Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|185
Gene name
LocationContig_103:27712..28049
Strand+
Gene length (bp)337
Transcript length (bp)285
Coding sequence length (bp)285
Protein length (aa) 95

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0558 0.0458 0.9334 0.0569 0.0544 0.0031 0.0292 0.1597 0.0298 0.0031

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999809

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup507
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7417
Ophiocordyceps australis map64 (Brazil) OphauB2|7158
Ophiocordyceps camponoti-floridani Ophcf2|01050
Ophiocordyceps camponoti-floridani Ophcf2|02384
Ophiocordyceps kimflemingae Ophio5|6908
Ophiocordyceps subramaniannii Hirsu2|185 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5775
Ophiocordyceps subramaniannii Hirsu2|6831

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|185
MKLSITLVAMSLLAGALGRNCKNGVRYCGRTLLSIGDYEDQIRHKCDGGGSHCFNEGAEDTLFYCNDIFGNVEYT
QYCSNGCTDGGAGNNDYCA*
Coding >Hirsu2|185
ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT
CGATACTGCGGACGAACACTCTTGTCAATCGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGC
TCTCATTGCTTCAACGAGGGTGCAGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACT
CAGTACTGCTCCAACGGCTGCACAGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA
Transcript >Hirsu2|185
ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT
CGATACTGCGGACGAACACTCTTGTCAATCGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGC
TCTCATTGCTTCAACGAGGGTGCAGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACT
CAGTACTGCTCCAACGGCTGCACAGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA
Gene >Hirsu2|185
ATGAAGCTCTCCATCACCCTCGTCGCCATGTCTCTTCTTGCTGGCGCCCTTGGTAGGAACTGCAAGAATGGCGTT
CGATACTGCGGACGAACACTCTTGTCAATCGGTTAGCATGCCCGCGGCACTGTTTCGGTGCGCATCACTGATTGT
AATTCTAGGAGACTATGAGGATCAAATCAGGCACAAATGTGATGGAGGTGGCTCTCATTGCTTCAACGAGGGTGC
AGAAGATACTCTTTTCTACTGCAACGACATTTTCGGCAACGTCGAGTATACTCAGTACTGCTCCAACGGCTGCAC
AGATGGCGGTGCGGGCAACAACGATTACTGCGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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