© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|1794 |
| Gene name | |
| Location | Contig_1404:3152..4452 |
| Strand | - |
| Gene length (bp) | 1300 |
| Transcript length (bp) | 1236 |
| Coding sequence length (bp) | 1236 |
| Protein length (aa) | 412 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12400 | STIMATE | STIMATE family | 7.8E-41 | 178 | 305 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12042|YP162_YEAST | Vacuolar membrane protein YPL162C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL162C PE=1 SV=1 | 82 | 338 | 2.0E-33 |
| sp|Q86TL2|STIMA_HUMAN | Store-operated calcium entry regulator STIMATE OS=Homo sapiens GN=TMEM110 PE=1 SV=1 | 83 | 367 | 2.0E-30 |
| sp|Q3UF25|STIMA_MOUSE | Store-operated calcium entry regulator STIMATE OS=Mus musculus GN=Tmem110 PE=2 SV=1 | 83 | 367 | 1.0E-28 |
| sp|Q7TSW6|STIMA_RAT | Store-operated calcium entry regulator STIMATE OS=Rattus norvegicus GN=Tmem110 PE=2 SV=1 | 83 | 367 | 1.0E-28 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 87 | 109 | 22 |
| 2 | 122 | 144 | 22 |
| 3 | 180 | 202 | 22 |
| 4 | 238 | 260 | 22 |
| 5 | 280 | 299 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1794 MQPPSLAVAAVNDAVASLSSGAASAAASTPASAALETAATAVATALASAAASAAVSATSSSAAAAAAATSASDGS PTHEEPQGECRLLGSFALLVQAALGALALLSLVYKRWRERPQRPVKIWFFDVSKQVFGSVLVHIANIFMSMLTSG RFSIGLEPAVTQRLLARGEDDVYVPNPCSFYLLNLAIDTTLGIPILILLLRILTGLAAMTTFGKPFESIQSGHYG NPPNAWWWLKQSIIYFGGLFGMKLCVLIIFLLMPWISKVGDWALGWTEGNERLQIAFVMMIFPLVMNGLQYYIID SFIKKKETEHEHLPSEDPDEARRRYDDRGTHLRGHGPDGESDGGDGGDDGQDERRTKPAGPAKPGHRTRRSAEGE YDPEVDGDAPTIIGSSSSRRIQRAKAGGGADPFPKD* |
| Coding | >Hirsu2|1794 ATGCAGCCTCCGTCGCTCGCCGTCGCCGCCGTCAACGATGCCGTCGCCTCCTTGAGCTCCGGGGCGGCCTCGGCT GCAGCCTCGACGCCCGCATCCGCCGCCTTGGAGACGGCAGCGACGGCCGTGGCAACCGCTCTCGCCTCCGCCGCC GCCTCCGCCGCCGTCTCCGCCACCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCACCTCCGCATCCGACGGGAGC CCGACACATGAAGAGCCGCAGGGCGAGTGCCGCCTGCTCGGCTCGTTTGCCCTGCTCGTCCAGGCCGCTCTCGGC GCCCTCGCCCTGCTCTCCCTGGTCTACAAGCGCTGGCGGGAGAGGCCCCAGCGGCCCGTCAAGATCTGGTTCTTC GACGTCTCCAAGCAGGTCTTCGGCTCCGTCCTCGTCCACATTGCCAACATCTTCATGTCCATGTTGACCAGCGGC CGCTTCTCCATCGGCTTGGAGCCCGCCGTGACCCAGCGGCTGCTGGCGCGGGGCGAAGACGACGTCTACGTCCCC AACCCCTGCTCCTTCTATCTCCTCAACCTGGCCATCGATACCACCCTCGGCATCCCCATCCTCATCCTCCTGCTG CGCATCCTGACCGGGCTGGCGGCCATGACGACGTTCGGGAAGCCCTTCGAGTCCATCCAGTCCGGCCACTACGGC AACCCCCCCAATGCCTGGTGGTGGCTCAAGCAGTCCATCATCTACTTCGGCGGCCTCTTCGGCATGAAGCTCTGC GTCCTCATCATCTTCCTCCTCATGCCCTGGATCTCCAAGGTCGGCGACTGGGCCCTCGGGTGGACCGAGGGCAAC GAGAGGCTGCAGATCGCCTTCGTCATGATGATCTTCCCCCTCGTCATGAACGGCCTGCAGTATTACATCATCGAC TCCTTCATCAAGAAGAAGGAGACGGAGCACGAGCACCTACCGTCCGAAGACCCGGACGAGGCTCGCCGGCGCTAC GACGACCGAGGCACGCACCTGCGAGGCCACGGCCCCGACGGCGAAAGCGACGGCGGCGACGGCGGCGACGACGGC CAGGACGAGCGTCGCACCAAGCCCGCCGGGCCCGCCAAGCCGGGCCACCGGACCCGCCGCAGCGCCGAGGGCGAG TACGACCCGGAAGTGGACGGCGACGCGCCCACCATCATCGGCAGCAGCTCCAGCCGCCGCATCCAGCGGGCCAAG GCCGGCGGCGGCGCCGACCCCTTCCCCAAGGACTAG |
| Transcript | >Hirsu2|1794 ATGCAGCCTCCGTCGCTCGCCGTCGCCGCCGTCAACGATGCCGTCGCCTCCTTGAGCTCCGGGGCGGCCTCGGCT GCAGCCTCGACGCCCGCATCCGCCGCCTTGGAGACGGCAGCGACGGCCGTGGCAACCGCTCTCGCCTCCGCCGCC GCCTCCGCCGCCGTCTCCGCCACCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCACCTCCGCATCCGACGGGAGC CCGACACATGAAGAGCCGCAGGGCGAGTGCCGCCTGCTCGGCTCGTTTGCCCTGCTCGTCCAGGCCGCTCTCGGC GCCCTCGCCCTGCTCTCCCTGGTCTACAAGCGCTGGCGGGAGAGGCCCCAGCGGCCCGTCAAGATCTGGTTCTTC GACGTCTCCAAGCAGGTCTTCGGCTCCGTCCTCGTCCACATTGCCAACATCTTCATGTCCATGTTGACCAGCGGC CGCTTCTCCATCGGCTTGGAGCCCGCCGTGACCCAGCGGCTGCTGGCGCGGGGCGAAGACGACGTCTACGTCCCC AACCCCTGCTCCTTCTATCTCCTCAACCTGGCCATCGATACCACCCTCGGCATCCCCATCCTCATCCTCCTGCTG CGCATCCTGACCGGGCTGGCGGCCATGACGACGTTCGGGAAGCCCTTCGAGTCCATCCAGTCCGGCCACTACGGC AACCCCCCCAATGCCTGGTGGTGGCTCAAGCAGTCCATCATCTACTTCGGCGGCCTCTTCGGCATGAAGCTCTGC GTCCTCATCATCTTCCTCCTCATGCCCTGGATCTCCAAGGTCGGCGACTGGGCCCTCGGGTGGACCGAGGGCAAC GAGAGGCTGCAGATCGCCTTCGTCATGATGATCTTCCCCCTCGTCATGAACGGCCTGCAGTATTACATCATCGAC TCCTTCATCAAGAAGAAGGAGACGGAGCACGAGCACCTACCGTCCGAAGACCCGGACGAGGCTCGCCGGCGCTAC GACGACCGAGGCACGCACCTGCGAGGCCACGGCCCCGACGGCGAAAGCGACGGCGGCGACGGCGGCGACGACGGC CAGGACGAGCGTCGCACCAAGCCCGCCGGGCCCGCCAAGCCGGGCCACCGGACCCGCCGCAGCGCCGAGGGCGAG TACGACCCGGAAGTGGACGGCGACGCGCCCACCATCATCGGCAGCAGCTCCAGCCGCCGCATCCAGCGGGCCAAG GCCGGCGGCGGCGCCGACCCCTTCCCCAAGGACTAG |
| Gene | >Hirsu2|1794 ATGCAGCCTCCGTCGCTCGCCGTCGCCGCCGTCAACGATGCCGTCGCCTCCTTGAGCTCCGGGGCGGCCTCGGCT GCAGCCTCGACGCCCGCATCCGCCGCCTTGGAGACGGCAGCGACGGCCGTGGCAACCGCTCTCGCCTCCGCCGCC GCCTCCGCCGCCGTCTCCGCCACCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCACCTCCGCATCCGACGGGAGC CCGACACATGAAGAGCCGCAGGGCGAGTGCCGCCTGCTCGGCTCGTTTGCCCTGCTCGTCCAGGCCGCTCTCGGC GCCCTCGCCCTGCTCTCCCTGGTCTACAAGCGCTGGCGGGAGAGGCCCCAGCGGCCCGTCAAGATCTGGTTCTTC GACGTCTCCAAGCAGGTCTTCGGCTCCGTCCTCGTCCACATTGCCAACATCTTCATGTCCATGTTGACCAGCGGC CGCTTCTCCATCGGCTTGGAGCCCGCCGTGACCCAGCGGCTGCTGGCGCGGGGCGAAGACGACGTCTACGTCCCC AACCCCTGCTCCTTCTATCTCCTCAACCTGGCCATCGATGTGAGTTGTCGGCCGAAGCCTCCCCGGCCGAGCCGT CCGTGTCGTCCCTCTAACGCCGCGTCAGACCACCCTCGGCATCCCCATCCTCATCCTCCTGCTGCGCATCCTGAC CGGGCTGGCGGCCATGACGACGTTCGGGAAGCCCTTCGAGTCCATCCAGTCCGGCCACTACGGCAACCCCCCCAA TGCCTGGTGGTGGCTCAAGCAGTCCATCATCTACTTCGGCGGCCTCTTCGGCATGAAGCTCTGCGTCCTCATCAT CTTCCTCCTCATGCCCTGGATCTCCAAGGTCGGCGACTGGGCCCTCGGGTGGACCGAGGGCAACGAGAGGCTGCA GATCGCCTTCGTCATGATGATCTTCCCCCTCGTCATGAACGGCCTGCAGTATTACATCATCGACTCCTTCATCAA GAAGAAGGAGACGGAGCACGAGCACCTACCGTCCGAAGACCCGGACGAGGCTCGCCGGCGCTACGACGACCGAGG CACGCACCTGCGAGGCCACGGCCCCGACGGCGAAAGCGACGGCGGCGACGGCGGCGACGACGGCCAGGACGAGCG TCGCACCAAGCCCGCCGGGCCCGCCAAGCCGGGCCACCGGACCCGCCGCAGCGCCGAGGGCGAGTACGACCCGGA AGTGGACGGCGACGCGCCCACCATCATCGGCAGCAGCTCCAGCCGCCGCATCCAGCGGGCCAAGGCCGGCGGCGG CGCCGACCCCTTCCCCAAGGACTAG |