Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1793
Gene name
LocationContig_1404:711..2206
Strand+
Gene length (bp)1495
Transcript length (bp)1440
Coding sequence length (bp)1440
Protein length (aa) 480

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 61 83 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1793
MSSVDVAMARSLRDGALQQVKRSLLTRAPDLASRDFLIDAADKVVDVKAAFSSWDNCMKANFCKWPVIAVIVVGS
LLLFSIVWCLVRRIFCGLACCCACFQCLKCCGNCCGCCDAPGKRKHKYLDEPYIPPHHGYQAHGPMNAAGALKPE
PPQYAEFDVSRKGGDDALPAMPSWESGSSKKVLVEDDEVEMSHLNKTSASSNPHSALPSTPSAAMGTDAFSPHGP
PSGSLAGYMPGHGQQAGGGAYGRLAAAHSQYSAGGRGYQDYGANQGPDGFPFDQPAAGYARAQTPRAHHPTQDYS
DLRSEPSQFGQYEPPGLTGSPAPGYGPRRQGTGDGAAMAGGRPPYGMDPRARGSPGPRQTPGPQGDYQYMPPRAS
PAPREQDYATPDYGHQGYGHQGYGPASEYDSRPYSPAHRPPPAAWPSQHQQPLGDSAPQSPITNNSGFDFTSGYA
RPPTSDRRSDPDRSPTHEPYPGYKAYQPA*
Coding >Hirsu2|1793
ATGTCCTCGGTCGACGTCGCCATGGCGCGCAGCCTGAGGGACGGCGCCCTGCAACAAGTCAAGCGCTCTCTCCTC
ACCCGCGCGCCAGACCTGGCCTCGCGAGACTTTCTCATCGATGCCGCCGACAAGGTCGTCGACGTCAAGGCCGCC
TTCTCCAGCTGGGACAATTGCATGAAGGCAAACTTCTGCAAATGGCCCGTCATCGCCGTCATCGTCGTCGGTAGC
CTCCTCCTCTTCAGCATCGTTTGGTGCCTCGTTCGCCGCATCTTCTGCGGCCTCGCCTGCTGCTGCGCCTGCTTC
CAGTGCCTCAAGTGCTGTGGGAACTGCTGCGGCTGCTGCGACGCCCCCGGGAAGCGCAAGCACAAGTACCTCGAC
GAGCCCTACATCCCCCCGCATCACGGCTACCAGGCCCACGGCCCCATGAACGCTGCCGGCGCTCTCAAGCCCGAG
CCGCCTCAGTACGCCGAGTTCGATGTGTCCAGGAAGGGCGGCGACGATGCCCTGCCCGCCATGCCCAGCTGGGAG
TCGGGCAGTTCCAAGAAGGTCCTGGTCGAGGACGACGAGGTGGAGATGAGCCACCTGAACAAGACGTCCGCCTCC
AGCAACCCCCACTCCGCCCTTCCTTCCACCCCGTCTGCCGCCATGGGCACCGACGCCTTCAGCCCCCACGGCCCT
CCCAGCGGCAGCCTCGCCGGATACATGCCCGGCCACGGTCAGCAGGCCGGAGGGGGCGCCTACGGACGGCTGGCT
GCCGCCCACTCGCAGTACAGTGCCGGCGGACGGGGATACCAAGACTACGGCGCCAACCAGGGTCCCGACGGCTTT
CCCTTCGACCAGCCGGCTGCCGGTTATGCGCGCGCCCAGACTCCCCGCGCGCACCACCCGACCCAGGACTACTCC
GACCTTCGGTCCGAGCCGAGCCAGTTCGGCCAGTACGAGCCACCGGGCCTGACGGGATCGCCCGCCCCCGGCTAT
GGCCCGAGGCGGCAGGGGACGGGAGACGGCGCCGCCATGGCGGGCGGTCGTCCCCCGTACGGCATGGACCCCCGC
GCAAGGGGCTCGCCCGGCCCCCGGCAGACGCCCGGCCCCCAGGGCGATTACCAGTACATGCCCCCGAGAGCCTCG
CCGGCCCCCCGCGAGCAAGACTACGCCACGCCCGACTACGGGCACCAGGGCTACGGGCACCAGGGCTACGGGCCC
GCGTCGGAATACGACAGCAGGCCATACTCGCCCGCCCACCGCCCGCCGCCCGCCGCCTGGCCGTCGCAGCACCAG
CAGCCGCTGGGCGACTCGGCCCCCCAGTCGCCCATCACCAACAACTCGGGCTTCGACTTCACCTCGGGCTATGCT
CGGCCGCCCACCAGCGACCGCCGCAGCGACCCCGACAGGTCGCCCACGCACGAGCCGTATCCGGGCTACAAGGCC
TACCAGCCGGCCTAG
Transcript >Hirsu2|1793
ATGTCCTCGGTCGACGTCGCCATGGCGCGCAGCCTGAGGGACGGCGCCCTGCAACAAGTCAAGCGCTCTCTCCTC
ACCCGCGCGCCAGACCTGGCCTCGCGAGACTTTCTCATCGATGCCGCCGACAAGGTCGTCGACGTCAAGGCCGCC
TTCTCCAGCTGGGACAATTGCATGAAGGCAAACTTCTGCAAATGGCCCGTCATCGCCGTCATCGTCGTCGGTAGC
CTCCTCCTCTTCAGCATCGTTTGGTGCCTCGTTCGCCGCATCTTCTGCGGCCTCGCCTGCTGCTGCGCCTGCTTC
CAGTGCCTCAAGTGCTGTGGGAACTGCTGCGGCTGCTGCGACGCCCCCGGGAAGCGCAAGCACAAGTACCTCGAC
GAGCCCTACATCCCCCCGCATCACGGCTACCAGGCCCACGGCCCCATGAACGCTGCCGGCGCTCTCAAGCCCGAG
CCGCCTCAGTACGCCGAGTTCGATGTGTCCAGGAAGGGCGGCGACGATGCCCTGCCCGCCATGCCCAGCTGGGAG
TCGGGCAGTTCCAAGAAGGTCCTGGTCGAGGACGACGAGGTGGAGATGAGCCACCTGAACAAGACGTCCGCCTCC
AGCAACCCCCACTCCGCCCTTCCTTCCACCCCGTCTGCCGCCATGGGCACCGACGCCTTCAGCCCCCACGGCCCT
CCCAGCGGCAGCCTCGCCGGATACATGCCCGGCCACGGTCAGCAGGCCGGAGGGGGCGCCTACGGACGGCTGGCT
GCCGCCCACTCGCAGTACAGTGCCGGCGGACGGGGATACCAAGACTACGGCGCCAACCAGGGTCCCGACGGCTTT
CCCTTCGACCAGCCGGCTGCCGGTTATGCGCGCGCCCAGACTCCCCGCGCGCACCACCCGACCCAGGACTACTCC
GACCTTCGGTCCGAGCCGAGCCAGTTCGGCCAGTACGAGCCACCGGGCCTGACGGGATCGCCCGCCCCCGGCTAT
GGCCCGAGGCGGCAGGGGACGGGAGACGGCGCCGCCATGGCGGGCGGTCGTCCCCCGTACGGCATGGACCCCCGC
GCAAGGGGCTCGCCCGGCCCCCGGCAGACGCCCGGCCCCCAGGGCGATTACCAGTACATGCCCCCGAGAGCCTCG
CCGGCCCCCCGCGAGCAAGACTACGCCACGCCCGACTACGGGCACCAGGGCTACGGGCACCAGGGCTACGGGCCC
GCGTCGGAATACGACAGCAGGCCATACTCGCCCGCCCACCGCCCGCCGCCCGCCGCCTGGCCGTCGCAGCACCAG
CAGCCGCTGGGCGACTCGGCCCCCCAGTCGCCCATCACCAACAACTCGGGCTTCGACTTCACCTCGGGCTATGCT
CGGCCGCCCACCAGCGACCGCCGCAGCGACCCCGACAGGTCGCCCACGCACGAGCCGTATCCGGGCTACAAGGCC
TACCAGCCGGCCTAG
Gene >Hirsu2|1793
ATGTCCTCGGTCGACGTCGCCATGGCGCGCAGCCTGAGGGACGGCGCCCTGCAACAAGTCAAGCGCTCTCTCCTC
ACCCGCGCGCCAGACCTGGCCTCGCGAGACTTTCTCATCGATGCCGCCGACAAGGTCGTCGACGTCAAGGCCGCC
TTCTCCAGCTGGGACAATTGCATGAAGGCAAACTTCTGCAAGTAGGCCGCCCGCCCTCCCTCTCCCCTCCTCGCC
GCAAGCTGACACCCCTTCCAGATGGCCCGTCATCGCCGTCATCGTCGTCGGTAGCCTCCTCCTCTTCAGCATCGT
TTGGTGCCTCGTTCGCCGCATCTTCTGCGGCCTCGCCTGCTGCTGCGCCTGCTTCCAGTGCCTCAAGTGCTGTGG
GAACTGCTGCGGCTGCTGCGACGCCCCCGGGAAGCGCAAGCACAAGTACCTCGACGAGCCCTACATCCCCCCGCA
TCACGGCTACCAGGCCCACGGCCCCATGAACGCTGCCGGCGCTCTCAAGCCCGAGCCGCCTCAGTACGCCGAGTT
CGATGTGTCCAGGAAGGGCGGCGACGATGCCCTGCCCGCCATGCCCAGCTGGGAGTCGGGCAGTTCCAAGAAGGT
CCTGGTCGAGGACGACGAGGTGGAGATGAGCCACCTGAACAAGACGTCCGCCTCCAGCAACCCCCACTCCGCCCT
TCCTTCCACCCCGTCTGCCGCCATGGGCACCGACGCCTTCAGCCCCCACGGCCCTCCCAGCGGCAGCCTCGCCGG
ATACATGCCCGGCCACGGTCAGCAGGCCGGAGGGGGCGCCTACGGACGGCTGGCTGCCGCCCACTCGCAGTACAG
TGCCGGCGGACGGGGATACCAAGACTACGGCGCCAACCAGGGTCCCGACGGCTTTCCCTTCGACCAGCCGGCTGC
CGGTTATGCGCGCGCCCAGACTCCCCGCGCGCACCACCCGACCCAGGACTACTCCGACCTTCGGTCCGAGCCGAG
CCAGTTCGGCCAGTACGAGCCACCGGGCCTGACGGGATCGCCCGCCCCCGGCTATGGCCCGAGGCGGCAGGGGAC
GGGAGACGGCGCCGCCATGGCGGGCGGTCGTCCCCCGTACGGCATGGACCCCCGCGCAAGGGGCTCGCCCGGCCC
CCGGCAGACGCCCGGCCCCCAGGGCGATTACCAGTACATGCCCCCGAGAGCCTCGCCGGCCCCCCGCGAGCAAGA
CTACGCCACGCCCGACTACGGGCACCAGGGCTACGGGCACCAGGGCTACGGGCCCGCGTCGGAATACGACAGCAG
GCCATACTCGCCCGCCCACCGCCCGCCGCCCGCCGCCTGGCCGTCGCAGCACCAGCAGCCGCTGGGCGACTCGGC
CCCCCAGTCGCCCATCACCAACAACTCGGGCTTCGACTTCACCTCGGGCTATGCTCGGCCGCCCACCAGCGACCG
CCGCAGCGACCCCGACAGGTCGCCCACGCACGAGCCGTATCCGGGCTACAAGGCCTACCAGCCGGCCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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