Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1843
Gene name
LocationContig_1419:3626..4994
Strand+
Gene length (bp)1368
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16483 Glyco_hydro_64 Beta-1,3-glucanase 1.8E-119 76 450

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P22222|E13B_CELCE Glucan endo-1,3-beta-glucosidase OS=Cellulosimicrobium cellulans PE=1 SV=1 78 450 2.0E-16
sp|Q59146|E13B_ARTSW Glucan endo-1,3-beta-glucosidase OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1 78 450 1.0E-15

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1197 0.1018 0.8919 0.0666 0.0572 0.0504 0.1074 0.2119 0.1178 0.0136

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.999754

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH64 3.6E-86 78 451

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6544
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|00530
Ophiocordyceps camponoti-rufipedis Ophun1|3394
Ophiocordyceps kimflemingae Ophio5|6987
Ophiocordyceps subramaniannii Hirsu2|1843 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1843
MRHLSTVAAFLGAASAVSPLVHRASDVFSVAVPGGVEDVVITKENTINGTYHDSKTTVVHQNKLRDAGTGATSRP
LLLELVNNHGGGQAYVYITGLDWANRVVFVKADGTLVYPSSGGSRVPVPVGESVAVPLPPGRGRSLRMALPIAIS
SGRVWIAEGQLHFYMVRTASGDGLVQPSPTNLRDPSSGINWGFAELTCTRERKIYANISYVDFVGLILSISLRGG
NGRGSQMTRGLGANSVSKICQGMATQSSRDGFPWRGMCVISKAGNPIRVLSPNNYAIINPAGFQHYWGPYVDRVW
GEYGRTPLFINTQSPAGTVACKVSGGLLRCGGGDNRGYAKPTANDIWGCNSGPFEKHAGDNAVHVAVIPRLCAAF
VRSTLLLGGGNVQPRVASSLYYKTTPTSHYSRLVHELEVDGKGYAFPYDDVNPDGDGNASGVVASDDPEALTIYV
GAPPP*
Coding >Hirsu2|1843
ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG
GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC
TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG
CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC
CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG
GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG
TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG
CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG
GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC
AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG
CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC
TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG
GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG
GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC
AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC
GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG
CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC
GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC
GGCGCGCCTCCGCCCTGA
Transcript >Hirsu2|1843
ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG
GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC
TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG
CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC
CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG
GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG
TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG
CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG
GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC
AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG
CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC
TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG
GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG
GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC
AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC
GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG
CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC
GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC
GGCGCGCCTCCGCCCTGA
Gene >Hirsu2|1843
ATGCGACATCTCAGCACGGTCGCTGCCTTTCTGGGAGCCGCGTCGGCAGTCTCGCCCTTGGTCCATCGAGCGTCG
GACGTCTTCAGCGTCGCCGTCCCGGGCGGAGTCGAAGACGTCGTCATCACCAAGGAAAACACCATCAACGGCACC
TACCACGACTCGAAAACGACCGTCGTTCACCAGAACAAGCTGCGCGACGCCGGGACAGGCGCCACCTCGCGGCCG
CTGTTGCTGGAGCTCGTCAACAACCATGGCGGCGGCCAGGCGTACGTCTACATCACCGGGCTGGACTGGGCCAAC
CGAGTCGTCTTCGTCAAAGCGGACGGCACCTTGGTCTACCCGAGCTCCGGCGGCTCCCGGGTGCCCGTGCCGGTG
GGCGAGAGCGTGGCCGTGCCGCTGCCGCCCGGGCGAGGCCGGAGCCTGAGGATGGCGCTGCCCATCGCCATCTCG
TCGGGGCGCGTCTGGATCGCCGAAGGGCAGCTTCACTTCTACATGGTCAGGACGGCGAGCGGCGACGGCCTGGTG
CAGCCGTCGCCGACCAACCTCCGGGACCCCAGCTCCGGCATCAACTGGGGGTTCGCCGAGTTGACGTGCACGAGG
GAGCGCAAGATCTACGCCAACATCAGCTACGTCGACTTCGTCGGGCTGATCCTCAGCATCAGCCTGAGGGGGGGC
AACGGCAGGGGCTCGCAGATGACGCGCGGACTCGGGGCCAACTCGGTGTCCAAGATCTGCCAGGGCATGGCGACG
CAGTCGAGCCGGGACGGCTTCCCGTGGAGGGGCATGTGCGTCATCAGCAAGGCCGGCAACCCGATCCGGGTGCTC
TCGCCGAACAACTACGCCATCATCAACCCGGCCGGCTTCCAGCACTACTGGGGCCCGTACGTCGACAGGGTGTGG
GGCGAGTACGGCCGGACGCCGCTCTTCATCAACACGCAGTCGCCGGCCGGGACGGTGGCCTGCAAGGTGTCGGGG
GGCCTGCTGCGGTGCGGCGGCGGGGACAACCGCGGGTACGCCAAGCCGACGGCCAACGACATCTGGGGCTGCAAC
AGCGGGCCGTTCGAGAAGCACGCGGGCGACAACGCGGTGCACGTGGCCGTGATCCCGCGGCTGTGCGCCGCCTTC
GTCCGATCGACGCTGCTGCTAGGCGGCGGCAACGTCCAGCCGCGGGTGGCCTCGTCGCTCTACTACAAGACGACG
CCGACCAGCCACTACAGCCGGCTGGTCCACGAGCTCGAGGTGGACGGCAAGGGCTACGCCTTCCCGTACGACGAC
GTCAACCCGGACGGCGACGGGAACGCGTCGGGCGTGGTGGCTTCGGATGACCCGGAGGCTCTGACGATATATGTC
GGCGCGCCTCCGCCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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