Protein ID | Hirsu2|1739 |
Gene name | |
Location | Contig_1395:1359..3004 |
Strand | - |
Gene length (bp) | 1645 |
Transcript length (bp) | 1002 |
Coding sequence length (bp) | 1002 |
Protein length (aa) | 334 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01822 | WSC | WSC domain | 1.3E-10 | 35 | 105 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P38739|WSC4_YEAST | Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1 | 14 | 115 | 4.0E-11 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide | 0.107 | 0.1018 | 0.4194 | 0.6602 | 0.0981 | 0.0103 | 0.0696 | 0.3715 | 0.1874 | 0.0476 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999711 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 213 | 235 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 1794 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1739 MGSRRPLARPGRSWPLLLSACLATVCALDPSICASFNTASSGQNTSIYQTNGLCHDFCLKKNSAYAITQGNSCWC SDYTPAKGKQVDMSECNKPCPAYPDEKCGGQGVFGYIALGGALPSGTKGDPEPEPTPSPTSKQHKTEETHVSSAS KSSIEAPTVSEPPAPATSIIQTIVAGGTVQTVTVIPTQSTVSAGVKDSTDVTPGRSGLGTGGVAGIVAAIAVVLA AAAMALFFYFQRKKRTEEDFRDDPSARGSSSGMLGRPEMSGIPGSPGSTGNRSSMLQIDPRMDPFKQGLYARSGS HESINTLGDEHDYSRRIQPPKVLRATNPDPTED* |
Coding | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC ACCAACCCCGACCCGACCGAGGACTGA |
Transcript | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAACACGAGCATCTACCAGACC AATGGCCTGTGTCACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGC TCCGACTACACCCCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGAC GAGAAGTGCGGAGGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGAC CCGGAGCCCGAACCGACTCCGTCGCCGACGTCAAAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGC AAGAGCAGCATTGAGGCGCCCACCGTCAGCGAGCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCC GGCGGCACCGTCCAGACAGTCACCGTCATCCCGACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGAC GTCACGCCCGGCAGGAGCGGGCTCGGCACCGGAGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCC GCCGCCGCCATGGCCCTGTTCTTCTACTTCCAGCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGC GCCCGCGGAAGCTCGTCGGGCATGCTGGGCCGGCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGC AACCGCAGCAGCATGCTCCAGATCGACCCGCGCATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGC CACGAGAGCATCAACACGCTCGGCGACGAGCACGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCC ACCAACCCCGACCCGACCGAGGACTGA |
Gene | >Hirsu2|1739 ATGGGCTCGCGTCGGCCGCTCGCTCGCCCCGGCCGCAGCTGGCCGCTGCTGCTGTCGGCCTGCCTGGCCACCGTC TGCGCCCTCGACCCCAGCATCTGCGCCAGCTTCAACACGGCCTCGTCCGGTCAAAGTCCGTCGCCGTCCGCGCCC TCTCCTCCGCGCCCTGAGCCCTGCTGACTGCGTCCCGGCCCAGACACGAGCATCTACCAGACCAATGGCCTGTGT CACGACTTTTGCCTCAAGAAGAACTCGGCCTATGCCATCACCCAGGGCAACTCGTGCTGGTGCTCCGACTACACC CCCGCCAAGGGCAAGCAGGTCGACATGTCCGAGTGCAACAAGCCGTGCCCGGCCTATCCCGACGAGAAGTGCGGA GGCCAAGGCGTCTTCGGATACATCGCCCTCGGCGGCGCCCTGCCGTCCGGCACAAAGGGCGACCCGGAGCCCGAA CCGACTCCGTCGCCGACGTCAAAGGTGAGTTTCTCTGCTATGCTCTTTCCATCGCCAGCCCTCGCATCCTCGCCC TCGCGAATTCTCCATCCGCTGCTGCGCCCACGGTCCTCGAGCTGCGCTCGGACCGACCTTGCTTGGCTTTTGCTC GTTTTCTTCTCCCACGCTCCCTTGAGCCCCGCCGCCCCGTCCACCCGACCGACCTGCTGCCCCCGGGCGGCGGCG TTTCTACGCCCCTCGGCCCGGCACACTCCCGTGCTGTCGCCGCTCCGGTGCCGGCTCCTTTGTCACTTTTCTGTC GATCGGCTATTTGTGGTGAGACGGCAGGGCTTATGTGTCTGATCCCCCCAGGACGAGACTCCCACGGCGACGGCG ACGGTGACCAAAACTGTGCAGGACACAGTAACTCCTCAGCCGCCGCCGCCCCCTCCATCAGCTAGCTCCAGTAGT GGCCCGCCTGTACGACCTGTTTTCCCTTGTCTGTTCTGCGTGTGCCTGTTTTCTCGTCTCGCTCGCGATGCTCGA GGTTGATTTTGTGCTTGGCGCTCCCGGCCGGGACGACAGAGAGGGAGATGGGAGATGAATGCTAACGTCGACTCG TCAGCAGCACAAGACGGAAGAGACGCACGTCAGCAGCGCCAGCAAGAGCAGCATTGAGGCGCCCACCGTCAGCGA GCCCCCCGCGCCCGCGACATCCATCATCCAGACCATCGTCGCCGGCGGCACCGTCCAGACAGTCACCGTCATCCC GACGCAGTCGACCGTCTCGGCCGGCGTCAAGGACTCGACCGACGTCACGCCCGGCAGGAGCGGGCTCGGCACCGG AGGCGTCGCGGGCATCGTGGCCGCCATCGCCGTCGTCTTGGCCGCCGCCGCCATGGCCCTGTTCTTCTACTTCCA GCGCAAGAAGCGGACGGAGGAAGACTTCCGCGACGACCCCAGCGCCCGCGGAAGCTCGTCGGGCATGCTGGGCCG GCCCGAGATGTCGGGCATCCCCGGCTCGCCCGGCTCGACGGGCAACCGCAGCAGCATGCTCCAGATCGACCCGCG CATGGACCCGTTCAAGCAGGGGCTGTACGCCCGCAGCGGCAGCCACGAGAGCATCAACACGCTCGGCGACGAGCA CGACTACTCGAGACGCATCCAGCCGCCCAAGGTGCTGCGGGCCACCAACCCCGACCCGACCGAGGACTGA |