCGACCCTCTTCCTGACGCGCCGCCTGCCCGAAGCCCTGACG
ACGCTGAGCCCGCTCATCACCCCGCCGCCCGAGAATGGCGAGCCCGCGCCAGTGGCTCGCTCCTCGCGCACCACC
CGCATCAAGGTCTGGAGCCTGTACCTGACCATTCTCAATGCCGTGCTCGAGATGGAACCCGACGAGGGCAAGGAG
GCCTTCGGCAACCAGGAATGGAGGGCACTGTGCGCCAAGGTTCGAGATGGCCATGTCTGGGAGGAGGTGGTGCGC
CACGGCTACCACGGAGTCGAGGGAGACGTCGACTCCGACGTTGTCATCAACCTGGCCACGCTGCTGTTGGCGCAT
GCGCGCGACCAGACTCTGAACCAGCGCAAGCTGGAGACCTATCTGGCCACGTCCAACGCACCCAGCCTTGACCTG
GCCGGCCACCTCGCCGGGTCGCCCGCCCCGGCGTCCCGCATGGGCCGCCGCTACCGGTCACCGGCCCCCGGCACG
AGCGGCGCTGACACCCCCCGCGACCTCAACGCCCGCGTCAAGATCCTGGAGCTGTACACGCTGCACGTCCTGCTC
CGGAACAACGAGTGGGACTACGCCCGCGAGTTCATCAGCGTCAGCTCCGTCCTCGACGACGAGCGACGGGAAGCC
TTCCTGCAGGCCCTCCAGAGCCTGCAGGAGGAGCAGCTGGAACAAGAGCGCCGCGAGCGGCAGGAGCGCCAGCGG
CAGGAGGAGCAACTGCGCCGGGACATCGAAGACGCCAGGCGGCTGCGAGCCGAGAACGAGGAGCGGGAAAGGAGA
CGACTGGAGGAGGAGGAAGAGCGGCGTACGCGGCGCCCGAGCTCCGAGGTCGACTACGGCGTCGAGTCGAACGAC
GAAAACGCCACCCGCCGCGGGCGCCAGCACCAGCAGCAAAAACAGCAGCAGCACCAGCAGCAACAACGGCCGTCG
CGCGCCTCCCTCTCCCGACCCGACGCCAAGGCGGCCGCCGTGCCCCCCACGTTCACGGCACGCGCCGCCATCATC
CTATCGCGGCTGCGGCTCTTGGTGGACCGGCTCGCGGCCACGCTCAACGGGAACCCCGCGCTGATGGTGAGGCTG
ATGGCCTTCATCGTAGGCCTGCTCGTCATGCTCGGCCACGGGGGCATCCGACAGCGGATGCAGCGCATACTGGCC
GCGTCCTGGAGCAAGGTCAAGGCCACGGCGGGCATGGGCACCAAGGTCAGCTACATCTGA
Gene >Hirsu2|1919
ATGTCCTCGGTCAACGGCTCGTCGGCGGCGTCGTGCGTCGGCCTCGGCGCCCCGGTGTCGGAGCCGCTGTCGCGC
ACCCTCCTCTCCTCCACCCTCTCCTCCTACTCCCTCTCCTCGGCCGCCTCGAGCTCGGCCGCCGCCTCCCGCCAT
TCCTCGCACGTTTCCAAGACATACCGCCAGGCATCGACCCTCTTCCTGACGCGCCGCCTGCCCGAAGCCCTGACG
ACGCTGAGCCCGCTCATCACCCCGCCGCCCGAGAATGGCGAGCCCGCGCCAGTGGCTCGCTCCTCGCGCACCACC
CGCATCAAGGTCTGGAGCCTGTACCTGACCATTCTCAATGCCGTGCTCGAGATGGAACCCGACGAGGGCAAGGAG
GCCTTCGGCAACCAGGAATGGAGGGCACTGTGCGCCAAGGTTCGAGATGGCCATGTCTGGGAGGAGGTGGTGCGC
CACGGCTACCACGGAGTCGAGGGAGACGTCGACTCCGACGTTGTCATCAACCTGTGAGTCTCCCTCTCCCGTCTC
CCCCTGTCCCTTCCTCCCTCCCCTTCCTCCGGCCGCTCTCCTGCCATTTCTCGTCCGCCTCTGCGCCCGGAGCAC
GCCATCGACGACGTCGACGACGGCCGCCCCATGCTGATGGATGCCAAGGGCCACGCTGCTGTTGGCGCATGCGCG
CGACCAGACTCTGAACCAGCGCAAGCTGGAGACCTATCTGGCCACGTCCAACGCACCCAGCCTTGACCTGGCCGG
CCACCTCGCCGGGTCGCCCGCCCCGGCGTCCCGCATGGGCCGCCGCTACCGGTCACCGGCCCCCGGCACGAGCGG
CGCTGACACCCCCCGCGACCTCAACGCCCGCGTCAAGATCCTGGAGCTGTACACGCTGCACGTCCTGCTCCGGAA
CAACGAGTGGGACTACGCCCGCGAGTTCATCAGCGTCAGCTCCGTCCTCGACGACGAGCGACGGGAAGCCTTCCT
GCAGGCCCTCCAGAGCCTGCAGGAGGAGCAGCTGGAACAAGAGCGCCGCGAGCGGCAGGAGCGCCAGCGGCAGGA
GGAGCAACTGCGCCGGGACATCGAAGACGCCAGGCGGCTGCGAGCCGAGAACGAGGAGCGGGAAAGGAGACGACT
GGAGGAGGAGGAAGAGCGGCGTACGCGGCGCCCGAGCTCCGAGGTCGACTACGGCGTCGAGTCGAACGACGAAAA
CGCCACCCGCCGCGGGCGCCAGCACCAGCAGCAAAAACAGCAGCAGCACCAGCAGCAACAACGGCCGTCGCGCGC
CTCCCTCTCCCGACCCGACGCCAAGGCGGCCGCCGTGCCCCCCACGTTCACGGCACGCGCCGCCATCATCCTATC
GCGGCTGCGGCTCTTGGTGGACCGGCTCGCGGCCACGCTCAACGGGAACCCCGCGCTGATGGTGAGGCTGATGGC
CTTCATCGTAGGCCTGCTCGTCATGCTCGGCCACGGGGGCATCCGACAGCGGATGCAGCGCATACTGGCCGCGTC
CTGGAGCAAGGTCAAGGCCACGGCGGGCATGGGCACCAAGGTCAGCTACATCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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