Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1801
Gene name
Location	Contig_1406:5720..6841
Strand	-
Gene length (bp)	1121
Transcript length (bp)	1008
Coding sequence length (bp)	1008
Protein length (aa)	336

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07690	MFS_1	Major Facilitator Superfamily	2.4E-19	2	291

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9D2V8\|MFS10_MOUSE	Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1	2	309	5.0E-35
sp\|Q0P5M9\|MFS10_BOVIN	Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1	1	333	2.0E-28
sp\|Q14728\|MFS10_HUMAN	Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1	1	308	1.0E-25
sp\|P02981\|TCR3_ECOLX	Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1	1	298	2.0E-08
sp\|P02982\|TCR1_ECOLX	Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2	3	298	3.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9D2V8\|MFS10_MOUSE	Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1	2	309	5.0E-35
sp\|Q0P5M9\|MFS10_BOVIN	Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1	1	333	2.0E-28
sp\|Q14728\|MFS10_HUMAN	Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1	1	308	1.0E-25
sp\|P02981\|TCR3_ECOLX	Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1	1	298	2.0E-08
sp\|P02982\|TCR1_ECOLX	Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2	3	298	3.0E-08
sp\|P51563\|TCR7_VIBAN	Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1	3	298	5.0E-08

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GO

GO Term	Description	Terminal node
GO:0055085	transmembrane transport	Yes
GO:0022857	transmembrane transporter activity	Yes
GO:0009987	cellular process	No
GO:0051179	localization	No
GO:0005215	transporter activity	No
GO:0008150	biological_process	No
GO:0051234	establishment of localization	No
GO:0003674	molecular_function	No
GO:0006810	transport	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	80	102	22
3	112	134	22
4	146	168	22
5	191	208	17
6	215	232	17
7	242	264	22
8	285	302	17
9	306	325	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1801 MASPVIGRLSDRYGRRTALLASMCGNMVSVLLWVVAVDFRTFVASRVIXXXXXXXXXXXXQLATAIASDISDDAS RSPTMAIIGACFCVAFTFGPALGAWLSGVAVLAANPFALAAGFSLALVVVETAYLYLCLPETLPALXXXXXXXXX XXXXXXXXXXXXFFLLFFSGMESSLSFMTYDLFGFGSSKNGRLLGFIGLVASLLQGGVTRRLAPLLSVRLGLVAC LASFALLGRLSTVGGLYAAATCLAATSATVVTGLNALSSFDAAEDERGSKLGILRSWGQLGRGLGPVFFTSVYWW AGREYAYNVGTTGILLVTAAVLVGLKTPKAAAKPK*
Coding	>Hirsu2\|1801 ATGGCCTCGCCCGTCATCGGCCGCCTCTCGGACCGCTACGGGCGGCGGACGGCGCTGCTGGCGTCCATGTGCGGC AACATGGTGTCGGTGCTGCTGTGGGTGGTGGCCGTCGACTTCCGCACCTTCGTCGCCAGCCGCGTCATCGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCTGGCGACGGCCATCGCCAGCGACATCTCGGACGACGCGTCG CGCAGCCCGACCATGGCCATCATCGGCGCCTGCTTCTGCGTCGCCTTCACCTTCGGCCCGGCCCTGGGCGCCTGG CTCAGCGGCGTCGCCGTCCTGGCCGCCAACCCCTTCGCCCTGGCCGCCGGCTTCAGCCTGGCCCTGGTCGTCGTC GAGACGGCCTACCTCTACCTGTGCCTGCCCGAGACCCTGCCGGCGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCTTCCTCCTCTTCTTCTCCGGCATGGAGAGCTCGCTG TCCTTCATGACGTACGACCTGTTCGGCTTCGGCTCCAGCAAGAACGGCCGGCTGCTGGGCTTCATCGGCCTGGTC GCGTCGCTGCTGCAGGGCGGCGTCACGCGCCGCCTGGCCCCGCTGCTGTCGGTCCGCCTCGGCCTCGTCGCCTGC CTGGCCTCCTTCGCCCTGCTGGGCCGCCTCTCGACCGTCGGCGGCCTGTACGCGGCCGCCACCTGCCTGGCCGCC ACCTCGGCCACCGTCGTCACCGGCCTCAACGCCCTGAGCAGCTTCGACGCCGCCGAGGACGAGCGCGGCAGCAAG CTGGGCATCCTCCGCAGCTGGGGCCAGCTCGGCCGCGGCCTCGGGCCCGTCTTCTTCACCAGCGTCTACTGGTGG GCCGGCCGCGAGTACGCCTACAACGTCGGCACCACCGGCATCCTCCTCGTCACCGCCGCCGTCCTGGTGGGGCTC AAGACGCCCAAGGCGGCGGCCAAGCCCAAGTAG
Transcript	>Hirsu2\|1801 ATGGCCTCGCCCGTCATCGGCCGCCTCTCGGACCGCTACGGGCGGCGGACGGCGCTGCTGGCGTCCATGTGCGGC AACATGGTGTCGGTGCTGCTGTGGGTGGTGGCCGTCGACTTCCGCACCTTCGTCGCCAGCCGCGTCATCGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCTGGCGACGGCCATCGCCAGCGACATCTCGGACGACGCGTCG CGCAGCCCGACCATGGCCATCATCGGCGCCTGCTTCTGCGTCGCCTTCACCTTCGGCCCGGCCCTGGGCGCCTGG CTCAGCGGCGTCGCCGTCCTGGCCGCCAACCCCTTCGCCCTGGCCGCCGGCTTCAGCCTGGCCCTGGTCGTCGTC GAGACGGCCTACCTCTACCTGTGCCTGCCCGAGACCCTGCCGGCGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCTTCCTCCTCTTCTTCTCCGGCATGGAGAGCTCGCTG TCCTTCATGACGTACGACCTGTTCGGCTTCGGCTCCAGCAAGAACGGCCGGCTGCTGGGCTTCATCGGCCTGGTC GCGTCGCTGCTGCAGGGCGGCGTCACGCGCCGCCTGGCCCCGCTGCTGTCGGTCCGCCTCGGCCTCGTCGCCTGC CTGGCCTCCTTCGCCCTGCTGGGCCGCCTCTCGACCGTCGGCGGCCTGTACGCGGCCGCCACCTGCCTGGCCGCC ACCTCGGCCACCGTCGTCACCGGCCTCAACGCCCTGAGCAGCTTCGACGCCGCCGAGGACGAGCGCGGCAGCAAG CTGGGCATCCTCCGCAGCTGGGGCCAGCTCGGCCGCGGCCTCGGGCCCGTCTTCTTCACCAGCGTCTACTGGTGG GCCGGCCGCGAGTACGCCTACAACGTCGGCACCACCGGCATCCTCCTCGTCACCGCCGCCGTCCTGGTGGGGCTC AAGACGCCCAAGGCGGCGGCCAAGCCCAAGTAG
Gene	>Hirsu2\|1801 ATGGCCTCGCCCGTCATCGGCCGCCTCTCGGACCGCTACGGGCGGCGGACGGCGCTGCTGGCGTCCATGTGCGGC AACATGGTGTCGGTGCTGCTGTGGGTGGTGGCCGTCGACTTCCGCACCTTCGTCGCCAGCCGCGTCATCGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCTGGCGACGGCCATCGCCAGCGACATCTCGGACGACGCGTCG CGCAGCCCGACCATGGCCATCATCGGCGCCTGCTTCTGCGTCGCCTTCACCTTCGGCCCGGCCCTGGGCGCCTGG CTCAGCGGCGTCGCCGTCCTGGCCGCCAACCCCTTCGCCCTGGCCGCCGGCTTCAGCCTGGCCCTGGTCGTCGTC GAGACGGCCTACCTCTACCTGTGCCTGCCCGAGACCCTGCCGGCGCTGGTGGGCAACGACAAGAAGAAGAGGGAG ACGGCGAACAAGACGGGGCGGGGCGGCGATGACGACGACGGGACCGCGAGCCCCGAGGCCGGCAAGGCCGCCGCC GCCGCCGACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCT TCTTCCTCCTCTTCTTCTCCGGCATGGAGAGCTCGCTGTCCTTCATGACGTACGACCTGTTCGGCTTCGGCTCCA GCAAGAACGGCCGGCTGCTGGGCTTCATCGGCCTGGTCGCGTCGCTGCTGCAGGGCGGCGTCACGCGCCGCCTGG CCCCGCTGCTGTCGGTCCGCCTCGGCCTCGTCGCCTGCCTGGCCTCCTTCGCCCTGCTGGGCCGCCTCTCGACCG TCGGCGGCCTGTACGCGGCCGCCACCTGCCTGGCCGCCACCTCGGCCACCGTCGTCACCGGCCTCAACGCCCTGA GCAGCTTCGACGCCGCCGAGGACGAGCGCGGCAGCAAGCTGGGCATCCTCCGCAGCTGGGGCCAGCTCGGCCGCG GCCTCGGGCCCGTCTTCTTCACCAGCGTCTACTGGTGGGCCGGCCGCGAGTACGCCTACAACGTCGGCACCACCG GCATCCTCCTCGTCACCGCCGCCGTCCTGGTGGGGCTCAAGACGCCCAAGGCGGCGGCCAAGCCCAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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