Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|19
Gene name
LocationContig_10:43823..44966
Strand-
Gene length (bp)1143
Transcript length (bp)1143
Coding sequence length (bp)1143
Protein length (aa) 381

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2056 0.2153 0.8745 0.1577 0.0713 0.0259 0.1253 0.0918 0.209 0.0283

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8932
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|19 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|19
MNQPSPVLPSISIYHATSNSTTGRPRTTYPTQTTTKRRTLPKTTTLPSTTLPSASTNYETSASTSSSLSTIFPNR
TTIERQLFPETSAQPSSALPTTYEKQAASSYTTSLQVTTTLPTQAPTQRQTFLKSSAHPSATFTKPLMGNLTTGN
PLIASTTRTAFRGQTFLKTPDQPSISPSTTSEKYEKSTSISNGIPATSIEHEAFKSRLSSTSTASPTQTTSQHRT
FLTTSASPSTTPLTTSKRYETSSAIFTSSSSQIINSSQSANFSNSVSKSLIIVSKTVTTISSSSTVSNFPEATAA
VTDTFASAFSTLRELSSSSTTVLRGTMTAPLSPVPVNTNFPRPWKGSESGSVTFEETFRDSVLIDNDMNAVDESI
SFCDT*
Coding >Hirsu2|19
ATGAATCAGCCTTCGCCTGTTCTTCCATCCATCTCTATCTACCACGCGACGTCTAATTCCACCACGGGTAGGCCC
CGAACGACGTATCCGACCCAGACGACTACAAAACGTCGAACCTTGCCCAAGACAACAACTCTGCCCTCAACTACT
CTCCCGTCCGCATCCACAAACTACGAAACGTCTGCCTCTACAAGCAGTAGTCTTTCAACCATTTTCCCGAACCGC
ACGACGATCGAACGGCAACTATTCCCCGAGACGTCAGCTCAGCCTTCGTCAGCTCTTCCAACTACGTATGAAAAA
CAGGCTGCATCTAGTTACACAACAAGTCTGCAGGTCACAACCACGTTACCTACCCAGGCGCCTACTCAACGCCAA
ACTTTTCTTAAATCATCGGCTCATCCTTCGGCTACCTTCACAAAGCCCCTGATGGGTAACCTTACAACAGGTAAC
CCCTTGATTGCTTCTACGACCCGCACAGCTTTTCGAGGCCAGACTTTTCTCAAGACGCCAGATCAACCTTCGATT
TCACCTTCAACCACCTCTGAAAAATATGAGAAGTCTACCTCTATTTCCAATGGTATTCCAGCCACTTCTATAGAA
CACGAAGCGTTTAAGTCTCGGCTGAGCAGTACTTCAACCGCATCTCCGACTCAGACGACTTCTCAACACCGAACT
TTCCTTACGACATCAGCTTCGCCTTCAACTACCCCTTTGACCACCTCCAAGAGATACGAGACGTCAAGCGCCATT
TTCACCAGCTCGTCTTCTCAAATAATCAATTCTTCCCAATCTGCCAACTTTTCGAATTCTGTCAGCAAGTCTCTA
ATTATTGTTTCCAAAACCGTTACTACGATATCATCATCCAGCACTGTTAGCAACTTCCCAGAAGCTACAGCCGCT
GTTACGGACACATTTGCTAGTGCTTTCTCTACATTGCGGGAACTATCTTCTTCTTCCACTACGGTACTTCGGGGG
ACTATGACCGCTCCACTTTCACCAGTCCCGGTCAATACGAATTTTCCCCGACCTTGGAAGGGTTCCGAAAGTGGC
AGCGTAACGTTCGAAGAAACGTTTCGAGATTCGGTTCTAATAGATAATGACATGAATGCGGTGGATGAGAGTATA
TCATTTTGCGATACATAG
Transcript >Hirsu2|19
ATGAATCAGCCTTCGCCTGTTCTTCCATCCATCTCTATCTACCACGCGACGTCTAATTCCACCACGGGTAGGCCC
CGAACGACGTATCCGACCCAGACGACTACAAAACGTCGAACCTTGCCCAAGACAACAACTCTGCCCTCAACTACT
CTCCCGTCCGCATCCACAAACTACGAAACGTCTGCCTCTACAAGCAGTAGTCTTTCAACCATTTTCCCGAACCGC
ACGACGATCGAACGGCAACTATTCCCCGAGACGTCAGCTCAGCCTTCGTCAGCTCTTCCAACTACGTATGAAAAA
CAGGCTGCATCTAGTTACACAACAAGTCTGCAGGTCACAACCACGTTACCTACCCAGGCGCCTACTCAACGCCAA
ACTTTTCTTAAATCATCGGCTCATCCTTCGGCTACCTTCACAAAGCCCCTGATGGGTAACCTTACAACAGGTAAC
CCCTTGATTGCTTCTACGACCCGCACAGCTTTTCGAGGCCAGACTTTTCTCAAGACGCCAGATCAACCTTCGATT
TCACCTTCAACCACCTCTGAAAAATATGAGAAGTCTACCTCTATTTCCAATGGTATTCCAGCCACTTCTATAGAA
CACGAAGCGTTTAAGTCTCGGCTGAGCAGTACTTCAACCGCATCTCCGACTCAGACGACTTCTCAACACCGAACT
TTCCTTACGACATCAGCTTCGCCTTCAACTACCCCTTTGACCACCTCCAAGAGATACGAGACGTCAAGCGCCATT
TTCACCAGCTCGTCTTCTCAAATAATCAATTCTTCCCAATCTGCCAACTTTTCGAATTCTGTCAGCAAGTCTCTA
ATTATTGTTTCCAAAACCGTTACTACGATATCATCATCCAGCACTGTTAGCAACTTCCCAGAAGCTACAGCCGCT
GTTACGGACACATTTGCTAGTGCTTTCTCTACATTGCGGGAACTATCTTCTTCTTCCACTACGGTACTTCGGGGG
ACTATGACCGCTCCACTTTCACCAGTCCCGGTCAATACGAATTTTCCCCGACCTTGGAAGGGTTCCGAAAGTGGC
AGCGTAACGTTCGAAGAAACGTTTCGAGATTCGGTTCTAATAGATAATGACATGAATGCGGTGGATGAGAGTATA
TCATTTTGCGATACATAG
Gene >Hirsu2|19
ATGAATCAGCCTTCGCCTGTTCTTCCATCCATCTCTATCTACCACGCGACGTCTAATTCCACCACGGGTAGGCCC
CGAACGACGTATCCGACCCAGACGACTACAAAACGTCGAACCTTGCCCAAGACAACAACTCTGCCCTCAACTACT
CTCCCGTCCGCATCCACAAACTACGAAACGTCTGCCTCTACAAGCAGTAGTCTTTCAACCATTTTCCCGAACCGC
ACGACGATCGAACGGCAACTATTCCCCGAGACGTCAGCTCAGCCTTCGTCAGCTCTTCCAACTACGTATGAAAAA
CAGGCTGCATCTAGTTACACAACAAGTCTGCAGGTCACAACCACGTTACCTACCCAGGCGCCTACTCAACGCCAA
ACTTTTCTTAAATCATCGGCTCATCCTTCGGCTACCTTCACAAAGCCCCTGATGGGTAACCTTACAACAGGTAAC
CCCTTGATTGCTTCTACGACCCGCACAGCTTTTCGAGGCCAGACTTTTCTCAAGACGCCAGATCAACCTTCGATT
TCACCTTCAACCACCTCTGAAAAATATGAGAAGTCTACCTCTATTTCCAATGGTATTCCAGCCACTTCTATAGAA
CACGAAGCGTTTAAGTCTCGGCTGAGCAGTACTTCAACCGCATCTCCGACTCAGACGACTTCTCAACACCGAACT
TTCCTTACGACATCAGCTTCGCCTTCAACTACCCCTTTGACCACCTCCAAGAGATACGAGACGTCAAGCGCCATT
TTCACCAGCTCGTCTTCTCAAATAATCAATTCTTCCCAATCTGCCAACTTTTCGAATTCTGTCAGCAAGTCTCTA
ATTATTGTTTCCAAAACCGTTACTACGATATCATCATCCAGCACTGTTAGCAACTTCCCAGAAGCTACAGCCGCT
GTTACGGACACATTTGCTAGTGCTTTCTCTACATTGCGGGAACTATCTTCTTCTTCCACTACGGTACTTCGGGGG
ACTATGACCGCTCCACTTTCACCAGTCCCGGTCAATACGAATTTTCCCCGACCTTGGAAGGGTTCCGAAAGTGGC
AGCGTAACGTTCGAAGAAACGTTTCGAGATTCGGTTCTAATAGATAATGACATGAATGCGGTGGATGAGAGTATA
TCATTTTGCGATACATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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