Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|175
Gene name
LocationContig_103:2273..3818
Strand-
Gene length (bp)1545
Transcript length (bp)1413
Coding sequence length (bp)1413
Protein length (aa) 471

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 161 183 22
2 193 211 18
3 344 366 22
4 370 392 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|175
MPERSLPEPSPALDPDEQEGIRALNRTPHPYHHHSAELQLRSARDGLGSESPAAHNGDALSSPTTRPAFAKESSP
ASDSGTDADDEHFLKGLPAPRVRLHKGLRGRNEFPSGISTPLASPAIPGDEQSHAAEKDLSERQNSLKRRLRDAE
RRRKVLVRRVAEISLVLALGGMVCLNPLAYPLVRAWNKDFQRLGLLLATLLALYPLRVAAWAHRHRRPSRMIPFK
IPSNVDPAPLLYPPTLTIFASLLVSPRNPMAVLPNVILSICSIPPFLIPQTGLATASNDPLHWALSVLPLNFRST
ATATLGLTDMGLSDETLVLLYPLHRTLCSVLQLLTTTSLLEAELQLLSIALIDLFILAVSPQVQVLKALLWVGGL
CTLVLCGPVIKWGIALARVPKWRFRRTRGSSKSHFWKDLRRMLSGRRTKHQMLASTTDDSLDDTDSSANDDDQLS
MIGSLSRARTLGPNHELRCP*
Coding >Hirsu2|175
ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC
CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG
AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC
GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT
AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT
GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG
CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA
AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTG
CTGGCTCTTTACCCTCTCCGCGTCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAG
ATACCCTCAAACGTCGACCCAGCTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCC
CCGCGCAACCCGATGGCGGTCCTCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAG
ACTGGACTCGCCACCGCCTCAAATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACC
GCCACCGCCACTCTCGGGCTGACTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGG
ACGCTATGCTCCGTTTTGCAACTCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCG
CTCATCGACCTTTTCATCCTGGCAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTG
TGCACCCTTGTGCTCTGCGGGCCGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGA
CGGACTCGTGGCTCCTCGAAATCTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCAT
CAGATGTTGGCCTCGACCACGGATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCC
ATGATTGGCAGCCTTTCAAGGGCTCGGACCCTGGGACCCAACCACGAATTGCGTTGCCCCTAG
Transcript >Hirsu2|175
ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC
CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG
AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC
GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT
AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT
GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG
CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA
AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTG
CTGGCTCTTTACCCTCTCCGCGTCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAG
ATACCCTCAAACGTCGACCCAGCTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCC
CCGCGCAACCCGATGGCGGTCCTCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAG
ACTGGACTCGCCACCGCCTCAAATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACC
GCCACCGCCACTCTCGGGCTGACTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGG
ACGCTATGCTCCGTTTTGCAACTCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCG
CTCATCGACCTTTTCATCCTGGCAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTG
TGCACCCTTGTGCTCTGCGGGCCGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGA
CGGACTCGTGGCTCCTCGAAATCTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCAT
CAGATGTTGGCCTCGACCACGGATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCC
ATGATTGGCAGCCTTTCAAGGGCTCGGACCCTGGGACCCAACCACGAATTGCGTTGCCCCTAG
Gene >Hirsu2|175
ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC
CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG
AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC
GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT
AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT
GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG
CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA
AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGGTACGCAGTGCTCATGTCCAAGACTCGCGGCACGC
CATCTCACACCATGGTAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTGCTGGCTCTTTACCCTCTCCGCG
TCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAGATACCCTCAAACGTCGACCCAG
CTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCCCCGCGCAACCCGATGGCGGTCC
TCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAGACTGGACTCGCCACCGCCTCAA
ATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACCGCCACCGCCACTCTCGGGCTGA
CTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGGACGCTATGCTCCGTTTTGCAAC
TCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCGCTCATCGACCTTTTCATCCTGG
CAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTGTGCACCCTTGTGCTCTGCGGGC
CGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGACGGACTCGTGGCTCCTCGAAAT
CTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCATCAGATGTTGGCCTCGACCACGG
ATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCCATGATTGGCAGCCTTTCAAGGG
CTCGGACCCTGGGACCCAACCACGAATTGCGTTGCGTGAGCCAGAATGTCTTGTCCTCGAAAGACGGCCAAGGCC
CTGACTCGACCGGCATCACACGAAGGCAAACCACATCAGCCCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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