Protein ID | Hirsu2|1843 |
Gene name | |
Location | Contig_1419:3626..4994 |
Strand | + |
Gene length (bp) | 1368 |
Transcript length (bp) | 1368 |
Coding sequence length (bp) | 1368 |
Protein length (aa) | 456 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16483 | Glyco_hydro_64 | Beta-1,3-glucanase | 1.8E-119 | 76 | 450 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P22222|E13B_CELCE | Glucan endo-1,3-beta-glucosidase OS=Cellulosimicrobium cellulans PE=1 SV=1 | 78 | 450 | 2.0E-16 |
sp|Q59146|E13B_ARTSW | Glucan endo-1,3-beta-glucosidase OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1 | 78 | 450 | 1.0E-15 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1197 | 0.1018 | 0.8919 | 0.0666 | 0.0572 | 0.0504 | 0.1074 | 0.2119 | 0.1178 | 0.0136 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999754 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH64 | 3.6E-86 | 78 | 451 |
Orthofinder run ID | 4 |
Orthogroup | 6544 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1843 MRHLSTVAAFLGAASAVSPLVHRASDVFSVAVPGGVEDVVITKENTINGTYHDSKTTVVHQNKLRDAGTGATSRP LLLELVNNHGGGQAYVYITGLDWANRVVFVKADGTLVYPSSGGSRVPVPVGESVAVPLPPGRGRSLRMALPIAIS SGRVWIAEGQLHFYMVRTASGDGLVQPSPTNLRDPSSGINWGFAELTCTRERKIYANISYVDFVGLILSISLRGG NGRGSQMTRGLGANSVSKICQGMATQSSRDGFPWRGMCVISKAGNPIRVLSPNNYAIINPAGFQHYWGPYVDRVW GEYGRTPLFINTQSPAGTVACKVSGGLLRCGGGDNRGYAKPTANDIWGCNSGPFEKHAGDNAVHVAVIPRLCAAF VRSTLLLGGGNVQPRVASSLYYKTTPTSHYSRLVHELEVDGKGYAFPYDDVNPDGDGNASGVVASDDPEALTIYV GAPPP* |
Coding | >Hirsu2|1843 ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC GGCGCGCCTCCGCCCTGA |
Transcript | >Hirsu2|1843 ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC GGCGCGCCTCCGCCCTGA |
Gene | >Hirsu2|1843 ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC GGCGCGCCTCCGCCCTGA |