Protein ID | Hirsu2|182 |
Gene name | |
Location | Contig_103:19976..20439 |
Strand | - |
Gene length (bp) | 463 |
Transcript length (bp) | 351 |
Coding sequence length (bp) | 351 |
Protein length (aa) | 117 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08555 | FAM32A | FAM32A | 1.5E-07 | 5 | 75 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q92363|YEJL_SCHPO | Uncharacterized protein C31G5.21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=N118 PE=4 SV=1 | 59 | 116 | 3.0E-11 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.4067 | 0.7582 | 0.0318 | 0.0389 | 0.0364 | 0.0059 | 0.1142 | 0.0634 | 0.2133 | 0.0018 |
Orthofinder run ID | 4 |
Orthogroup | 1831 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|182 MPSDDYAAAVGGALRIKGGKVQKKKKKAKKGSDPDPKLAAEQPPPEDDGDQEPAQAHKTETERRFEEVKKKRLLQ MSQASGARSDLLKTHKERVEELNTYLSKLSEHHDMPKIGPG* |
Coding | >Hirsu2|182 ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCCTCCTGCAG ATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAAGACGCACAAGGAACGGGTCGAGGAGCTCAACACCTAC CTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGATCGGGCCCGGCTAG |
Transcript | >Hirsu2|182 ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCCTCCTGCAG ATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAAGACGCACAAGGAACGGGTCGAGGAGCTCAACACCTAC CTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGATCGGGCCCGGCTAG |
Gene | >Hirsu2|182 ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCGTGAGTTCT CCGTTCTCCGCCCGGCGTGTGCGTGTGTGTGTGTGTGTGTTCGTGTGTGGGTGGCTGTGCGTAGCTTTGCTCTTC GCTGACGAGTGCGTCCGCGAATATCCAGCTCCTGCAGATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAA GACGCACAAGGAACGGGTCGAGGAGCTCAACACCTACCTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGAT CGGGCCCGGCTAG |