© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1890 |
| Gene name | |
| Location | Contig_143:28883..30012 |
| Strand | + |
| Gene length (bp) | 1129 |
| Transcript length (bp) | 876 |
| Coding sequence length (bp) | 876 |
| Protein length (aa) | 292 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13350 | Y_phosphatase3 | Tyrosine phosphatase family | 4.3E-44 | 6 | 290 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q05918|IPHP_NOSCO | Tyrosine-protein phosphatase OS=Nostoc commune GN=iphP PE=1 SV=1 | 164 | 291 | 6.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004721 | phosphoprotein phosphatase activity | Yes |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0003824 | catalytic activity | No |
| GO:0016791 | phosphatase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 121 | 138 | 17 |
| 2 | 145 | 164 | 19 |
| 3 | 198 | 220 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1890 MDRSVQLQQVPNFRDVGQTVNGFLGRKLVREGVLFRSAYPDGASPQDKIILRDELGIRTIIDLRSETEQLRQAGA LQAGTQAPTPWYQWKSERPRPPRIRGIDYREIRITGRSFERHVVRQLAWLDFFKVIFFFVFGYRLRATRIIVREV LVPIGLLGIGTVALDNSSADIYEALKLLTSPRSTPALVHCTLGKDRTGLICALILIILGVPMSAIEYDYFQTDAA LFSSRAKTLAELHDAGFTEEWASTAKNMITGIVDHLSIEYGGVDAYLDQIGFHESDRAKLRDRLLQ* |
| Coding | >Hirsu2|1890 ATGGATCGATCCGTCCAGCTTCAGCAGGTTCCCAACTTCCGAGACGTGGGCCAGACGGTGAACGGGTTTCTCGGT CGCAAATTGGTCCGCGAGGGCGTCCTTTTCCGCTCCGCTTACCCCGATGGCGCCAGTCCGCAGGACAAGATCATT CTCAGAGACGAGCTGGGCATCAGGACCATCATAGACTTGCGGTCAGAGACGGAACAGCTCCGCCAGGCTGGCGCA CTACAAGCAGGCACCCAAGCTCCAACTCCGTGGTATCAGTGGAAGAGTGAGCGGCCACGCCCTCCGCGCATTCGG GGGATAGACTACCGAGAGATACGCATTACCGGCCGCTCGTTTGAGCGCCATGTCGTGAGACAGCTGGCTTGGTTG GACTTCTTCAAGGTCATCTTCTTCTTCGTATTTGGCTACCGCCTGCGGGCCACGCGCATCATCGTCCGCGAAGTC CTTGTCCCCATAGGCTTGCTCGGCATAGGAACTGTTGCCCTCGACAACTCCAGCGCCGACATCTACGAAGCCCTG AAGCTGCTCACAAGCCCGCGCTCGACGCCTGCCTTGGTCCATTGCACGCTCGGAAAAGACAGAACAGGGCTCATC TGCGCTCTGATCCTCATCATTCTTGGCGTGCCAATGTCGGCCATTGAGTACGACTACTTCCAGACAGACGCTGCT CTCTTCTCAAGCCGGGCGAAAACGCTGGCCGAGCTGCACGACGCAGGCTTCACCGAGGAGTGGGCTTCCACAGCC AAGAACATGATCACGGGCATAGTGGATCATCTGTCTATCGAGTACGGCGGCGTGGATGCATACCTCGATCAGATT GGCTTCCACGAATCGGACCGGGCTAAGCTCCGCGACAGGCTTCTGCAATGA |
| Transcript | >Hirsu2|1890 ATGGATCGATCCGTCCAGCTTCAGCAGGTTCCCAACTTCCGAGACGTGGGCCAGACGGTGAACGGGTTTCTCGGT CGCAAATTGGTCCGCGAGGGCGTCCTTTTCCGCTCCGCTTACCCCGATGGCGCCAGTCCGCAGGACAAGATCATT CTCAGAGACGAGCTGGGCATCAGGACCATCATAGACTTGCGGTCAGAGACGGAACAGCTCCGCCAGGCTGGCGCA CTACAAGCAGGCACCCAAGCTCCAACTCCGTGGTATCAGTGGAAGAGTGAGCGGCCACGCCCTCCGCGCATTCGG GGGATAGACTACCGAGAGATACGCATTACCGGCCGCTCGTTTGAGCGCCATGTCGTGAGACAGCTGGCTTGGTTG GACTTCTTCAAGGTCATCTTCTTCTTCGTATTTGGCTACCGCCTGCGGGCCACGCGCATCATCGTCCGCGAAGTC CTTGTCCCCATAGGCTTGCTCGGCATAGGAACTGTTGCCCTCGACAACTCCAGCGCCGACATCTACGAAGCCCTG AAGCTGCTCACAAGCCCGCGCTCGACGCCTGCCTTGGTCCATTGCACGCTCGGAAAAGACAGAACAGGGCTCATC TGCGCTCTGATCCTCATCATTCTTGGCGTGCCAATGTCGGCCATTGAGTACGACTACTTCCAGACAGACGCTGCT CTCTTCTCAAGCCGGGCGAAAACGCTGGCCGAGCTGCACGACGCAGGCTTCACCGAGGAGTGGGCTTCCACAGCC AAGAACATGATCACGGGCATAGTGGATCATCTGTCTATCGAGTACGGCGGCGTGGATGCATACCTCGATCAGATT GGCTTCCACGAATCGGACCGGGCTAAGCTCCGCGACAGGCTTCTGCAATGA |
| Gene | >Hirsu2|1890 ATGGATCGATCCGTCCAGCTTCAGCAGGTTCCCAACTTCCGAGACGTGGGCCAGACGGTGAACGGGTTTCTCGGT CGCAAATTGGTCCGCGAGGGCGTCCTTTTCCGCTCCGCTTACCCCGGTGGGTCGCCTCTCGACGCTGAAGAACAG GCTCTGGATCGGGCATTCGTTCACTGACGCCGACGTGGATAGATGGCGCCAGTCCGCAGGACAAGATCATTCTCA GAGACGAGCTGGGCATCAGGACCATCATAGACTTGCGGTCAGAGTAAGCTCCCTCCCGACGCCGAGCAGGCCGTG AGCTCATGGATGGCATTCAGGACGGAACAGCTCCGCCAGGCTGGCGCACTACAAGCAGGCACCCAAGCTCCAACT CCGTGGTATCAGTGGAAGAGTGAGCGGCCACGCCCTCCGCGCATTCGGGGGATAGACTACCGAGAGATACGCATT ACCGGCCGCTCGTTTGAGCGCCATGTCGTGAGACAGCTGGCTTGGTTGGACTTCTTGTGAGTCTCGCTTCGTGAT CCATGCCCGGCCGGCGCTGATGAAGAATCCGCCCCCCGGCTGAAAGCAAGGTCATCTTCTTCTTCGTATTTGGCT ACCGCCTGCGGGCCACGCGCATCATCGTCCGCGAAGTCCTTGTCCCCATAGGCTTGCTCGGCATAGGAACTGTTG CCCTCGACAACTCCAGCGCCGACATCTACGAAGCCCTGAAGCTGCTCACAAGCCCGCGCTCGACGCCTGCCTTGG TCCATTGCACGCTCGGAAAAGACAGAACAGGTACCCAGCCAAGAGAAAACCCTTGGCGCGATGCCGTCGTCTCAC CGGCTAATGAAACTCGTGAGGGCTCATCTGCGCTCTGATCCTCATCATTCTTGGCGTGCCAATGTCGGCCATTGA GTACGACTACTTCCAGACAGACGCTGCTCTCTTCTCAAGCCGGGCGAAAACGCTGGCCGAGCTGCACGACGCAGG CTTCACCGAGGAGTGGGCTTCCACAGCCAAGAACATGATCACGGGCATAGTGGATCATCTGTCTATCGAGTACGG CGGCGTGGATGCATACCTCGATCAGATTGGCTTCCACGAATCGGACCGGGCTAAGCTCCGCGACAGGCTTCTGCA ATGA |