Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|182
Gene name
LocationContig_103:19976..20439
Strand-
Gene length (bp)463
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08555 FAM32A FAM32A 1.5E-07 5 75

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q92363|YEJL_SCHPO Uncharacterized protein C31G5.21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=N118 PE=4 SV=1 59 116 3.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4067 0.7582 0.0318 0.0389 0.0364 0.0059 0.1142 0.0634 0.2133 0.0018

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1831
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5588
Ophiocordyceps australis map64 (Brazil) OphauB2|1030
Ophiocordyceps camponoti-floridani Ophcf2|06763
Ophiocordyceps camponoti-rufipedis Ophun1|5759
Ophiocordyceps kimflemingae Ophio5|1412
Ophiocordyceps subramaniannii Hirsu2|182 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|182
MPSDDYAAAVGGALRIKGGKVQKKKKKAKKGSDPDPKLAAEQPPPEDDGDQEPAQAHKTETERRFEEVKKKRLLQ
MSQASGARSDLLKTHKERVEELNTYLSKLSEHHDMPKIGPG*
Coding >Hirsu2|182
ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG
AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC
CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCCTCCTGCAG
ATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAAGACGCACAAGGAACGGGTCGAGGAGCTCAACACCTAC
CTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGATCGGGCCCGGCTAG
Transcript >Hirsu2|182
ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG
AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC
CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCCTCCTGCAG
ATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAAGACGCACAAGGAACGGGTCGAGGAGCTCAACACCTAC
CTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGATCGGGCCCGGCTAG
Gene >Hirsu2|182
ATGCCGTCAGACGACTACGCCGCCGCCGTCGGCGGCGCCCTGCGCATCAAGGGCGGCAAGGTGCAGAAGAAGAAG
AAGAAGGCCAAGAAGGGCAGCGACCCGGACCCGAAGCTCGCCGCGGAGCAGCCGCCGCCGGAAGACGACGGGGAC
CAAGAGCCGGCGCAGGCGCACAAGACGGAAACCGAGCGCCGCTTCGAGGAGGTCAAGAAGAAGCGCGTGAGTTCT
CCGTTCTCCGCCCGGCGTGTGCGTGTGTGTGTGTGTGTGTTCGTGTGTGGGTGGCTGTGCGTAGCTTTGCTCTTC
GCTGACGAGTGCGTCCGCGAATATCCAGCTCCTGCAGATGAGCCAGGCCTCGGGCGCGCGGTCGGATCTGCTCAA
GACGCACAAGGAACGGGTCGAGGAGCTCAACACCTACCTGTCGAAGCTGAGCGAGCACCACGACATGCCCAAGAT
CGGGCCCGGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail