© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1739 |
| Gene name | |
| Location | Contig_1395:1359..3004 |
| Strand | - |
| Gene length (bp) | 1645 |
| Transcript length (bp) | 1002 |
| Coding sequence length (bp) | 1002 |
| Protein length (aa) | 334 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01822 | WSC | WSC domain | 1.3E-10 | 35 | 105 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38739|WSC4_YEAST | Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1 | 14 | 115 | 4.0E-11 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 213 | 235 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1739 MGSRRPLARPGRSWPLLLSACLATVCALDPSICASFNTASSGQNTSIYQTNGLCHDFCLKKNSAYAITQGNSCWC SDYTPAKGKQVDMSECNKPCPAYPDEKCGGQGVFGYIALGGALPSGTKGDPEPEPTPSPTSKQHKTEETHVSSAS KSSIEAPTVSEPPAPATSIIQTIVAGGTVQTVTVIPTQSTVSAGVKDSTDVTPGRSGLGTGGVAGIVAAIAVVLA AAAMALFFYFQRKKRTEEDFRDDPSARGSSSGMLGRPEMSGIPGSPGSTGNRSSMLQIDPRMDPFKQGLYARSGS HESINTLGDEHDYSRRIQPPKVLRATNPDPTED* |
| Coding | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC ACCAACCCCGACCCGACCGAGGACTGA |
| Transcript | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC ACCAACCCCGACCCGACCGAGGACTGA |
| Gene | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAGTCCGTCGCCGTCCGCGCCC TCTCCTCCGCGCCCTGAGCCCTGCTGACTGCGTCCCGGCCCAGACACGAGCATCTACCAGACCAATGGCCTGTGT CACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGCTCCGACTACACC CCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGACGAGAAGTGCGGA GGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGACCCGGAGCCCGAA CCGACTCCGTCGCCGACGTCAAAGGTGAGTTTCTCTGCTATGCTCTTTCCATCGCCAGCCCTCGCATCCTCGCCC TCGCGAATTCTCCATCCGCTGCTGCGCCCACGGTCCTCGAGCTGCGCTCGGACCGACCTTGCTTGGCTTTTGCTC GTTTTCTTCTCCCACGCTCCCTTGAGCCCCGCCGCCCCGTCCACCCGACCGACCTGCTGCCCCCGGGCGGCGGCG TTTCTACGCCCCTCGGCCCGGCACACTCCCGTGCTGTCGCCGCTCCGGTGCCGGCTCCTTTGTCACTTTTCTGTC GATCGGCTATTTGTGGTGAGACGGCAGGGCTTATGTGTCTGATCCCCCCAGGACGAGACTCCCACGGCGACGGCG ACGGTGACCAAAACTGTGCAGGACACAGTAACTCCTCAGCCGCCGCCGCCCCCTCCATCAGCTAGCTCCAGTAGT GGCCCGCCTGTACGACCTGTTTTCCCTTGTCTGTTCTGCGTGTGCCTGTTTTCTCGTCTCGCTCGCGATGCTCGA GGTTGATTTTGTGCTTGGCGCTCCCGGCCGGGACGACAGAGAGGGAGATGGGAGATGAATGCTAACGTCGACTCG TCAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGCAAGAGCAGCATTGAGGCGCCCACCGTCAGCGA GCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCCGGCGGCACCGTCCAGACAGTCACCGTCATCCC GACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGACGTCACGCCCGGCAGGAGCGGGCTCGGCACCGG AGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCCGCCGCCGCCATGGCCCTGTTCTTCTACTTCCA GCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGCGCCCGCGGAAGCTCGTCGGGCATGCTGGGCCG GCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGCAACCGCAGCAGCATGCTCCAGATCGACCCGCG CATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGCCACGAGAGCATCAACACGCTCGGCGACGAGCA CGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCCACCAACCCCGACCCGACCGAGGACTGA |