Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1880
Gene name
LocationContig_143:5318..6316
Strand+
Gene length (bp)998
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20520 Ac45-VOA1_TM V0 complex accessory subunit Ac45/VOA1 transmembrane domain 3.3E-19 222 261

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7R6|BIG1_SCHPO Protein big1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=big1 PE=3 SV=1 217 260 2.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.0738 0.0965 0.1002 0.1095 0.1596 0.0112 0.8479 0.572 0.3958 0.0182

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.781501

Transmembrane Domains

Domain # Start End Length
1 224 246 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1856
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6497
Ophiocordyceps australis map64 (Brazil) OphauB2|3758
Ophiocordyceps camponoti-floridani Ophcf2|04759
Ophiocordyceps camponoti-rufipedis Ophun1|20
Ophiocordyceps kimflemingae Ophio5|5752
Ophiocordyceps subramaniannii Hirsu2|1880 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1880
MRPHSILGTLTLSSVGFALSDSSAWLVASTSRFQDAGSHNQIQTSSEALKHTNEILSACPTDKYLIITQPGIRAK
DLRRADGCSMPHLCRATDEVRMKGRFSVAEVVGSVDHAMLSEYIRSGCDKKGKPVVIDEIHLATLSSDDRARTLF
ENDATLSGKLQAVAKHKSYTILLLSAPSEPAYQADFDDSVHMVVKRDMNAVPLLRRDNNTQWENLPLFQKYQFFT
PGIFMGIFVALVLLSILSVGLRALSSLEVSYGAFEKEMGPAAQKKQQ*
Coding >Hirsu2|1880
ATGCGTCCTCACTCGATACTCGGTACGCTGACGCTTTCGAGCGTTGGGTTCGCCTTGTCGGACTCGTCCGCCTGG
CTCGTAGCATCTACGTCAAGGTTCCAAGATGCCGGCAGCCACAACCAAATTCAGACGAGCTCTGAAGCCCTGAAA
CATACCAATGAGATACTTTCAGCGTGTCCGACGGACAAATACCTCATCATCACGCAGCCTGGCATTCGCGCCAAA
GATCTCCGCAGAGCCGACGGCTGCTCCATGCCACACCTCTGCCGAGCCACTGATGAGGTTCGCATGAAGGGCCGC
TTCAGCGTTGCCGAAGTCGTTGGCAGCGTGGACCACGCCATGCTCTCGGAATATATCAGGTCGGGGTGCGATAAG
AAGGGCAAGCCAGTCGTCATCGACGAGATTCACCTGGCAACCTTGTCTTCTGATGACAGGGCTCGTACTCTGTTT
GAGAATGATGCAACTCTCTCCGGCAAACTGCAGGCCGTTGCGAAGCACAAAAGCTACACAATCCTGCTCTTGTCG
GCTCCGAGCGAGCCAGCCTATCAAGCCGACTTCGACGATTCCGTCCATATGGTGGTGAAGCGTGACATGAACGCT
GTGCCTCTACTCCGCAGGGATAATAATACGCAGTGGGAAAACCTCCCGCTTTTCCAGAAGTACCAGTTTTTCACC
CCAGGCATCTTTATGGGTATCTTCGTGGCGCTCGTCCTCCTATCAATTCTCAGCGTCGGTTTGAGGGCCCTTTCC
AGTCTGGAGGTCTCGTATGGCGCATTCGAGAAGGAAATGGGTCCGGCTGCGCAGAAGAAGCAGCAGTGA
Transcript >Hirsu2|1880
ATGCGTCCTCACTCGATACTCGGTACGCTGACGCTTTCGAGCGTTGGGTTCGCCTTGTCGGACTCGTCCGCCTGG
CTCGTAGCATCTACGTCAAGGTTCCAAGATGCCGGCAGCCACAACCAAATTCAGACGAGCTCTGAAGCCCTGAAA
CATACCAATGAGATACTTTCAGCGTGTCCGACGGACAAATACCTCATCATCACGCAGCCTGGCATTCGCGCCAAA
GATCTCCGCAGAGCCGACGGCTGCTCCATGCCACACCTCTGCCGAGCCACTGATGAGGTTCGCATGAAGGGCCGC
TTCAGCGTTGCCGAAGTCGTTGGCAGCGTGGACCACGCCATGCTCTCGGAATATATCAGGTCGGGGTGCGATAAG
AAGGGCAAGCCAGTCGTCATCGACGAGATTCACCTGGCAACCTTGTCTTCTGATGACAGGGCTCGTACTCTGTTT
GAGAATGATGCAACTCTCTCCGGCAAACTGCAGGCCGTTGCGAAGCACAAAAGCTACACAATCCTGCTCTTGTCG
GCTCCGAGCGAGCCAGCCTATCAAGCCGACTTCGACGATTCCGTCCATATGGTGGTGAAGCGTGACATGAACGCT
GTGCCTCTACTCCGCAGGGATAATAATACGCAGTGGGAAAACCTCCCGCTTTTCCAGAAGTACCAGTTTTTCACC
CCAGGCATCTTTATGGGTATCTTCGTGGCGCTCGTCCTCCTATCAATTCTCAGCGTCGGTTTGAGGGCCCTTTCC
AGTCTGGAGGTCTCGTATGGCGCATTCGAGAAGGAAATGGGTCCGGCTGCGCAGAAGAAGCAGCAGTGA
Gene >Hirsu2|1880
ATGCGTCCTCACTCGATACTCGGTACGCTGACGCTTTCGAGCGTTGGGTTCGCCTTGTCGGACTCGTCCGCCTGG
CTCGTAGCATCTACGTCAAGGTGCGCACCGCTCTCCAAGGCAGCTCGTCACTCCTTCACAAGCTAATCCCGTCAC
CTCCCCAGGTTCCAAGATGCCGGCAGCCACAACCAAATTCAGACGAGCTCTGAAGCCCTGAAACATACCAATGAG
ATACTTTCAGCGTGTCCGACGGACAAATACCTCATCATCACGCAGCCTGGCATTCGCGCCAAAGATCTCCGCAGA
GCCGACGGCTGCTCCATGCCACACCTCTGCCGAGCCACTGATGAGGTTCGCATGAAGGGCCGCTTCAGCGTTGCC
GAAGTCGTTGGCAGCGTGGACCACGCCATGCTCTCGGAATATATCAGGTCGGGGTGCGATAAGAAGGGCAAGCCA
GTCGTCATCGACGAGATTCACCTGGCAACCTTGTCTTCTGATGACAGGGCTCGTACTCTGTTTGAGAATGGTGCG
ATTTTACCTCCAACACTTGTAAAGCCAGTTTCTTGACTTACAGAGGACCAGATGCAACTCTCTCCGGCAAACTGC
AGGCCGTTGCGAAGCACAAAAGCTACACAATCCTGCTCTTGTCGGCTCCGAGCGAGCCAGCCTATCAAGCCGACT
TCGACGATTCCGTCCATATGGTGGTGAAGCGTGACATGAACGCTGTGCCTCTACTCCGCAGGGATAATAATACGC
AGTGGGAAAACCTCCCGCTTTTCCAGAAGTACCAGTTTTTCACCCCAGGTATACCCTCTTTTTTTTCCTCGCTCA
GCACGACACCACGCAATTGACACGGCGTCACAGGCATCTTTATGGGTATCTTCGTGGCGCTCGTCCTCCTATCAA
TTCTCAGCGTCGGTTTGAGGGCCCTTTCCAGTCTGGAGGTCTCGTATGGCGCATTCGAGAAGGAAATGGGTCCGG
CTGCGCAGAAGAAGCAGCAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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