Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1826
Gene name
LocationContig_1411:1717..2941
Strand-
Gene length (bp)1224
Transcript length (bp)1224
Coding sequence length (bp)1224
Protein length (aa) 408

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6FNP6|YNF8_CANGA Vacuolar membrane protein CAGL0J10076g OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0J10076g PE=3 SV=1 152 272 4.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide|Transmembrane domain 0.1131 0.1387 0.5159 0.432 0.1073 0.0103 0.1609 0.5044 0.1824 0.0036

SignalP

SignalP signal predicted Location Score
Yes 1 - 29 0.976658

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 171 193 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1833
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7594
Ophiocordyceps australis map64 (Brazil) OphauB2|3644
Ophiocordyceps camponoti-floridani Ophcf2|05048
Ophiocordyceps camponoti-rufipedis Ophun1|1086
Ophiocordyceps kimflemingae Ophio5|6466
Ophiocordyceps subramaniannii Hirsu2|1826 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1826
MRPPSSLPPSALLLSTLASVAILSLPVMAQRVGNQPQLPAVSQSPAGLPAPSPTPASPQQASNPPSRPSSNGQRP
PSSDRQQPSPPSEASDPPTPTPVTPTPTPTPARATPSDDKANPTITGPSSVSSGSELGAFPTLTRTNAIPQYPEP
SVPPTQDAPFMQHSNLPDGTVFIVVGAVLGALGLSILLWRGIVSLLLHRSVKRAAMAQHTTNPKAGFPAPPAPFY
KYTDQESSMSLGAGAAGAVPGRGVRRTNRGPIPSATPSHSNLFFSPTAVPNAAGARNSAFLPSGFYAAGAGSPAV
NPANAISLHNLRPDSRGHYANASRHTLAGSPPDSPHYPARRDPSAMSTSSLHLNMPPGQQRAPSAYLEDLLADDP
GAFPPQHMPPTSNGPSSTASLAGRADSLPHRI*
Coding >Hirsu2|1826
ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC
CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC
CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG
CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG
ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG
GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC
AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC
GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC
GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC
AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA
CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC
AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC
AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC
ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT
CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG
GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC
GACAGCCTGCCCCACCGGATTTGA
Transcript >Hirsu2|1826
ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC
CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC
CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG
CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG
ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG
GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC
AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC
GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC
GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC
AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA
CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC
AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC
AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC
ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT
CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG
GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC
GACAGCCTGCCCCACCGGATTTGA
Gene >Hirsu2|1826
ATGCGGCCGCCCAGCTCGTTGCCGCCCTCGGCTCTGCTGCTCTCGACTCTGGCCTCGGTCGCCATCTTGTCCCTC
CCCGTCATGGCTCAGAGAGTCGGCAACCAGCCTCAGCTCCCGGCCGTCAGCCAAAGCCCCGCCGGCTTGCCCGCC
CCGTCGCCTACTCCCGCGAGCCCGCAACAAGCGTCGAATCCGCCGTCCCGTCCGAGCAGCAACGGCCAGAGACCG
CCCAGCTCGGACCGGCAGCAGCCCTCGCCGCCGTCCGAGGCCTCGGACCCTCCGACGCCGACGCCCGTCACGCCG
ACGCCGACGCCGACGCCCGCCCGCGCCACGCCCAGCGACGACAAGGCGAACCCTACAATTACCGGCCCCAGCTCG
GTCAGCTCCGGCAGCGAACTCGGCGCCTTCCCGACCCTGACGAGGACCAACGCGATCCCCCAGTATCCCGAACCC
AGCGTCCCGCCCACCCAGGACGCCCCCTTTATGCAGCACTCCAATCTGCCCGACGGCACCGTCTTTATCGTCGTC
GGCGCCGTCCTCGGCGCCCTGGGACTCTCCATCCTGCTCTGGCGCGGCATCGTCAGCCTTCTCCTCCATCGGTCC
GTCAAACGCGCGGCCATGGCCCAACATACCACCAACCCCAAGGCCGGCTTCCCGGCGCCGCCCGCGCCCTTCTAC
AAGTACACCGACCAGGAATCCAGCATGTCGCTGGGCGCCGGCGCCGCCGGCGCCGTCCCCGGCCGCGGCGTTCGA
CGCACCAACCGGGGGCCCATTCCTTCCGCCACCCCGAGCCACTCCAACCTCTTCTTCTCGCCCACGGCCGTCCCC
AACGCCGCCGGCGCCCGCAACTCGGCCTTCCTGCCCTCGGGCTTCTACGCCGCCGGCGCCGGCTCGCCCGCCGTC
AACCCCGCCAACGCCATCAGCCTGCACAACCTGCGCCCGGATTCCAGGGGCCACTACGCCAATGCGTCCCGCCAC
ACGCTGGCGGGCTCGCCGCCCGACTCGCCCCATTATCCGGCGCGCCGGGACCCCAGCGCCATGAGCACCAGCTCT
CTGCACCTCAACATGCCGCCCGGCCAACAACGAGCACCTAGTGCGTACCTCGAAGACCTCCTGGCCGACGACCCG
GGCGCCTTCCCGCCGCAGCACATGCCGCCCACGTCCAACGGCCCGAGCAGCACGGCGAGCCTCGCGGGCAGGGCC
GACAGCCTGCCCCACCGGATTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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