Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|18
Gene name
LocationContig_10:40119..40776
Strand+
Gene length (bp)657
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 6.6E-06 10 55

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5127 0.7556 0.041 0.1164 0.2323 0.0057 0.0182 0.1606 0.0454 0.002

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6540
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1549
Ophiocordyceps australis map64 (Brazil) OphauB2|3473
Ophiocordyceps subramaniannii Hirsu2|18 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|18
MHRVAESRLLSASEKEQRFRVFWIAFSFDVHTSTRSGRPCMQNANDIGIDLPSASPRDNLGILVNSNGSAVLNFL
SAKAQFSVLHGKVYDRLFTTSAVEKSKTVLDGDIQELGEELQRLGRLIPGISAGTQEPHRIISSNWNHEQHRHLL
SLLLGFHSCAMTVYSASWHHHLHLIKARGPTKADLAVAFPHFDRCVQAAYEIVDLLSLISRNETSFIW*
Coding >Hirsu2|18
ATGCACCGTGTAGCCGAATCACGACTATTGTCGGCCAGCGAGAAGGAGCAAAGATTCCGTGTCTTCTGGATCGCC
TTTAGCTTCGACGTCCACACCTCGACCCGGTCCGGCCGCCCTTGTATGCAAAACGCCAACGATATCGGCATCGAC
CTCCCGTCGGCGTCTCCAAGAGACAACCTAGGAATCCTTGTCAACTCCAACGGCAGCGCGGTTCTCAATTTCCTG
TCTGCCAAAGCCCAGTTCTCGGTTCTCCATGGTAAAGTCTACGATCGCCTCTTCACTACCTCGGCAGTAGAAAAG
TCAAAGACTGTGCTGGATGGTGATATCCAAGAGCTCGGGGAGGAGCTTCAGCGGCTCGGGCGCTTAATTCCAGGC
ATCTCCGCTGGCACTCAGGAACCTCACCGCATCATTTCTAGTAACTGGAATCACGAGCAGCACCGTCATCTTTTG
AGCCTGCTGCTGGGGTTCCACAGCTGCGCCATGACCGTTTATAGTGCCTCGTGGCATCACCACTTGCATCTCATC
AAAGCAAGGGGTCCAACAAAGGCGGACCTTGCTGTTGCTTTTCCCCATTTCGACCGCTGCGTCCAGGCCGCCTAT
GAGATTGTCGATTTGCTGTCGCTCATATCCCGGAACGAGACGAGCTTCATCTGGTAA
Transcript >Hirsu2|18
ATGCACCGTGTAGCCGAATCACGACTATTGTCGGCCAGCGAGAAGGAGCAAAGATTCCGTGTCTTCTGGATCGCC
TTTAGCTTCGACGTCCACACCTCGACCCGGTCCGGCCGCCCTTGTATGCAAAACGCCAACGATATCGGCATCGAC
CTCCCGTCGGCGTCTCCAAGAGACAACCTAGGAATCCTTGTCAACTCCAACGGCAGCGCGGTTCTCAATTTCCTG
TCTGCCAAAGCCCAGTTCTCGGTTCTCCATGGTAAAGTCTACGATCGCCTCTTCACTACCTCGGCAGTAGAAAAG
TCAAAGACTGTGCTGGATGGTGATATCCAAGAGCTCGGGGAGGAGCTTCAGCGGCTCGGGCGCTTAATTCCAGGC
ATCTCCGCTGGCACTCAGGAACCTCACCGCATCATTTCTAGTAACTGGAATCACGAGCAGCACCGTCATCTTTTG
AGCCTGCTGCTGGGGTTCCACAGCTGCGCCATGACCGTTTATAGTGCCTCGTGGCATCACCACTTGCATCTCATC
AAAGCAAGGGGTCCAACAAAGGCGGACCTTGCTGTTGCTTTTCCCCATTTCGACCGCTGCGTCCAGGCCGCCTAT
GAGATTGTCGATTTGCTGTCGCTCATATCCCGGAACGAGACGAGCTTCATCTGGTAA
Gene >Hirsu2|18
ATGCACCGTGTAGCCGAATCACGACTATTGTCGGCCAGCGAGAAGGAGCAAAGATTCCGTGTCTTCTGGATCGCC
TTTAGCTTCGACGTCCACACCTCGACCCGGTCCGGCCGCCCTTGTATGCAAAACGCCAACGATATCGGCATCGAC
CTCCCGTCGGCGTCTCCAAGAGACAACCTAGGAATCCTTGTCAACTCCAACGGCAGCGCGGTTCTCAATTTCCTG
TCTGCCAAAGCCCAGTTCTCGGTTCTCCATGGTAAAGTCTACGATCGCCTCTTCACTACCTCGGCAGTAGAAAAG
TCAAAGACTGTGCTGGATGGTGATATCCAAGAGCTCGGGGAGGAGCTTCAGCGGCTCGGGCGCTTAATTCCAGGC
ATCTCCGCTGGCACTCAGGAACCTCACCGCATCATTTCTAGTAACTGGAATCACGAGCAGCACCGTCATCTTTTG
AGCCTGCTGCTGGGGTTCCACAGCTGCGCCATGACCGTTTATAGTGCCTCGTGGCATCACCACTTGCATCTCATC
AAAGCAAGGGGTCCAACAAAGGCGGACCTTGCTGTTGCTTTTCCCCATTTCGACCGCTGCGTCCAGGCCGCCTAT
GAGATTGTCGATTTGCTGTCGCTCATATCCCGGAACGAGACGAGCTTCATCTGGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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