Protein ID | Hirsu2|1908 |
Gene name | |
Location | Contig_1437:1158..3177 |
Strand | + |
Gene length (bp) | 2019 |
Transcript length (bp) | 2019 |
Coding sequence length (bp) | 2019 |
Protein length (aa) | 673 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11374 | DUF3176 | Protein of unknown function (DUF3176) | 8.8E-28 | 36 | 150 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 15 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
2 | 50 | 72 | 22 |
3 | 125 | 147 | 22 |
4 | 562 | 584 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1908 MGKQAKGRRGLRALVAWAAELAALAAAVAIVAAIAVMLVRYDGQKVPEWQWSVGLNAVVALLTLGMRAALALVAT EVISQAKWMWFARGPQRLAYFQLLDEASRGFLGSVKLVGLARVGFRGSPVVVVAAAAAVTSVLSLAIGPFTQQAI RTVPCLRPAPEYEARVPVAVALPGSDGSFTFPYDISKRPVLPGVGPRAQGTIVSAIANPGGGGGGIVRPLCPTGN CTFPETLGVPHSTIALCARCLDTTPLLRQAPNRSVIWLGSGNGNDSRHGQVALSADGWKKLVAGPGGGGFPNLSF AEPVMTAEFRATVELALATFSVLTWTRARDARCDNNRLEPFDSPSCFVAATCSYYACTKDIQVRVADGQLQETMT NPVAAQSNFTLEALREGYTNLFVVKSPCLVDGQVYDASNFSRIPGDGRTRLMAVSTADRHGMVRAPSECVYSVSG SYAAGLGLLLSQVFSGHCDSVPMASEKRGYVFCDEHWWLQQLYHRGNASFRSLDGMVQGVAAAVTDFFRVDGWGP IDDRGNNPAEGGPDREHARAHLRGEAHRSTVCIRLDWAWLLPAGAICLTTAALLVAMLAMNATGGRGGAPVWKSS ALPLLFSGLALGRRPDEADDELDSLRRRAESAVASLRRDGGSARSVLVVVEEPEAEQTSASPRHEAGGTPRR* |
Coding | >Hirsu2|1908 ATGGGGAAGCAAGCCAAGGGGCGGCGAGGGCTGCGGGCGCTCGTCGCGTGGGCGGCCGAGCTGGCGGCGCTGGCG GCCGCCGTCGCCATCGTGGCCGCCATCGCCGTCATGCTGGTGCGCTACGACGGGCAGAAGGTGCCGGAGTGGCAG TGGAGCGTCGGCCTCAACGCCGTCGTCGCGCTGCTCACGCTCGGCATGCGGGCGGCGCTGGCGCTGGTCGCGACC GAGGTCATCAGCCAGGCCAAGTGGATGTGGTTCGCCCGGGGCCCGCAGCGGCTGGCCTACTTCCAGCTCCTCGAC GAGGCCAGCCGCGGCTTCCTGGGCTCCGTCAAGCTCGTCGGCCTGGCGCGCGTCGGCTTCCGCGGCAGCCCGGTC GTCGTCGTCGCCGCCGCCGCCGCCGTCACGTCCGTCCTCAGCCTGGCCATCGGGCCCTTCACCCAGCAGGCGATC CGCACGGTGCCGTGCCTCCGCCCGGCGCCCGAGTACGAGGCTCGGGTGCCGGTGGCCGTGGCCTTGCCCGGCTCC GACGGCTCCTTCACCTTCCCCTACGACATCAGCAAGCGCCCGGTGCTGCCGGGCGTCGGGCCCCGGGCCCAGGGC ACCATCGTCTCGGCCATCGCCAACCCGGGAGGCGGCGGCGGCGGCATCGTCCGGCCGCTATGCCCGACGGGCAAC TGCACCTTTCCCGAGACGCTCGGCGTGCCGCACTCGACCATCGCCTTGTGCGCCCGCTGCCTGGACACGACGCCG CTGCTGCGGCAGGCGCCCAATCGCAGCGTGATCTGGCTCGGCTCCGGTAACGGCAACGACTCCCGCCACGGCCAG GTGGCGCTCTCGGCGGACGGGTGGAAGAAGTTGGTGGCCGGTCCGGGCGGCGGCGGCTTCCCCAACCTGTCGTTC GCGGAGCCGGTCATGACGGCCGAGTTCCGGGCCACCGTCGAGTTGGCGCTCGCCACCTTTTCCGTCCTGACCTGG ACGCGCGCCCGGGACGCGCGCTGCGACAACAACCGCCTCGAGCCGTTCGACAGCCCAAGCTGCTTCGTCGCCGCC ACCTGCTCCTACTACGCCTGCACCAAGGATATCCAGGTCAGGGTGGCGGACGGGCAGCTGCAGGAGACGATGACG AACCCAGTCGCGGCGCAGAGCAACTTCACGCTCGAGGCATTGCGCGAGGGCTACACGAACTTGTTCGTCGTCAAG AGCCCCTGCCTGGTGGACGGGCAGGTCTACGACGCGTCCAACTTCTCGCGGATCCCCGGCGACGGCCGGACAAGG CTGATGGCGGTGTCGACGGCCGACCGGCATGGGATGGTGCGCGCGCCGTCCGAGTGCGTGTACAGTGTGTCGGGC AGCTACGCCGCCGGCCTGGGCCTCCTCCTCTCGCAGGTCTTCTCGGGCCACTGCGACAGCGTGCCGATGGCGTCG GAGAAGCGCGGCTACGTCTTCTGCGACGAGCACTGGTGGCTGCAGCAGCTGTACCACCGCGGCAACGCCTCCTTC CGCTCGCTCGACGGGATGGTGCAGGGCGTCGCCGCGGCCGTGACCGACTTCTTCCGCGTCGACGGTTGGGGCCCC ATCGACGACCGCGGCAACAACCCGGCCGAGGGGGGGCCCGACCGGGAGCACGCGCGCGCCCACCTGCGCGGCGAA GCCCACCGCAGCACCGTCTGCATCCGCCTCGACTGGGCCTGGCTGCTGCCGGCGGGGGCAATCTGCCTGACGACG GCGGCGCTGCTGGTCGCCATGCTCGCCATGAACGCCACGGGCGGCCGAGGCGGAGCGCCGGTCTGGAAGTCGAGT GCGCTACCGCTGCTGTTCTCCGGACTCGCGCTCGGCCGCCGCCCGGATGAGGCCGACGACGAGCTGGACAGCCTG CGCCGGCGGGCCGAGAGCGCCGTGGCAAGCCTGCGCCGGGACGGTGGGTCGGCGAGGAGCGTCCTGGTCGTCGTC GAGGAGCCGGAGGCCGAGCAGACGTCGGCAAGCCCGCGGCACGAGGCGGGCGGCACGCCGCGTCGGTGA |
Transcript | >Hirsu2|1908 ATGGGGAAGCAAGCCAAGGGGCGGCGAGGGCTGCGGGCGCTCGTCGCGTGGGCGGCCGAGCTGGCGGCGCTGGCG GCCGCCGTCGCCATCGTGGCCGCCATCGCCGTCATGCTGGTGCGCTACGACGGGCAGAAGGTGCCGGAGTGGCAG TGGAGCGTCGGCCTCAACGCCGTCGTCGCGCTGCTCACGCTCGGCATGCGGGCGGCGCTGGCGCTGGTCGCGACC GAGGTCATCAGCCAGGCCAAGTGGATGTGGTTCGCCCGGGGCCCGCAGCGGCTGGCCTACTTCCAGCTCCTCGAC GAGGCCAGCCGCGGCTTCCTGGGCTCCGTCAAGCTCGTCGGCCTGGCGCGCGTCGGCTTCCGCGGCAGCCCGGTC GTCGTCGTCGCCGCCGCCGCCGCCGTCACGTCCGTCCTCAGCCTGGCCATCGGGCCCTTCACCCAGCAGGCGATC CGCACGGTGCCGTGCCTCCGCCCGGCGCCCGAGTACGAGGCTCGGGTGCCGGTGGCCGTGGCCTTGCCCGGCTCC GACGGCTCCTTCACCTTCCCCTACGACATCAGCAAGCGCCCGGTGCTGCCGGGCGTCGGGCCCCGGGCCCAGGGC ACCATCGTCTCGGCCATCGCCAACCCGGGAGGCGGCGGCGGCGGCATCGTCCGGCCGCTATGCCCGACGGGCAAC TGCACCTTTCCCGAGACGCTCGGCGTGCCGCACTCGACCATCGCCTTGTGCGCCCGCTGCCTGGACACGACGCCG CTGCTGCGGCAGGCGCCCAATCGCAGCGTGATCTGGCTCGGCTCCGGTAACGGCAACGACTCCCGCCACGGCCAG GTGGCGCTCTCGGCGGACGGGTGGAAGAAGTTGGTGGCCGGTCCGGGCGGCGGCGGCTTCCCCAACCTGTCGTTC GCGGAGCCGGTCATGACGGCCGAGTTCCGGGCCACCGTCGAGTTGGCGCTCGCCACCTTTTCCGTCCTGACCTGG ACGCGCGCCCGGGACGCGCGCTGCGACAACAACCGCCTCGAGCCGTTCGACAGCCCAAGCTGCTTCGTCGCCGCC ACCTGCTCCTACTACGCCTGCACCAAGGATATCCAGGTCAGGGTGGCGGACGGGCAGCTGCAGGAGACGATGACG AACCCAGTCGCGGCGCAGAGCAACTTCACGCTCGAGGCATTGCGCGAGGGCTACACGAACTTGTTCGTCGTCAAG AGCCCCTGCCTGGTGGACGGGCAGGTCTACGACGCGTCCAACTTCTCGCGGATCCCCGGCGACGGCCGGACAAGG CTGATGGCGGTGTCGACGGCCGACCGGCATGGGATGGTGCGCGCGCCGTCCGAGTGCGTGTACAGTGTGTCGGGC AGCTACGCCGCCGGCCTGGGCCTCCTCCTCTCGCAGGTCTTCTCGGGCCACTGCGACAGCGTGCCGATGGCGTCG GAGAAGCGCGGCTACGTCTTCTGCGACGAGCACTGGTGGCTGCAGCAGCTGTACCACCGCGGCAACGCCTCCTTC CGCTCGCTCGACGGGATGGTGCAGGGCGTCGCCGCGGCCGTGACCGACTTCTTCCGCGTCGACGGTTGGGGCCCC ATCGACGACCGCGGCAACAACCCGGCCGAGGGGGGGCCCGACCGGGAGCACGCGCGCGCCCACCTGCGCGGCGAA GCCCACCGCAGCACCGTCTGCATCCGCCTCGACTGGGCCTGGCTGCTGCCGGCGGGGGCAATCTGCCTGACGACG GCGGCGCTGCTGGTCGCCATGCTCGCCATGAACGCCACGGGCGGCCGAGGCGGAGCGCCGGTCTGGAAGTCGAGT GCGCTACCGCTGCTGTTCTCCGGACTCGCGCTCGGCCGCCGCCCGGATGAGGCCGACGACGAGCTGGACAGCCTG CGCCGGCGGGCCGAGAGCGCCGTGGCAAGCCTGCGCCGGGACGGTGGGTCGGCGAGGAGCGTCCTGGTCGTCGTC GAGGAGCCGGAGGCCGAGCAGACGTCGGCAAGCCCGCGGCACGAGGCGGGCGGCACGCCGCGTCGGTGA |
Gene | >Hirsu2|1908 ATGGGGAAGCAAGCCAAGGGGCGGCGAGGGCTGCGGGCGCTCGTCGCGTGGGCGGCCGAGCTGGCGGCGCTGGCG GCCGCCGTCGCCATCGTGGCCGCCATCGCCGTCATGCTGGTGCGCTACGACGGGCAGAAGGTGCCGGAGTGGCAG TGGAGCGTCGGCCTCAACGCCGTCGTCGCGCTGCTCACGCTCGGCATGCGGGCGGCGCTGGCGCTGGTCGCGACC GAGGTCATCAGCCAGGCCAAGTGGATGTGGTTCGCCCGGGGCCCGCAGCGGCTGGCCTACTTCCAGCTCCTCGAC GAGGCCAGCCGCGGCTTCCTGGGCTCCGTCAAGCTCGTCGGCCTGGCGCGCGTCGGCTTCCGCGGCAGCCCGGTC GTCGTCGTCGCCGCCGCCGCCGCCGTCACGTCCGTCCTCAGCCTGGCCATCGGGCCCTTCACCCAGCAGGCGATC CGCACGGTGCCGTGCCTCCGCCCGGCGCCCGAGTACGAGGCTCGGGTGCCGGTGGCCGTGGCCTTGCCCGGCTCC GACGGCTCCTTCACCTTCCCCTACGACATCAGCAAGCGCCCGGTGCTGCCGGGCGTCGGGCCCCGGGCCCAGGGC ACCATCGTCTCGGCCATCGCCAACCCGGGAGGCGGCGGCGGCGGCATCGTCCGGCCGCTATGCCCGACGGGCAAC TGCACCTTTCCCGAGACGCTCGGCGTGCCGCACTCGACCATCGCCTTGTGCGCCCGCTGCCTGGACACGACGCCG CTGCTGCGGCAGGCGCCCAATCGCAGCGTGATCTGGCTCGGCTCCGGTAACGGCAACGACTCCCGCCACGGCCAG GTGGCGCTCTCGGCGGACGGGTGGAAGAAGTTGGTGGCCGGTCCGGGCGGCGGCGGCTTCCCCAACCTGTCGTTC GCGGAGCCGGTCATGACGGCCGAGTTCCGGGCCACCGTCGAGTTGGCGCTCGCCACCTTTTCCGTCCTGACCTGG ACGCGCGCCCGGGACGCGCGCTGCGACAACAACCGCCTCGAGCCGTTCGACAGCCCAAGCTGCTTCGTCGCCGCC ACCTGCTCCTACTACGCCTGCACCAAGGATATCCAGGTCAGGGTGGCGGACGGGCAGCTGCAGGAGACGATGACG AACCCAGTCGCGGCGCAGAGCAACTTCACGCTCGAGGCATTGCGCGAGGGCTACACGAACTTGTTCGTCGTCAAG AGCCCCTGCCTGGTGGACGGGCAGGTCTACGACGCGTCCAACTTCTCGCGGATCCCCGGCGACGGCCGGACAAGG CTGATGGCGGTGTCGACGGCCGACCGGCATGGGATGGTGCGCGCGCCGTCCGAGTGCGTGTACAGTGTGTCGGGC AGCTACGCCGCCGGCCTGGGCCTCCTCCTCTCGCAGGTCTTCTCGGGCCACTGCGACAGCGTGCCGATGGCGTCG GAGAAGCGCGGCTACGTCTTCTGCGACGAGCACTGGTGGCTGCAGCAGCTGTACCACCGCGGCAACGCCTCCTTC CGCTCGCTCGACGGGATGGTGCAGGGCGTCGCCGCGGCCGTGACCGACTTCTTCCGCGTCGACGGTTGGGGCCCC ATCGACGACCGCGGCAACAACCCGGCCGAGGGGGGGCCCGACCGGGAGCACGCGCGCGCCCACCTGCGCGGCGAA GCCCACCGCAGCACCGTCTGCATCCGCCTCGACTGGGCCTGGCTGCTGCCGGCGGGGGCAATCTGCCTGACGACG GCGGCGCTGCTGGTCGCCATGCTCGCCATGAACGCCACGGGCGGCCGAGGCGGAGCGCCGGTCTGGAAGTCGAGT GCGCTACCGCTGCTGTTCTCCGGACTCGCGCTCGGCCGCCGCCCGGATGAGGCCGACGACGAGCTGGACAGCCTG CGCCGGCGGGCCGAGAGCGCCGTGGCAAGCCTGCGCCGGGACGGTGGGTCGGCGAGGAGCGTCCTGGTCGTCGTC GAGGAGCCGGAGGCCGAGCAGACGTCGGCAAGCCCGCGGCACGAGGCGGGCGGCACGCCGCGTCGGTGA |