Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|186
Gene name
LocationContig_103:31541..31904
Strand-
Gene length (bp)363
Transcript length (bp)363
Coding sequence length (bp)363
Protein length (aa) 121

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1607 0.0858 0.955 0.0752 0.1293 0.1288 0.1438 0.2426 0.1949 0.017

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999761

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup171
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2453
Ophiocordyceps australis 1348a (Ghana) OphauG2|5209
Ophiocordyceps australis 1348a (Ghana) OphauG2|6873
Ophiocordyceps australis map64 (Brazil) OphauB2|6831
Ophiocordyceps australis map64 (Brazil) OphauB2|7159
Ophiocordyceps kimflemingae Ophio5|5336
Ophiocordyceps kimflemingae Ophio5|7312
Ophiocordyceps subramaniannii Hirsu2|186 (this protein)
Ophiocordyceps subramaniannii Hirsu2|260
Ophiocordyceps subramaniannii Hirsu2|2751
Ophiocordyceps subramaniannii Hirsu2|9178

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|186
MFPLAVVTIAAVFVPAVSASCPADGRVCEWYGSSTACGTSAFSAGDLDAGMYRLVASTRYAFLNVLCSSSESPGE
ECCNDYGLRCVGGYKRLWCSKRPVRLKSRRQTLNLSNVTLIVTRK*
Coding >Hirsu2|186
ATGTTTCCGCTTGCTGTTGTCACCATAGCTGCCGTCTTTGTTCCCGCCGTCTCTGCTTCGTGTCCTGCCGATGGC
AGGGTGTGCGAATGGTACGGCTCATCGACCGCATGCGGGACAAGCGCGTTCAGTGCCGGGGACCTGGATGCCGGG
ATGTACCGACTCGTCGCCTCTACCCGCTACGCCTTTCTGAACGTCCTCTGCTCGAGCTCAGAAAGCCCCGGAGAG
GAATGCTGCAACGACTACGGGCTCCGCTGCGTCGGTGGCTATAAGCGGCTATGGTGCTCCAAAAGACCTGTTCGT
CTAAAATCCCGACGTCAAACGCTGAACCTATCTAACGTCACCCTTATCGTCACCAGGAAGTAA
Transcript >Hirsu2|186
ATGTTTCCGCTTGCTGTTGTCACCATAGCTGCCGTCTTTGTTCCCGCCGTCTCTGCTTCGTGTCCTGCCGATGGC
AGGGTGTGCGAATGGTACGGCTCATCGACCGCATGCGGGACAAGCGCGTTCAGTGCCGGGGACCTGGATGCCGGG
ATGTACCGACTCGTCGCCTCTACCCGCTACGCCTTTCTGAACGTCCTCTGCTCGAGCTCAGAAAGCCCCGGAGAG
GAATGCTGCAACGACTACGGGCTCCGCTGCGTCGGTGGCTATAAGCGGCTATGGTGCTCCAAAAGACCTGTTCGT
CTAAAATCCCGACGTCAAACGCTGAACCTATCTAACGTCACCCTTATCGTCACCAGGAAGTAA
Gene >Hirsu2|186
ATGTTTCCGCTTGCTGTTGTCACCATAGCTGCCGTCTTTGTTCCCGCCGTCTCTGCTTCGTGTCCTGCCGATGGC
AGGGTGTGCGAATGGTACGGCTCATCGACCGCATGCGGGACAAGCGCGTTCAGTGCCGGGGACCTGGATGCCGGG
ATGTACCGACTCGTCGCCTCTACCCGCTACGCCTTTCTGAACGTCCTCTGCTCGAGCTCAGAAAGCCCCGGAGAG
GAATGCTGCAACGACTACGGGCTCCGCTGCGTCGGTGGCTATAAGCGGCTATGGTGCTCCAAAAGACCTGTTCGT
CTAAAATCCCGACGTCAAACGCTGAACCTATCTAACGTCACCCTTATCGTCACCAGGAAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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