Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1804
Gene name
LocationContig_1408:1143..2118
Strand-
Gene length (bp)975
Transcript length (bp)975
Coding sequence length (bp)975
Protein length (aa) 325

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1911 0.0693 0.926 0.1446 0.0582 0.0047 0.415 0.1463 0.3501 0.0026

SignalP

SignalP signal predicted Location Score
Yes 1 - 25 0.999805

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8915
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1804 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1804
MYKHSAFQAVFVALCILLCFRACLAAPAGLEKRRPGRNGPARNLNRYHKSHGIPLVGLADHHDDTPGAPGGHYEN
AHGRFSEPTSQLPSSNKGASTWAKYNPFGKKGKDKKSAERSDRNEEQWEEIDLGLWVNDNAQEEVPKSGILDRIK
NKPSKKKANKNSAKQGDSEDGTVEQTDIYASVNKNAHKVSKPNFFRTLKNRFFRKNRDKSAAKKGDDEDGTVEEN
DVHKSNNEPIYDTIPDPSSFGKTKPVGKKNEGNNDIHMSDEDDIYDFLEDPRSFGQVKPEPFGKNQDNKSAKQSG
GEGEASEENDLYMSADGPDIPSPP*
Coding >Hirsu2|1804
ATGTACAAGCACTCGGCGTTCCAGGCCGTCTTCGTTGCGCTCTGCATCCTCCTATGCTTCCGCGCCTGTCTGGCG
GCCCCGGCTGGCCTCGAAAAACGGAGGCCGGGGAGGAACGGGCCTGCCAGGAATCTCAACCGATATCATAAAAGT
CACGGAATCCCTCTTGTCGGCCTAGCCGATCACCACGACGACACCCCTGGCGCTCCTGGCGGCCACTACGAAAAC
GCGCACGGGAGGTTTTCGGAACCAACTTCCCAGCTTCCCTCTTCGAACAAAGGCGCTTCCACTTGGGCCAAATAC
AACCCGTTCGGGAAGAAGGGCAAGGACAAGAAGAGCGCAGAGCGAAGTGACAGGAATGAGGAACAGTGGGAAGAA
ATCGACCTTGGTCTATGGGTCAACGACAACGCCCAGGAGGAAGTTCCAAAATCGGGAATACTTGACAGAATAAAG
AACAAGCCTTCCAAGAAGAAGGCGAACAAAAACAGCGCGAAACAAGGCGACAGCGAGGATGGAACTGTGGAACAG
ACCGATATCTATGCATCGGTCAACAAGAATGCCCACAAGGTTTCAAAGCCAAATTTTTTTCGTACATTGAAGAAC
AGGTTCTTCCGGAAGAATCGGGACAAAAGCGCCGCGAAAAAGGGCGATGACGAGGATGGAACCGTGGAAGAAAAT
GACGTTCACAAATCGAACAACGAGCCTATCTACGATACGATTCCAGACCCGAGTTCCTTCGGTAAAACCAAGCCT
GTCGGGAAGAAAAACGAGGGAAACAATGACATCCATATGTCGGACGAGGATGATATCTACGATTTTCTTGAAGAT
CCGAGGTCCTTCGGTCAAGTCAAACCCGAGCCTTTCGGGAAGAATCAGGATAACAAGAGCGCAAAACAGAGCGGC
GGCGAGGGCGAGGCATCGGAAGAAAATGACTTGTATATGTCGGCCGACGGTCCTGATATTCCGTCGCCGCCTTGA
Transcript >Hirsu2|1804
ATGTACAAGCACTCGGCGTTCCAGGCCGTCTTCGTTGCGCTCTGCATCCTCCTATGCTTCCGCGCCTGTCTGGCG
GCCCCGGCTGGCCTCGAAAAACGGAGGCCGGGGAGGAACGGGCCTGCCAGGAATCTCAACCGATATCATAAAAGT
CACGGAATCCCTCTTGTCGGCCTAGCCGATCACCACGACGACACCCCTGGCGCTCCTGGCGGCCACTACGAAAAC
GCGCACGGGAGGTTTTCGGAACCAACTTCCCAGCTTCCCTCTTCGAACAAAGGCGCTTCCACTTGGGCCAAATAC
AACCCGTTCGGGAAGAAGGGCAAGGACAAGAAGAGCGCAGAGCGAAGTGACAGGAATGAGGAACAGTGGGAAGAA
ATCGACCTTGGTCTATGGGTCAACGACAACGCCCAGGAGGAAGTTCCAAAATCGGGAATACTTGACAGAATAAAG
AACAAGCCTTCCAAGAAGAAGGCGAACAAAAACAGCGCGAAACAAGGCGACAGCGAGGATGGAACTGTGGAACAG
ACCGATATCTATGCATCGGTCAACAAGAATGCCCACAAGGTTTCAAAGCCAAATTTTTTTCGTACATTGAAGAAC
AGGTTCTTCCGGAAGAATCGGGACAAAAGCGCCGCGAAAAAGGGCGATGACGAGGATGGAACCGTGGAAGAAAAT
GACGTTCACAAATCGAACAACGAGCCTATCTACGATACGATTCCAGACCCGAGTTCCTTCGGTAAAACCAAGCCT
GTCGGGAAGAAAAACGAGGGAAACAATGACATCCATATGTCGGACGAGGATGATATCTACGATTTTCTTGAAGAT
CCGAGGTCCTTCGGTCAAGTCAAACCCGAGCCTTTCGGGAAGAATCAGGATAACAAGAGCGCAAAACAGAGCGGC
GGCGAGGGCGAGGCATCGGAAGAAAATGACTTGTATATGTCGGCCGACGGTCCTGATATTCCGTCGCCGCCTTGA
Gene >Hirsu2|1804
ATGTACAAGCACTCGGCGTTCCAGGCCGTCTTCGTTGCGCTCTGCATCCTCCTATGCTTCCGCGCCTGTCTGGCG
GCCCCGGCTGGCCTCGAAAAACGGAGGCCGGGGAGGAACGGGCCTGCCAGGAATCTCAACCGATATCATAAAAGT
CACGGAATCCCTCTTGTCGGCCTAGCCGATCACCACGACGACACCCCTGGCGCTCCTGGCGGCCACTACGAAAAC
GCGCACGGGAGGTTTTCGGAACCAACTTCCCAGCTTCCCTCTTCGAACAAAGGCGCTTCCACTTGGGCCAAATAC
AACCCGTTCGGGAAGAAGGGCAAGGACAAGAAGAGCGCAGAGCGAAGTGACAGGAATGAGGAACAGTGGGAAGAA
ATCGACCTTGGTCTATGGGTCAACGACAACGCCCAGGAGGAAGTTCCAAAATCGGGAATACTTGACAGAATAAAG
AACAAGCCTTCCAAGAAGAAGGCGAACAAAAACAGCGCGAAACAAGGCGACAGCGAGGATGGAACTGTGGAACAG
ACCGATATCTATGCATCGGTCAACAAGAATGCCCACAAGGTTTCAAAGCCAAATTTTTTTCGTACATTGAAGAAC
AGGTTCTTCCGGAAGAATCGGGACAAAAGCGCCGCGAAAAAGGGCGATGACGAGGATGGAACCGTGGAAGAAAAT
GACGTTCACAAATCGAACAACGAGCCTATCTACGATACGATTCCAGACCCGAGTTCCTTCGGTAAAACCAAGCCT
GTCGGGAAGAAAAACGAGGGAAACAATGACATCCATATGTCGGACGAGGATGATATCTACGATTTTCTTGAAGAT
CCGAGGTCCTTCGGTCAAGTCAAACCCGAGCCTTTCGGGAAGAATCAGGATAACAAGAGCGCAAAACAGAGCGGC
GGCGAGGGCGAGGCATCGGAAGAAAATGACTTGTATATGTCGGCCGACGGTCCTGATATTCCGTCGCCGCCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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