Protein ID | Hirsu2|175 |
Gene name | |
Location | Contig_103:2273..3818 |
Strand | - |
Gene length (bp) | 1545 |
Transcript length (bp) | 1413 |
Coding sequence length (bp) | 1413 |
Protein length (aa) | 471 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 161 | 183 | 22 |
2 | 193 | 211 | 18 |
3 | 344 | 366 | 22 |
4 | 370 | 392 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|175 MPERSLPEPSPALDPDEQEGIRALNRTPHPYHHHSAELQLRSARDGLGSESPAAHNGDALSSPTTRPAFAKESSP ASDSGTDADDEHFLKGLPAPRVRLHKGLRGRNEFPSGISTPLASPAIPGDEQSHAAEKDLSERQNSLKRRLRDAE RRRKVLVRRVAEISLVLALGGMVCLNPLAYPLVRAWNKDFQRLGLLLATLLALYPLRVAAWAHRHRRPSRMIPFK IPSNVDPAPLLYPPTLTIFASLLVSPRNPMAVLPNVILSICSIPPFLIPQTGLATASNDPLHWALSVLPLNFRST ATATLGLTDMGLSDETLVLLYPLHRTLCSVLQLLTTTSLLEAELQLLSIALIDLFILAVSPQVQVLKALLWVGGL CTLVLCGPVIKWGIALARVPKWRFRRTRGSSKSHFWKDLRRMLSGRRTKHQMLASTTDDSLDDTDSSANDDDQLS MIGSLSRARTLGPNHELRCP* |
Coding | >Hirsu2|175 ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTG CTGGCTCTTTACCCTCTCCGCGTCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAG ATACCCTCAAACGTCGACCCAGCTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCC CCGCGCAACCCGATGGCGGTCCTCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAG ACTGGACTCGCCACCGCCTCAAATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACC GCCACCGCCACTCTCGGGCTGACTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGG ACGCTATGCTCCGTTTTGCAACTCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCG CTCATCGACCTTTTCATCCTGGCAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTG TGCACCCTTGTGCTCTGCGGGCCGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGA CGGACTCGTGGCTCCTCGAAATCTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCAT CAGATGTTGGCCTCGACCACGGATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCC ATGATTGGCAGCCTTTCAAGGGCTCGGACCCTGGGACCCAACCACGAATTGCGTTGCCCCTAG |
Transcript | >Hirsu2|175 ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTG CTGGCTCTTTACCCTCTCCGCGTCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAG ATACCCTCAAACGTCGACCCAGCTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCC CCGCGCAACCCGATGGCGGTCCTCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAG ACTGGACTCGCCACCGCCTCAAATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACC GCCACCGCCACTCTCGGGCTGACTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGG ACGCTATGCTCCGTTTTGCAACTCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCG CTCATCGACCTTTTCATCCTGGCAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTG TGCACCCTTGTGCTCTGCGGGCCGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGA CGGACTCGTGGCTCCTCGAAATCTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCAT CAGATGTTGGCCTCGACCACGGATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCC ATGATTGGCAGCCTTTCAAGGGCTCGGACCCTGGGACCCAACCACGAATTGCGTTGCCCCTAG |
Gene | >Hirsu2|175 ATGCCAGAGCGCAGCTTGCCCGAGCCCTCGCCGGCTCTTGACCCCGACGAGCAAGAGGGCATCCGCGCGCTGAAC CGGACGCCCCATCCGTACCACCATCACAGCGCAGAATTGCAGCTCCGCTCGGCGCGCGACGGCCTCGGCAGCGAG AGCCCAGCAGCCCATAACGGCGACGCCCTTTCATCCCCGACCACGCGCCCGGCCTTCGCCAAGGAGTCGTCTCCC GCCAGTGATAGCGGCACCGACGCCGACGACGAGCATTTCCTCAAGGGACTCCCCGCGCCCAGGGTCAGGCTGCAT AAGGGATTACGCGGCCGCAATGAGTTTCCGTCGGGAATATCCACCCCTCTGGCCTCCCCCGCCATTCCCGGGGAT GAGCAGTCGCACGCTGCCGAGAAGGATCTGTCGGAAAGGCAGAACTCGCTCAAGCGCCGTCTCAGGGACGCCGAG CGCCGTAGAAAGGTCCTGGTGCGCCGTGTGGCCGAAATCTCTCTGGTCCTTGCCCTTGGGGGCATGGTATGCCTA AACCCTCTCGCCTACCCCTTGGTGCGAGCCTGGAACAAAGGTACGCAGTGCTCATGTCCAAGACTCGCGGCACGC CATCTCACACCATGGTAGACTTTCAACGGCTGGGCCTGCTGCTCGCGACCTTGCTGGCTCTTTACCCTCTCCGCG TCGCCGCGTGGGCGCATCGGCATCGTCGGCCGTCGCGCATGATCCCCTTCAAGATACCCTCAAACGTCGACCCAG CTCCGTTGCTGTATCCGCCGACCCTGACCATCTTTGCATCCCTCCTCGTTTCCCCGCGCAACCCGATGGCGGTCC TCCCCAACGTAATCCTGAGCATATGCTCTATTCCCCCGTTCTTGATACCTCAGACTGGACTCGCCACCGCCTCAA ATGACCCACTGCATTGGGCACTCTCCGTCTTGCCTTTGAATTTCAGGTCAACCGCCACCGCCACTCTCGGGCTGA CTGACATGGGCTTGTCGGACGAAACGCTCGTCTTGCTCTACCCCCTGCACCGGACGCTATGCTCCGTTTTGCAAC TCCTCACGACCACCAGTCTCCTCGAGGCCGAGCTCCAGCTGCTGTCCATCGCGCTCATCGACCTTTTCATCCTGG CAGTCTCGCCTCAGGTCCAAGTGTTGAAGGCCCTACTTTGGGTTGGGGGACTGTGCACCCTTGTGCTCTGCGGGC CGGTCATCAAATGGGGCATTGCGCTGGCGCGAGTACCCAAATGGCGCTTCCGACGGACTCGTGGCTCCTCGAAAT CTCACTTCTGGAAGGACCTGCGCCGAATGTTGTCGGGGCGCAGAACAAAGCATCAGATGTTGGCCTCGACCACGG ATGACAGCCTCGACGATACCGACTCCTCTGCCAATGACGACGACCAGCTGTCCATGATTGGCAGCCTTTCAAGGG CTCGGACCCTGGGACCCAACCACGAATTGCGTTGCGTGAGCCAGAATGTCTTGTCCTCGAAAGACGGCCAAGGCC CTGACTCGACCGGCATCACACGAAGGCAAACCACATCAGCCCTAG |