Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1739
Gene name
LocationContig_1395:1359..3004
Strand-
Gene length (bp)1645
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 1.3E-10 35 105

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38739|WSC4_YEAST Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1 14 115 4.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide 0.107 0.1018 0.4194 0.6602 0.0981 0.0103 0.0696 0.3715 0.1874 0.0476

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.999711

Transmembrane Domains

Domain # Start End Length
1 213 235 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1794
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1241
Ophiocordyceps australis map64 (Brazil) OphauB2|603
Ophiocordyceps camponoti-floridani Ophcf2|06352
Ophiocordyceps camponoti-rufipedis Ophun1|656
Ophiocordyceps kimflemingae Ophio5|1683
Ophiocordyceps subramaniannii Hirsu2|1739 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1739
MGSRRPLARPGRSWPLLLSACLATVCALDPSICASFNTASSGQNTSIYQTNGLCHDFCLKKNSAYAITQGNSCWC
SDYTPAKGKQVDMSECNKPCPAYPDEKCGGQGVFGYIALGGALPSGTKGDPEPEPTPSPTSKQHKTEETHVSSAS
KSSIEAPTVSEPPAPATSIIQTIVAGGTVQTVTVIPTQSTVSAGVKDSTDVTPGRSGLGTGGVAGIVAAIAVVLA
AAAMALFFYFQRKKRTEEDFRDDPSARGSSSGMLGRPEMSGIPGSPGSTGNRSSMLQIDPRMDPFKQGLYARSGS
HESINTLGDEHDYSRRIQPPKVLRATNPDPTED*
Coding >Hirsu2|1739
ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC
TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC
AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC
TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC
GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC
CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC
AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC
GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC
GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC
GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC
GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC
AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC
CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC
ACCAACCCCGACCCGACCGAGGACTGA
Transcript >Hirsu2|1739
ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC
TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC
AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC
TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC
GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC
CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC
AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC
GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC
GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC
GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC
GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC
AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC
CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC
ACCAACCCCGACCCGACCGAGGACTGA
Gene >Hirsu2|1739
ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC
TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAGTCCGTCGCCGTCCGCGCCC
TCTCCTCCGCGCCCTGAGCCCTGCTGACTGCGTCCCGGCCCAGACACGAGCATCTACCAGACCAATGGCCTGTGT
CACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGCTCCGACTACACC
CCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGACGAGAAGTGCGGA
GGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGACCCGGAGCCCGAA
CCGACTCCGTCGCCGACGTCAAAGGTGAGTTTCTCTGCTATGCTCTTTCCATCGCCAGCCCTCGCATCCTCGCCC
TCGCGAATTCTCCATCCGCTGCTGCGCCCACGGTCCTCGAGCTGCGCTCGGACCGACCTTGCTTGGCTTTTGCTC
GTTTTCTTCTCCCACGCTCCCTTGAGCCCCGCCGCCCCGTCCACCCGACCGACCTGCTGCCCCCGGGCGGCGGCG
TTTCTACGCCCCTCGGCCCGGCACACTCCCGTGCTGTCGCCGCTCCGGTGCCGGCTCCTTTGTCACTTTTCTGTC
GATCGGCTATTTGTGGTGAGACGGCAGGGCTTATGTGTCTGATCCCCCCAGGACGAGACTCCCACGGCGACGGCG
ACGGTGACCAAAACTGTGCAGGACACAGTAACTCCTCAGCCGCCGCCGCCCCCTCCATCAGCTAGCTCCAGTAGT
GGCCCGCCTGTACGACCTGTTTTCCCTTGTCTGTTCTGCGTGTGCCTGTTTTCTCGTCTCGCTCGCGATGCTCGA
GGTTGATTTTGTGCTTGGCGCTCCCGGCCGGGACGACAGAGAGGGAGATGGGAGATGAATGCTAACGTCGACTCG
TCAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGCAAGAGCAGCATTGAGGCGCCCACCGTCAGCGA
GCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCCGGCGGCACCGTCCAGACAGTCACCGTCATCCC
GACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGACGTCACGCCCGGCAGGAGCGGGCTCGGCACCGG
AGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCCGCCGCCGCCATGGCCCTGTTCTTCTACTTCCA
GCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGCGCCCGCGGAAGCTCGTCGGGCATGCTGGGCCG
GCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGCAACCGCAGCAGCATGCTCCAGATCGACCCGCG
CATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGCCACGAGAGCATCAACACGCTCGGCGACGAGCA
CGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCCACCAACCCCGACCCGACCGAGGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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