© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|174 |
| Gene name | |
| Location | Contig_103:1101..2160 |
| Strand | - |
| Gene length (bp) | 1059 |
| Transcript length (bp) | 1059 |
| Coding sequence length (bp) | 1059 |
| Protein length (aa) | 353 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7T6|SEC59_SCHPO | Dolichol kinase sec59 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec59 PE=3 SV=3 | 122 | 350 | 4.0E-37 |
| sp|F4J4C8|EVN_ARATH | Dolichol kinase EVAN OS=Arabidopsis thaliana GN=EVN PE=2 SV=1 | 93 | 279 | 1.0E-26 |
| sp|P20048|SEC59_YEAST | Dolichol kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC59 PE=1 SV=1 | 95 | 348 | 1.0E-22 |
| sp|Q58CR4|DOLK_BOVIN | Dolichol kinase OS=Bos taurus GN=DOLK PE=2 SV=1 | 93 | 279 | 2.0E-22 |
| sp|Q9UPQ8|DOLK_HUMAN | Dolichol kinase OS=Homo sapiens GN=DOLK PE=1 SV=1 | 96 | 288 | 2.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7T6|SEC59_SCHPO | Dolichol kinase sec59 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec59 PE=3 SV=3 | 122 | 350 | 4.0E-37 |
| sp|F4J4C8|EVN_ARATH | Dolichol kinase EVAN OS=Arabidopsis thaliana GN=EVN PE=2 SV=1 | 93 | 279 | 1.0E-26 |
| sp|P20048|SEC59_YEAST | Dolichol kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC59 PE=1 SV=1 | 95 | 348 | 1.0E-22 |
| sp|Q58CR4|DOLK_BOVIN | Dolichol kinase OS=Bos taurus GN=DOLK PE=2 SV=1 | 93 | 279 | 2.0E-22 |
| sp|Q9UPQ8|DOLK_HUMAN | Dolichol kinase OS=Homo sapiens GN=DOLK PE=1 SV=1 | 96 | 288 | 2.0E-21 |
| sp|Q8R2Y3|DOLK_MOUSE | Dolichol kinase OS=Mus musculus GN=Dolk PE=1 SV=1 | 96 | 288 | 6.0E-21 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.111 | 0.124 | 0.0433 | 0.1591 | 0.174 | 0.0126 | 0.7626 | 0.5222 | 0.4642 | 0.0685 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 98 | 120 | 22 |
| 3 | 132 | 166 | 34 |
| 4 | 198 | 220 | 22 |
| 5 | 241 | 258 | 17 |
| 6 | 273 | 295 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 393 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|174 MKKWLYAAYIYACLLAIILVGVRLHVQDHALSGNEPIGWGLGYVLGDWPWFRFQVVQANLERWICLPRLADSESP GERQCHMGWVQQVRHDDLGEANTRLALGGYWLVILVVGLLIVFRLKETYEVDTRRKVFHFMMVGMFLPGTFVDPA FAALALSLVLAVFLILDLLRASQLPPLSKPLAAFLAPYVDGRDFRGPVVISHIFLLIGCAIPLWLALATLPRAGS GQLAGWEVPTRDVSMVAGVVCVGLGDAAASLIGRRYGHHKWFWGGGKSLEGSVAFAVAVFAGLSAARAWVRVGGW PTTDDATGWLASARNAGICASMASLTEAVLTGGNDNVIVPVVLWTCVKSLGV* |
| Coding | >Hirsu2|174 ATGAAAAAGTGGCTCTACGCCGCCTACATCTACGCGTGCCTGCTGGCAATCATTCTCGTTGGCGTCCGATTGCAC GTGCAGGATCATGCCCTCAGCGGCAACGAGCCCATCGGATGGGGGCTGGGCTATGTCTTGGGTGACTGGCCGTGG TTTCGATTTCAGGTGGTCCAGGCCAATCTCGAACGATGGATCTGCTTGCCTCGACTTGCAGACTCGGAAAGTCCG GGCGAACGGCAATGCCACATGGGCTGGGTGCAGCAGGTTCGCCACGACGACTTGGGGGAAGCAAATACGAGGCTC GCTCTCGGCGGATACTGGCTCGTGATTCTCGTCGTCGGCTTGCTCATCGTGTTCCGGCTCAAGGAAACGTACGAA GTCGACACTCGGCGCAAGGTTTTCCACTTCATGATGGTCGGCATGTTCCTCCCCGGAACCTTTGTCGATCCCGCC TTCGCCGCCCTGGCTCTGTCGTTGGTTCTGGCCGTCTTCCTCATCCTGGACCTCCTGAGAGCGAGCCAGCTGCCG CCCCTGTCGAAACCCCTCGCGGCCTTCTTGGCGCCCTACGTCGACGGGAGAGACTTCCGGGGCCCAGTCGTCATA TCCCACATATTCCTACTCATCGGATGCGCCATACCTCTGTGGCTGGCCCTGGCGACGCTGCCGCGAGCAGGGTCG GGACAGCTGGCCGGCTGGGAGGTTCCCACGAGAGACGTGAGCATGGTGGCGGGCGTCGTCTGCGTTGGCCTCGGC GATGCGGCTGCCTCGCTCATCGGGCGACGCTACGGACACCACAAGTGGTTCTGGGGGGGCGGCAAGAGCCTCGAA GGGAGCGTCGCGTTCGCCGTCGCCGTCTTCGCCGGCCTGTCCGCGGCGCGCGCATGGGTGCGGGTTGGCGGCTGG CCGACCACCGACGATGCGACGGGCTGGCTCGCCAGCGCCCGCAATGCCGGCATCTGCGCGTCGATGGCGAGCCTG ACGGAGGCGGTCTTGACGGGGGGTAACGACAACGTCATCGTCCCCGTCGTCCTGTGGACCTGCGTCAAGAGTCTG GGGGTGTAG |
| Transcript | >Hirsu2|174 ATGAAAAAGTGGCTCTACGCCGCCTACATCTACGCGTGCCTGCTGGCAATCATTCTCGTTGGCGTCCGATTGCAC GTGCAGGATCATGCCCTCAGCGGCAACGAGCCCATCGGATGGGGGCTGGGCTATGTCTTGGGTGACTGGCCGTGG TTTCGATTTCAGGTGGTCCAGGCCAATCTCGAACGATGGATCTGCTTGCCTCGACTTGCAGACTCGGAAAGTCCG GGCGAACGGCAATGCCACATGGGCTGGGTGCAGCAGGTTCGCCACGACGACTTGGGGGAAGCAAATACGAGGCTC GCTCTCGGCGGATACTGGCTCGTGATTCTCGTCGTCGGCTTGCTCATCGTGTTCCGGCTCAAGGAAACGTACGAA GTCGACACTCGGCGCAAGGTTTTCCACTTCATGATGGTCGGCATGTTCCTCCCCGGAACCTTTGTCGATCCCGCC TTCGCCGCCCTGGCTCTGTCGTTGGTTCTGGCCGTCTTCCTCATCCTGGACCTCCTGAGAGCGAGCCAGCTGCCG CCCCTGTCGAAACCCCTCGCGGCCTTCTTGGCGCCCTACGTCGACGGGAGAGACTTCCGGGGCCCAGTCGTCATA TCCCACATATTCCTACTCATCGGATGCGCCATACCTCTGTGGCTGGCCCTGGCGACGCTGCCGCGAGCAGGGTCG GGACAGCTGGCCGGCTGGGAGGTTCCCACGAGAGACGTGAGCATGGTGGCGGGCGTCGTCTGCGTTGGCCTCGGC GATGCGGCTGCCTCGCTCATCGGGCGACGCTACGGACACCACAAGTGGTTCTGGGGGGGCGGCAAGAGCCTCGAA GGGAGCGTCGCGTTCGCCGTCGCCGTCTTCGCCGGCCTGTCCGCGGCGCGCGCATGGGTGCGGGTTGGCGGCTGG CCGACCACCGACGATGCGACGGGCTGGCTCGCCAGCGCCCGCAATGCCGGCATCTGCGCGTCGATGGCGAGCCTG ACGGAGGCGGTCTTGACGGGGGGTAACGACAACGTCATCGTCCCCGTCGTCCTGTGGACCTGCGTCAAGAGTCTG GGGGTGTAG |
| Gene | >Hirsu2|174 ATGAAAAAGTGGCTCTACGCCGCCTACATCTACGCGTGCCTGCTGGCAATCATTCTCGTTGGCGTCCGATTGCAC GTGCAGGATCATGCCCTCAGCGGCAACGAGCCCATCGGATGGGGGCTGGGCTATGTCTTGGGTGACTGGCCGTGG TTTCGATTTCAGGTGGTCCAGGCCAATCTCGAACGATGGATCTGCTTGCCTCGACTTGCAGACTCGGAAAGTCCG GGCGAACGGCAATGCCACATGGGCTGGGTGCAGCAGGTTCGCCACGACGACTTGGGGGAAGCAAATACGAGGCTC GCTCTCGGCGGATACTGGCTCGTGATTCTCGTCGTCGGCTTGCTCATCGTGTTCCGGCTCAAGGAAACGTACGAA GTCGACACTCGGCGCAAGGTTTTCCACTTCATGATGGTCGGCATGTTCCTCCCCGGAACCTTTGTCGATCCCGCC TTCGCCGCCCTGGCTCTGTCGTTGGTTCTGGCCGTCTTCCTCATCCTGGACCTCCTGAGAGCGAGCCAGCTGCCG CCCCTGTCGAAACCCCTCGCGGCCTTCTTGGCGCCCTACGTCGACGGGAGAGACTTCCGGGGCCCAGTCGTCATA TCCCACATATTCCTACTCATCGGATGCGCCATACCTCTGTGGCTGGCCCTGGCGACGCTGCCGCGAGCAGGGTCG GGACAGCTGGCCGGCTGGGAGGTTCCCACGAGAGACGTGAGCATGGTGGCGGGCGTCGTCTGCGTTGGCCTCGGC GATGCGGCTGCCTCGCTCATCGGGCGACGCTACGGACACCACAAGTGGTTCTGGGGGGGCGGCAAGAGCCTCGAA GGGAGCGTCGCGTTCGCCGTCGCCGTCTTCGCCGGCCTGTCCGCGGCGCGCGCATGGGTGCGGGTTGGCGGCTGG CCGACCACCGACGATGCGACGGGCTGGCTCGCCAGCGCCCGCAATGCCGGCATCTGCGCGTCGATGGCGAGCCTG ACGGAGGCGGTCTTGACGGGGGGTAACGACAACGTCATCGTCCCCGTCGTCCTGTGGACCTGCGTCAAGAGTCTG GGGGTGTAG |