Protein ID | Hirsu2|1826 |
Gene name | |
Location | Contig_1411:1717..2941 |
Strand | - |
Gene length (bp) | 1224 |
Transcript length (bp) | 1224 |
Coding sequence length (bp) | 1224 |
Protein length (aa) | 408 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6FNP6|YNF8_CANGA | Vacuolar membrane protein CAGL0J10076g OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0J10076g PE=3 SV=1 | 152 | 272 | 4.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide|Transmembrane domain | 0.1131 | 0.1387 | 0.5159 | 0.432 | 0.1073 | 0.0103 | 0.1609 | 0.5044 | 0.1824 | 0.0036 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 29 | 0.976658 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 27 | 17 |
2 | 171 | 193 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 1833 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1826 MRPPSSLPPSALLLSTLASVAILSLPVMAQRVGNQPQLPAVSQSPAGLPAPSPTPASPQQASNPPSRPSSNGQRP PSSDRQQPSPPSEASDPPTPTPVTPTPTPTPARATPSDDKANPTITGPSSVSSGSELGAFPTLTRTNAIPQYPEP SVPPTQDAPFMQHSNLPDGTVFIVVGAVLGALGLSILLWRGIVSLLLHRSVKRAAMAQHTTNPKAGFPAPPAPFY KYTDQESSMSLGAGAAGAVPGRGVRRTNRGPIPSATPSHSNLFFSPTAVPNAAGARNSAFLPSGFYAAGAGSPAV NPANAISLHNLRPDSRGHYANASRHTLAGSPPDSPHYPARRDPSAMSTSSLHLNMPPGQQRAPSAYLEDLLADDP GAFPPQHMPPTSNGPSSTASLAGRADSLPHRI* |
Coding | >Hirsu2|1826 ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC GACAGCCTGCCCCACCGGATTTGA |
Transcript | >Hirsu2|1826 ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC GACAGCCTGCCCCACCGGATTTGA |
Gene | >Hirsu2|1826 ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC GACAGCCTGCCCCACCGGATTTGA |