Protein ID | Hirsu2|1886 |
Gene name | |
Location | Contig_143:21258..22252 |
Strand | + |
Gene length (bp) | 994 |
Transcript length (bp) | 816 |
Coding sequence length (bp) | 816 |
Protein length (aa) | 272 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 1.3E-42 | 9 | 224 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7U1|SFK1_SCHPO | Protein sfk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sfk1 PE=3 SV=1 | 3 | 245 | 6.0E-14 |
sp|P35735|SFK1_YEAST | Protein SFK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFK1 PE=1 SV=1 | 11 | 230 | 4.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 62 | 81 | 19 |
3 | 101 | 123 | 22 |
4 | 133 | 150 | 17 |
5 | 171 | 190 | 19 |
6 | 205 | 227 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1886 MALWSFFSYWMLPVFSSLVWFGMLLGMLLHWVIDTNTRHYPEMSEHAHIAYISNVGAHELKPLFIAGSTVTAVFL DLSFVAERWLRHNGRLVPNTSIGEKILASLTILCALIGTLGLILLTILDTWRHHHLHGGFLVVFIVGYLLSAVFI CWEYQRLGIKNRQHRVLRASFWVKLTFVIVEVALVIVFIANSARHEPNVAAVFEWIVAFIFTFYILSFVIDLYPA IRTKEYSSRFEKPGDVEEAATPAPAGSGPTLHQGEYPVVDRNAANF* |
Coding | >Hirsu2|1886 ATGGCGCTTTGGAGCTTCTTTTCCTACTGGATGTTGCCCGTCTTCTCCAGCCTCGTCTGGTTCGGCATGCTGCTC GGCATGCTGCTCCACTGGGTCATCGACACCAACACCCGCCATTACCCGGAAATGTCGGAACACGCCCACATCGCC TACATCAGCAACGTCGGCGCCCACGAGCTCAAGCCACTCTTCATCGCCGGCTCCACCGTCACCGCCGTCTTCCTC GACCTGTCCTTCGTCGCCGAGCGCTGGCTCCGCCACAACGGCCGCCTCGTCCCCAACACCTCCATCGGCGAGAAG ATCCTCGCCAGCCTGACCATCTTGTGCGCCCTCATCGGCACCCTGGGGCTCATTCTCCTCACCATCCTCGACACC TGGCGCCACCATCACCTGCACGGCGGCTTCCTCGTCGTCTTCATTGTCGGCTACCTGCTCTCCGCCGTCTTCATC TGCTGGGAGTACCAACGTCTCGGCATCAAAAACCGCCAACACCGTGTCCTCCGCGCTTCATTCTGGGTCAAGCTC ACCTTCGTCATCGTCGAGGTGGCTCTTGTCATCGTCTTCATCGCCAACTCGGCGCGTCACGAGCCCAACGTCGCC GCCGTCTTCGAGTGGATCGTCGCCTTCATCTTCACCTTCTACATCCTCTCCTTCGTCATCGATCTCTACCCGGCC ATCCGCACCAAGGAGTACAGCTCCCGCTTCGAGAAGCCCGGTGACGTTGAAGAGGCCGCCACACCCGCTCCCGCC GGCAGCGGCCCCACTCTCCACCAAGGCGAATATCCCGTTGTGGACAGGAATGCCGCCAACTTCTGA |
Transcript | >Hirsu2|1886 ATGGCGCTTTGGAGCTTCTTTTCCTACTGGATGTTGCCCGTCTTCTCCAGCCTCGTCTGGTTCGGCATGCTGCTC GGCATGCTGCTCCACTGGGTCATCGACACCAACACCCGCCATTACCCGGAAATGTCGGAACACGCCCACATCGCC TACATCAGCAACGTCGGCGCCCACGAGCTCAAGCCACTCTTCATCGCCGGCTCCACCGTCACCGCCGTCTTCCTC GACCTGTCCTTCGTCGCCGAGCGCTGGCTCCGCCACAACGGCCGCCTCGTCCCCAACACCTCCATCGGCGAGAAG ATCCTCGCCAGCCTGACCATCTTGTGCGCCCTCATCGGCACCCTGGGGCTCATTCTCCTCACCATCCTCGACACC TGGCGCCACCATCACCTGCACGGCGGCTTCCTCGTCGTCTTCATTGTCGGCTACCTGCTCTCCGCCGTCTTCATC TGCTGGGAGTACCAACGTCTCGGCATCAAAAACCGCCAACACCGTGTCCTCCGCGCTTCATTCTGGGTCAAGCTC ACCTTCGTCATCGTCGAGGTGGCTCTTGTCATCGTCTTCATCGCCAACTCGGCGCGTCACGAGCCCAACGTCGCC GCCGTCTTCGAGTGGATCGTCGCCTTCATCTTCACCTTCTACATCCTCTCCTTCGTCATCGATCTCTACCCGGCC ATCCGCACCAAGGAGTACAGCTCCCGCTTCGAGAAGCCCGGTGACGTTGAAGAGGCCGCCACACCCGCTCCCGCC GGCAGCGGCCCCACTCTCCACCAAGGCGAATATCCCGTTGTGGACAGGAATGCCGCCAACTTCTGA |
Gene | >Hirsu2|1886 ATGGCGCTTTGGAGCTTCTTTTCCTACTGGGTACGCTGCTCCCCCCTTCCCTCCCCCCCTGCCTCGGGGGTGCCG CCGGCCCGGTGCTCTCTTGACTGACACCTGACGTGGCGCCGCAGATGTTGCCCGTCTTCTCCAGCCTCGTCTGGT TCGGCATGCTGCTCGGCATGCTGCTCCACTGGGTCATCGACACCAACACCCGCCATTACCCGGAAATGTCGGAAC ACGCCCACATCGCCTACATCAGCAACGTCGGCGCCCACGAGCTCAAGCCACTCTTCATCGCCGGCTCCACCGTCA CCGCCGTCTTCCTCGACCTGTCCTTCGTCGCCGAGCGCTGGCTCCGCCACAACGGCCGCCTCGTCCCCAACACCT CCATCGGCGAGAAGATCCTCGCCAGCCTGACCATCTTGTGCGCCCTCATCGGCACCCTGGGGCTCATTCTCCTCA CCATCCTCGACACCTGGCGCCACCATCACCTGCACGGCGGCTTCCTCGTCGTCTTCATTGTCGGCTACCTGCTCT CCGCCGTCTTCATCTGCTGGGAGTACCAACGTCTCGGCATCAGTATGTGCTTGGGGATACAACCTCCTGTCTTGC TTGGACTCTGTATCCGTATCACGAGCCCGGTCTGCTAACATTGAGCCCCTGCCCAGAAAACCGCCAACACCGTGT CCTCCGCGCTTCATTCTGGGTCAAGCTCACCTTCGTCATCGTCGAGGTGGCTCTTGTCATCGTCTTCATCGCCAA CTCGGCGCGTCACGAGCCCAACGTCGCCGCCGTCTTCGAGTGGATCGTCGCCTTCATCTTCACCTTCTACATCCT CTCCTTCGTCATCGATCTCTACCCGGCCATCCGCACCAAGGAGTACAGCTCCCGCTTCGAGAAGCCCGGTGACGT TGAAGAGGCCGCCACACCCGCTCCCGCCGGCAGCGGCCCCACTCTCCACCAAGGCGAATATCCCGTTGTGGACAG GAATGCCGCCAACTTCTGA |