Protein ID | Hirsu2|1831 |
Gene name | |
Location | Contig_1414:656..2186 |
Strand | - |
Gene length (bp) | 1530 |
Transcript length (bp) | 1344 |
Coding sequence length (bp) | 1344 |
Protein length (aa) | 448 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 27 | 22 |
2 | 72 | 94 | 22 |
3 | 288 | 310 | 22 |
4 | 330 | 352 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1831 MNPQVSALCFVRRFGLFFSCLFFISLFHRKLEWLGLQCRPQLAADPGARPPFDVTQTDSRPDRQVQESSVTVIWA ETLITTGACFLLAQGFFGVRAARERMERVRHTATNLAYSFLKATKATTDTVHGREQLELLVYECLALLTAFPIAL LEDARGNTCEPAVTRYCRDVAKTLKRLRSGDDAIVTGPVSSCESSSMAGGQNRPRYVTVDYFFELFSLQLLLEFR RQGLRVKLPSIAPQHILYKLRNHFENMVDSRNIDDRRTPIIRENIDMLGLAGRECGIFGMADIVPITFLWSVWVA GWIIAVYNPIRMCSMVVAWVPPQVQDTDSVVFPPFRTMLPMAGLSVLSAVVTAMMAEMWRMWDPFNAGINCYGWT QGIAMEIDAMLNEFSEYDADELVRPHAYMTPAYRGSSPPRGLVPGPLLAPSPLMDDEELGGSETPEDMAQTV* |
Coding | >Hirsu2|1831 ATGAACCCTCAAGTTTCCGCGCTCTGCTTCGTCCGCCGCTTTGGCCTTTTCTTCTCTTGTCTGTTCTTCATCTCT TTGTTCCATCGAAAGCTCGAGTGGCTCGGACTTCAATGCAGGCCACAACTTGCTGCCGACCCGGGCGCCCGCCCT CCTTTCGACGTTACCCAAACGGATAGCCGGCCCGATCGCCAGGTACAAGAGTCTTCGGTGACTGTCATTTGGGCC GAGACCCTCATCACCACCGGGGCCTGTTTTTTGTTGGCGCAAGGCTTCTTCGGCGTTCGGGCGGCGCGGGAGCGG ATGGAGCGAGTGAGGCACACAGCCACTAATTTGGCCTATTCTTTCCTGAAGGCGACCAAGGCCACAACCGATACA GTTCATGGGAGAGAACAGCTGGAGCTTCTCGTCTACGAGTGCCTCGCCCTACTCACCGCCTTCCCCATAGCTCTC CTCGAAGACGCGAGAGGAAACACCTGCGAGCCGGCCGTCACGCGGTACTGTCGAGATGTGGCCAAAACATTGAAG CGTCTCAGGAGTGGCGACGACGCAATCGTGACCGGCCCAGTTTCCTCGTGCGAATCCTCGTCGATGGCCGGCGGT CAGAACCGTCCTCGTTATGTCACAGTCGACTACTTTTTCGAGCTTTTCAGCCTTCAGCTGCTCCTAGAATTCAGA CGGCAGGGTCTGAGGGTCAAACTCCCTTCCATAGCCCCTCAGCACATCCTTTACAAGCTTCGGAATCACTTCGAA AACATGGTGGATTCGAGAAACATCGACGATCGAAGGACACCCATCATCCGCGAGAACATTGACATGCTGGGTCTG GCTGGGCGAGAATGCGGCATCTTCGGCATGGCGGACATTGTCCCCATCACCTTTCTCTGGTCTGTCTGGGTAGCC GGCTGGATCATCGCCGTGTACAACCCAATCCGTATGTGCAGCATGGTTGTGGCCTGGGTTCCACCCCAGGTGCAA GACACGGACTCCGTCGTGTTTCCCCCATTCAGGACGATGCTGCCCATGGCGGGCTTATCTGTCTTGAGCGCCGTG GTGACGGCGATGATGGCCGAGATGTGGAGGATGTGGGACCCCTTCAACGCAGGCATCAACTGTTATGGGTGGACG CAGGGCATCGCCATGGAGATTGACGCCATGCTGAACGAGTTCAGTGAGTACGACGCGGATGAGCTCGTGCGCCCT CACGCGTACATGACTCCAGCATACCGGGGGTCGTCGCCGCCGCGAGGACTGGTGCCAGGACCGTTGTTAGCGCCA TCGCCCCTGATGGACGATGAGGAACTCGGCGGCTCCGAGACGCCGGAAGACATGGCGCAGACGGTATAG |
Transcript | >Hirsu2|1831 ATGAACCCTCAAGTTTCCGCGCTCTGCTTCGTCCGCCGCTTTGGCCTTTTCTTCTCTTGTCTGTTCTTCATCTCT TTGTTCCATCGAAAGCTCGAGTGGCTCGGACTTCAATGCAGGCCACAACTTGCTGCCGACCCGGGCGCCCGCCCT CCTTTCGACGTTACCCAAACGGATAGCCGGCCCGATCGCCAGGTACAAGAGTCTTCGGTGACTGTCATTTGGGCC GAGACCCTCATCACCACCGGGGCCTGTTTTTTGTTGGCGCAAGGCTTCTTCGGCGTTCGGGCGGCGCGGGAGCGG ATGGAGCGAGTGAGGCACACAGCCACTAATTTGGCCTATTCTTTCCTGAAGGCGACCAAGGCCACAACCGATACA GTTCATGGGAGAGAACAGCTGGAGCTTCTCGTCTACGAGTGCCTCGCCCTACTCACCGCCTTCCCCATAGCTCTC CTCGAAGACGCGAGAGGAAACACCTGCGAGCCGGCCGTCACGCGGTACTGTCGAGATGTGGCCAAAACATTGAAG CGTCTCAGGAGTGGCGACGACGCAATCGTGACCGGCCCAGTTTCCTCGTGCGAATCCTCGTCGATGGCCGGCGGT CAGAACCGTCCTCGTTATGTCACAGTCGACTACTTTTTCGAGCTTTTCAGCCTTCAGCTGCTCCTAGAATTCAGA CGGCAGGGTCTGAGGGTCAAACTCCCTTCCATAGCCCCTCAGCACATCCTTTACAAGCTTCGGAATCACTTCGAA AACATGGTGGATTCGAGAAACATCGACGATCGAAGGACACCCATCATCCGCGAGAACATTGACATGCTGGGTCTG GCTGGGCGAGAATGCGGCATCTTCGGCATGGCGGACATTGTCCCCATCACCTTTCTCTGGTCTGTCTGGGTAGCC GGCTGGATCATCGCCGTGTACAACCCAATCCGTATGTGCAGCATGGTTGTGGCCTGGGTTCCACCCCAGGTGCAA GACACGGACTCCGTCGTGTTTCCCCCATTCAGGACGATGCTGCCCATGGCGGGCTTATCTGTCTTGAGCGCCGTG GTGACGGCGATGATGGCCGAGATGTGGAGGATGTGGGACCCCTTCAACGCAGGCATCAACTGTTATGGGTGGACG CAGGGCATCGCCATGGAGATTGACGCCATGCTGAACGAGTTCAGTGAGTACGACGCGGATGAGCTCGTGCGCCCT CACGCGTACATGACTCCAGCATACCGGGGGTCGTCGCCGCCGCGAGGACTGGTGCCAGGACCGTTGTTAGCGCCA TCGCCCCTGATGGACGATGAGGAACTCGGCGGCTCCGAGACGCCGGAAGACATGGCGCAGACGGTATAG |
Gene | >Hirsu2|1831 ATGAACCCTCAAGTTTCCGCGCTCTGCTTCGTCCGCCGCTTTGGCCTTTTCTTCTCTTGTCTGTTCTTCATCTCT TTGTTCCATCGAAAGCTCGAGTGGCTCGGACTTCAATGCAGGCCACAACTTGCTGCCGACCCGGGCGCCCGCCCT CCTTTCGACGTTACCCAAACGGATAGCCGGCCCGATCGCCAGGTACAAGAGTCTTCGGTGACTGTCATTTGGGCC GAGACCCTCATCACCACCGGGGCCTGTTTTTTGTTGGCGCAAGGCTTCTTCGGGTGAGTGCGGTGCACACCGTCT TCAGCGGCTGGCTAAGAGGACCTGTAGCGTTCGGGCGGCGCGGGAGCGGATGGAGCGAGTGAGGCACACAGCCAC TAATTTGGCCTATTCTTTCCTGAAGGCGACCAAGGCCACAACCGATACAGTTCATGGGAGAGAACAGCTGGAGCT TCTCGTCTAGTATGCGCCCCTTGGTTGAGCTAAATCAAAGAGTCCGCCGTTGACGAGCAATCAGCGAGTGCCTCG CCCTACTCACCGCCTTCCCCATAGCTCTCCTCGAAGACGCGAGAGGAAACACCTGCGAGCCGGCCGTCACGCGGT ACTGTCGAGATGTGGCCAAAACATTGAAGCGTCTCAGGAGTGGCGACGACGCAATCGTGACCGGCCCAGTTTCCT CGTGCGAATCCTCGTCGATGGCCGGCGGTCAGAACCGTCCTCGTTATGTCACAGTCGACTACTTTTTCGAGCTTT TCAGCCTTCAGCTGCTCCTAGAATTCAGACGGCAGGGTCTGAGGGTCAAACTCCCTTCCATAGCCCCTCAGCACA TCCTTTACAAGCTTCGGAATCACTTCGAAAACATGGTGGATTCGAGAAACATCGACGATCGAAGGACACCCATCA TCCGTGAGTCTGCTTAGGGAGCCCTGTCCATCATCTGGTGCCGGCTGCGGGCTGGGCGAGGTCGCTGACGCAAAC TGTTCCTCAGGCGAGAACATTGACATGCTGGGTCTGGCTGGGCGAGAATGCGGCATCTTCGGCATGGCGGACATT GTCCCCATCACCTTTCTCTGGTCTGTCTGGGTAGCCGGCTGGATCATCGCCGTGTACAACCCAATCCGTATGTGC AGCATGGTTGTGGCCTGGGTTCCACCCCAGGTGCAAGACACGGACTCCGTCGTGTTTCCCCCATTCAGGACGATG CTGCCCATGGCGGGCTTATCTGTCTTGAGCGCCGTGGTGACGGCGATGATGGCCGAGATGTGGAGGATGTGGGAC CCCTTCAACGCAGGCATCAACTGTTATGGGTGGACGCAGGGCATCGCCATGGAGATTGACGCCATGCTGAACGAG TTCAGTGAGTACGACGCGGATGAGCTCGTGCGCCCTCACGCGTACATGACTCCAGCATACCGGGGGTCGTCGCCG CCGCGAGGACTGGTGCCAGGACCGTTGTTAGCGCCATCGCCCCTGATGGACGATGAGGAACTCGGCGGCTCCGAG ACGCCGGAAGACATGGCGCAGACGGTATAG |