Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1868
Gene name
LocationContig_1425:4161..5251
Strand-
Gene length (bp)1090
Transcript length (bp)981
Coding sequence length (bp)981
Protein length (aa) 327

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00651 BTB BTB/POZ domain 7.1E-15 9 85

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1868
MATNRGVFLEEMLKSEEYSDLRFTCNEHIFRVHKAVVCAQSPVVRAALSGHFKESEANAINMDSFHPMSVRNFVR
FLYTGDYDATATLENPDGESSRSRKQEADTISKQLIDLSIVEGGADSSSCKLAAAPPVPPPTTSVTELICEHIRV
NSIGHYYGVEALVSLANGKISALVHKDGKDQSWIADLPKLTAEALESTGDSAMLEILASATARNMSALTKPDWLR
DLGAAWACDVAILQACAQHMDAQRAKITRRSRTISELESRISQLEGKIEALSSKNDRFAAVLRQMNDTAECRNLS
CQAPDFSTHIDPDELILRCRHCKCKH*
Coding >Hirsu2|1868
ATGGCCACAAACCGCGGTGTCTTCCTCGAGGAGATGTTGAAGTCCGAGGAGTACAGTGACCTCAGATTTACATGC
AACGAGCATATCTTCCGGGTTCACAAGGCCGTCGTTTGCGCCCAGTCTCCCGTCGTCAGAGCGGCTCTGTCGGGC
CATTTCAAGGAATCCGAAGCCAATGCCATCAATATGGACAGCTTTCATCCCATGTCCGTCAGGAACTTCGTTCGG
TTCCTGTATACTGGCGATTACGACGCCACGGCCACGCTGGAAAATCCCGACGGCGAGAGTTCACGCAGCCGCAAA
CAAGAAGCTGATACCATATCCAAACAACTAATCGACCTGAGTATCGTCGAAGGCGGCGCGGACTCTTCGTCTTGC
AAGCTGGCGGCAGCACCGCCGGTGCCGCCACCGACCACCAGCGTGACCGAACTTATCTGTGAACACATCCGCGTC
AATTCCATCGGGCACTACTACGGCGTTGAGGCTCTCGTGTCGCTTGCCAACGGCAAGATTTCCGCTCTTGTTCAC
AAAGATGGCAAGGACCAGAGCTGGATTGCGGACCTCCCCAAGTTGACCGCAGAAGCACTGGAGTCGACGGGGGAC
TCGGCCATGCTTGAGATCCTGGCATCAGCAACAGCGAGAAATATGTCGGCCCTGACAAAGCCGGATTGGCTCCGC
GATCTGGGTGCTGCCTGGGCTTGCGATGTCGCCATCCTCCAGGCCTGTGCTCAGCATATGGACGCACAGCGGGCG
AAAATCACAAGGCGCTCTCGGACCATTTCCGAGCTGGAGTCGAGAATTTCGCAGCTAGAGGGGAAAATCGAGGCA
CTGTCGTCCAAGAATGATCGCTTCGCTGCTGTTCTTCGTCAAATGAACGATACCGCTGAATGCAGGAACCTATCC
TGCCAGGCCCCAGATTTTTCGACACACATAGACCCGGACGAGCTCATTTTGCGCTGCCGACACTGCAAGTGCAAG
CATTGA
Transcript >Hirsu2|1868
ATGGCCACAAACCGCGGTGTCTTCCTCGAGGAGATGTTGAAGTCCGAGGAGTACAGTGACCTCAGATTTACATGC
AACGAGCATATCTTCCGGGTTCACAAGGCCGTCGTTTGCGCCCAGTCTCCCGTCGTCAGAGCGGCTCTGTCGGGC
CATTTCAAGGAATCCGAAGCCAATGCCATCAATATGGACAGCTTTCATCCCATGTCCGTCAGGAACTTCGTTCGG
TTCCTGTATACTGGCGATTACGACGCCACGGCCACGCTGGAAAATCCCGACGGCGAGAGTTCACGCAGCCGCAAA
CAAGAAGCTGATACCATATCCAAACAACTAATCGACCTGAGTATCGTCGAAGGCGGCGCGGACTCTTCGTCTTGC
AAGCTGGCGGCAGCACCGCCGGTGCCGCCACCGACCACCAGCGTGACCGAACTTATCTGTGAACACATCCGCGTC
AATTCCATCGGGCACTACTACGGCGTTGAGGCTCTCGTGTCGCTTGCCAACGGCAAGATTTCCGCTCTTGTTCAC
AAAGATGGCAAGGACCAGAGCTGGATTGCGGACCTCCCCAAGTTGACCGCAGAAGCACTGGAGTCGACGGGGGAC
TCGGCCATGCTTGAGATCCTGGCATCAGCAACAGCGAGAAATATGTCGGCCCTGACAAAGCCGGATTGGCTCCGC
GATCTGGGTGCTGCCTGGGCTTGCGATGTCGCCATCCTCCAGGCCTGTGCTCAGCATATGGACGCACAGCGGGCG
AAAATCACAAGGCGCTCTCGGACCATTTCCGAGCTGGAGTCGAGAATTTCGCAGCTAGAGGGGAAAATCGAGGCA
CTGTCGTCCAAGAATGATCGCTTCGCTGCTGTTCTTCGTCAAATGAACGATACCGCTGAATGCAGGAACCTATCC
TGCCAGGCCCCAGATTTTTCGACACACATAGACCCGGACGAGCTCATTTTGCGCTGCCGACACTGCAAGTGCAAG
CATTGA
Gene >Hirsu2|1868
ATGGCCACAAACCGCGGTGTCTTCCTCGAGGAGATGTTGAAGTCCGAGGAGTACAGTGACCTCAGATTTACATGC
AACGAGCATATCTTCCGGGTTCACAAGGCCGTCGTTTGCGCCCAGTCTCCCGTCGTCAGAGCGGCTCTGTCGGGC
CATTTCAAGGTTCGTTGTCGAACCCCTTGGCTCGTCGGGACGTACGCTCATGCCGCTGCTACAGGAATCCGAAGC
CAATGCCATCAATATGGACAGCTTTCATCCCATGTCCGTCAGGAACTTCGTTCGGTTCCTGTATACTGGCGATTA
CGACGCCACGGCCACGCTGGAAAATCCCGACGGCGAGAGTTCACGCAGCCGCAAACAAGGTGAGGCGTCAGGCCG
AGCATAGCTGAGAAGCCCCAGGACTAACAGCACGGCAGAAGCTGATACCATATCCAAACAACTAATCGACCTGAG
TATCGTCGAAGGCGGCGCGGACTCTTCGTCTTGCAAGCTGGCGGCAGCACCGCCGGTGCCGCCACCGACCACCAG
CGTGACCGAACTTATCTGTGAACACATCCGCGTCAATTCCATCGGGCACTACTACGGCGTTGAGGCTCTCGTGTC
GCTTGCCAACGGCAAGATTTCCGCTCTTGTTCACAAAGATGGCAAGGACCAGAGCTGGATTGCGGACCTCCCCAA
GTTGACCGCAGAAGCACTGGAGTCGACGGGGGACTCGGCCATGCTTGAGATCCTGGCATCAGCAACAGCGAGAAA
TATGTCGGCCCTGACAAAGCCGGATTGGCTCCGCGATCTGGGTGCTGCCTGGGCTTGCGATGTCGCCATCCTCCA
GGCCTGTGCTCAGCATATGGACGCACAGCGGGCGAAAATCACAAGGCGCTCTCGGACCATTTCCGAGCTGGAGTC
GAGAATTTCGCAGCTAGAGGGGAAAATCGAGGCACTGTCGTCCAAGAATGATCGCTTCGCTGCTGTTCTTCGTCA
AATGAACGATACCGCTGAATGCAGGAACCTATCCTGCCAGGCCCCAGATTTTTCGACACACATAGACCCGGACGA
GCTCATTTTGCGCTGCCGACACTGCAAGTGCAAGCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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