Protein ID | Hirsu2|185 |
Gene name | |
Location | Contig_103:27712..28049 |
Strand | + |
Gene length (bp) | 337 |
Transcript length (bp) | 285 |
Coding sequence length (bp) | 285 |
Protein length (aa) | 95 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0558 | 0.0458 | 0.9334 | 0.0569 | 0.0544 | 0.0031 | 0.0292 | 0.1597 | 0.0298 | 0.0031 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999809 |
Orthofinder run ID | 4 |
Orthogroup | 507 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|185 MKLSITLVAMSLLAGALGRNCKNGVRYCGRTLLSIGDYEDQIRHKCDGGGSHCFNEGAEDTLFYCNDIFGNVEYT QYCSNGCTDGGAGNNDYCA* |
Coding | >Hirsu2|185 ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT CGATACTGCGGACGAACACTCTTGTCAATCGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGC TCTCATTGCTTCAACGAGGGTGCAGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACT CAGTACTGCTCCAACGGCTGCACAGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA |
Transcript | >Hirsu2|185 ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT CGATACTGCGGACGAACACTCTTGTCAATCGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGC TCTCATTGCTTCAACGAGGGTGCAGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACT CAGTACTGCTCCAACGGCTGCACAGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA |
Gene | >Hirsu2|185 ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT CGATACTGCGGACGAACACTCTTGTCAATCGGTTAGCATGCCCGCGGCACTGTTTCGGTGCGCATCACTGATTGT AATTCTAGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGCTCTCATTGCTTCAACGAGGGTGC AGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACTCAGTACTGCTCCAACGGCTGCAC AGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA |