Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1733
Gene name
LocationContig_1393:1170..3474
Strand-
Gene length (bp)2304
Transcript length (bp)2010
Coding sequence length (bp)2010
Protein length (aa) 670

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 4.4E-07 44 77

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 35 523 3.0E-23
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 36 516 2.0E-16

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0005634 nucleus Yes
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:0010468 regulation of gene expression No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0005488 binding No
GO:0046872 metal ion binding No
GO:0043229 intracellular organelle No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0043226 organelle No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0060255 regulation of macromolecule metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No
GO:2001141 regulation of RNA biosynthetic process No
GO:0043167 ion binding No
GO:0044424 intracellular part No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0050789 regulation of biological process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0044464 cell part No
GO:0031323 regulation of cellular metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0003700 DNA-binding transcription factor activity No
GO:0046914 transition metal ion binding No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1733
MPRRPGFRNLVAAQAQADDAARCPARPGTSWSLVRRRRPISKIACDSCRARKVACDGTQPTCHQCRDRRLRCVYR
APDAKTVLQRLLAERERDFGALLDRLCSLSNDEAVDVPRRLRPASDLATALSCLGAGPDPRPPPAHVLEPPALWP
RVELELTALHHAVYPLLAPLAAPAVDPADSPPGPDAAAYCDPRLRALDIAYWTAVPISDAAAAAALSLYLTRDHP
ALPLFDADLFLADLVDRRSTCCSALLVSSVLHLACEADSASRPDAWPLALSFFAEAEGLWRAEQARDSLLNVAAA
HCLAIGCILAGRDALGRDLMAAGRRMAQRLRLLDVCADEADVDTLLGKPPDWVRFASHVAWGTYCLATLAAFNYY
DEPVAFPPALPIPGDVGEPSADPWPPRPLPAYMGRTATEACRFFVICQEIASVCLGHGAAAPASLSFAEAKFRRL
LAWAGGLPREALAGDRPQPHAILLHMWLHCVVLHLFRPFLADAGTRQPLRSFSSPDACPQTVSAASLRQLKHLTL
IYCQAQPRSRRSPYAGPSLMQAMLCMLGGQPPDPDRRPYLLHVTRCWEELYAGYPLYGEIAQATWAVALRRGVVT
GAEARRRMDEFRRPGRQHAAAPTSSLVADFDLAAHDVDAARIAAVANEFSDLVMFDELTINDDFKAQRP*
Coding >Hirsu2|1733
ATGCCTCGCCGCCCCGGCTTCAGGAACCTCGTGGCGGCCCAGGCCCAGGCCGACGACGCCGCCCGCTGCCCTGCC
CGGCCCGGCACGTCCTGGAGCCTCGTCAGGCGCCGCCGGCCAATCAGCAAGATCGCCTGCGACTCGTGTCGCGCG
AGAAAGGTGGCCTGCGACGGTACACAACCGACCTGTCACCAGTGCCGTGACAGGAGGCTCAGGTGCGTCTACCGC
GCCCCGGACGCCAAGACGGTCCTCCAGCGCCTGCTGGCCGAGCGCGAGAGGGACTTCGGCGCCCTCCTCGACCGC
CTGTGCTCCCTGTCCAACGACGAGGCCGTCGACGTCCCCCGCCGCCTGCGCCCCGCCTCCGACCTGGCCACGGCC
CTGTCCTGCCTCGGCGCCGGCCCCGACCCGAGGCCGCCGCCCGCGCACGTCCTCGAGCCCCCGGCCCTGTGGCCC
CGGGTCGAGCTGGAGCTGACGGCCCTCCACCATGCCGTCTACCCCCTGCTCGCCCCGCTCGCCGCCCCGGCCGTC
GACCCGGCCGACTCGCCGCCCGGCCCGGACGCCGCCGCCTACTGCGACCCGCGCCTGCGCGCCCTCGACATCGCC
TACTGGACCGCCGTCCCCATCTCCGACGCCGCCGCCGCCGCCGCCCTGTCCCTGTACCTGACCCGCGACCACCCG
GCCCTGCCGCTCTTCGACGCCGACCTGTTCCTGGCCGACCTCGTCGACCGCAGATCGACCTGCTGCTCCGCCCTC
CTCGTGAGCTCCGTGCTTCACCTCGCCTGCGAGGCCGACTCCGCTTCCCGCCCGGACGCCTGGCCCCTCGCCCTC
TCCTTCTTTGCCGAGGCCGAGGGGCTCTGGAGGGCGGAGCAGGCGCGCGACTCGCTGCTGAACGTGGCCGCCGCC
CACTGCCTGGCCATTGGCTGCATCCTCGCCGGCCGCGATGCCCTCGGCCGCGACCTGATGGCCGCCGGCCGCCGC
ATGGCTCAGCGCCTGCGCCTGCTCGACGTCTGTGCCGACGAGGCCGACGTCGATACCCTGCTGGGGAAGCCCCCT
GACTGGGTCAGGTTCGCTTCGCACGTCGCCTGGGGCACCTACTGCCTTGCCACACTGGCCGCCTTCAACTACTAC
GACGAGCCGGTGGCCTTCCCTCCCGCGCTGCCGATCCCCGGCGACGTCGGCGAGCCCTCGGCCGACCCGTGGCCG
CCGCGGCCTCTCCCGGCCTACATGGGGCGCACGGCCACCGAGGCCTGCAGGTTCTTCGTCATCTGCCAAGAGATT
GCGAGCGTCTGTCTCGGCCACGGCGCGGCGGCACCCGCCTCCCTTTCGTTTGCGGAGGCAAAGTTTCGGAGGCTC
CTGGCCTGGGCCGGCGGCCTGCCCCGAGAGGCCCTCGCCGGGGACCGGCCGCAGCCGCACGCCATCCTGCTCCAC
ATGTGGCTCCACTGCGTCGTGCTGCATCTGTTCCGCCCCTTTCTTGCAGATGCGGGGACCCGCCAGCCGCTGAGG
TCGTTCTCGTCCCCCGACGCCTGCCCCCAGACCGTCTCGGCCGCGTCCCTGCGGCAGCTGAAGCACCTGACGCTC
ATCTATTGCCAGGCGCAGCCCCGCTCGCGGCGCAGCCCCTACGCGGGCCCGTCGCTGATGCAGGCCATGCTCTGC
ATGCTCGGGGGGCAGCCGCCGGACCCGGACCGGCGCCCCTACCTCCTGCACGTCACCCGCTGCTGGGAGGAGCTC
TACGCCGGCTACCCGCTCTACGGGGAGATTGCGCAGGCGACGTGGGCCGTGGCCCTGCGCCGGGGCGTCGTGACG
GGCGCCGAGGCGCGCAGGCGCATGGACGAGTTTCGGCGCCCAGGCCGACAGCACGCGGCGGCGCCGACGTCGTCC
CTCGTCGCCGACTTCGACCTGGCCGCGCACGACGTCGACGCGGCCCGGATCGCGGCCGTGGCGAACGAGTTTAGC
GACCTCGTCATGTTTGACGAGCTGACCATCAACGACGACTTTAAGGCGCAGCGGCCGTGA
Transcript >Hirsu2|1733
ATGCCTCGCCGCCCCGGCTTCAGGAACCTCGTGGCGGCCCAGGCCCAGGCCGACGACGCCGCCCGCTGCCCTGCC
CGGCCCGGCACGTCCTGGAGCCTCGTCAGGCGCCGCCGGCCAATCAGCAAGATCGCCTGCGACTCGTGTCGCGCG
AGAAAGGTGGCCTGCGACGGTACACAACCGACCTGTCACCAGTGCCGTGACAGGAGGCTCAGGTGCGTCTACCGC
GCCCCGGACGCCAAGACGGTCCTCCAGCGCCTGCTGGCCGAGCGCGAGAGGGACTTCGGCGCCCTCCTCGACCGC
CTGTGCTCCCTGTCCAACGACGAGGCCGTCGACGTCCCCCGCCGCCTGCGCCCCGCCTCCGACCTGGCCACGGCC
CTGTCCTGCCTCGGCGCCGGCCCCGACCCGAGGCCGCCGCCCGCGCACGTCCTCGAGCCCCCGGCCCTGTGGCCC
CGGGTCGAGCTGGAGCTGACGGCCCTCCACCATGCCGTCTACCCCCTGCTCGCCCCGCTCGCCGCCCCGGCCGTC
GACCCGGCCGACTCGCCGCCCGGCCCGGACGCCGCCGCCTACTGCGACCCGCGCCTGCGCGCCCTCGACATCGCC
TACTGGACCGCCGTCCCCATCTCCGACGCCGCCGCCGCCGCCGCCCTGTCCCTGTACCTGACCCGCGACCACCCG
GCCCTGCCGCTCTTCGACGCCGACCTGTTCCTGGCCGACCTCGTCGACCGCAGATCGACCTGCTGCTCCGCCCTC
CTCGTGAGCTCCGTGCTTCACCTCGCCTGCGAGGCCGACTCCGCTTCCCGCCCGGACGCCTGGCCCCTCGCCCTC
TCCTTCTTTGCCGAGGCCGAGGGGCTCTGGAGGGCGGAGCAGGCGCGCGACTCGCTGCTGAACGTGGCCGCCGCC
CACTGCCTGGCCATTGGCTGCATCCTCGCCGGCCGCGATGCCCTCGGCCGCGACCTGATGGCCGCCGGCCGCCGC
ATGGCTCAGCGCCTGCGCCTGCTCGACGTCTGTGCCGACGAGGCCGACGTCGATACCCTGCTGGGGAAGCCCCCT
GACTGGGTCAGGTTCGCTTCGCACGTCGCCTGGGGCACCTACTGCCTTGCCACACTGGCCGCCTTCAACTACTAC
GACGAGCCGGTGGCCTTCCCTCCCGCGCTGCCGATCCCCGGCGACGTCGGCGAGCCCTCGGCCGACCCGTGGCCG
CCGCGGCCTCTCCCGGCCTACATGGGGCGCACGGCCACCGAGGCCTGCAGGTTCTTCGTCATCTGCCAAGAGATT
GCGAGCGTCTGTCTCGGCCACGGCGCGGCGGCACCCGCCTCCCTTTCGTTTGCGGAGGCAAAGTTTCGGAGGCTC
CTGGCCTGGGCCGGCGGCCTGCCCCGAGAGGCCCTCGCCGGGGACCGGCCGCAGCCGCACGCCATCCTGCTCCAC
ATGTGGCTCCACTGCGTCGTGCTGCATCTGTTCCGCCCCTTTCTTGCAGATGCGGGGACCCGCCAGCCGCTGAGG
TCGTTCTCGTCCCCCGACGCCTGCCCCCAGACCGTCTCGGCCGCGTCCCTGCGGCAGCTGAAGCACCTGACGCTC
ATCTATTGCCAGGCGCAGCCCCGCTCGCGGCGCAGCCCCTACGCGGGCCCGTCGCTGATGCAGGCCATGCTCTGC
ATGCTCGGGGGGCAGCCGCCGGACCCGGACCGGCGCCCCTACCTCCTGCACGTCACCCGCTGCTGGGAGGAGCTC
TACGCCGGCTACCCGCTCTACGGGGAGATTGCGCAGGCGACGTGGGCCGTGGCCCTGCGCCGGGGCGTCGTGACG
GGCGCCGAGGCGCGCAGGCGCATGGACGAGTTTCGGCGCCCAGGCCGACAGCACGCGGCGGCGCCGACGTCGTCC
CTCGTCGCCGACTTCGACCTGGCCGCGCACGACGTCGACGCGGCCCGGATCGCGGCCGTGGCGAACGAGTTTAGC
GACCTCGTCATGTTTGACGAGCTGACCATCAACGACGACTTTAAGGCGCAGCGGCCGTGA
Gene >Hirsu2|1733
ATGCCTCGCCGCCCCGGCTTCAGGAACCTCGTGGCGGCCCAGGCCCAGGCCGACGACGCCGCCCGCTGCCCTGCC
CGGCCCGGCACGTCCTGGAGCCTCGTCAGGCGCCGCCGGCCAATCAGCAAGATCGCCTGCGACTCGTGTCGCGCG
AGAAAGGTGGCCGTCCGTCTCGCCCCTCTCATCGTGCTCCAGACCGAAGAGTGACGACTGAATGACCTGATGGAC
TGCAGTGCGACGGTACACAACCGACCTGTCACCAGTGCCGTGACAGGAGGCTCAGGTGCGTCTACCGCGCCCCGG
ACGCCAAGACGGTCCTCCAGCGCCTGCTGGCCGAGCGCGAGAGGGACTTCGGCGCCCTCCTCGACCGCCTGTGCT
CCCTGTCCAACGACGAGGCCGTCGACGTCCCCCGCCGCCTGCGCCCCGCCTCCGACCTGGCCACGGCCCTGTCCT
GCCTCGGCGCCGGCCCCGACCCGAGGCCGCCGCCCGCGCACGTCCTCGAGCCCCCGGCCCTGTGGCCCCGGGTCG
AGCTGGAGCTGACGGCCCTCCACCATGCCGTCTACCCCCTGCTCGCCCCGCTCGCCGCCCCGGCCGTCGACCCGG
CCGACTCGCCGCCCGGCCCGGACGCCGCCGCCTACTGCGACCCGCGCCTGCGCGCCCTCGACATCGCCTACTGGA
CCGCCGTCCCCATCTCCGACGCCGCCGCCGCCGCCGCCCTGTCCCTGTACCTGACCCGCGACCACCCGGCCCTGC
CGCTCTTCGACGCCGACCTGTTCCTGGCCGACCTCGTCGACCGCAGATCGACCTGCTGCTCCGCCCTCCTCGTGA
GCTCCGTGCTTCACCTCGCCTGCGTAGGTGGTCATCGCCGGCCCGGCCACGGCTGCTGTTGCGCGCCCGCCCACT
GACCCATGCAGGAGGCCGACTCCGCTTCCCGCCCGGACGCCTGGCCCCTCGCCCTCTCCTTCTTTGCCGAGGCCG
AGGGGCTCTGGAGGGCGGAGCAGGCGCGCGACTCGCTGCTGAACGTGGCCGCCGCCCACTGCCTGGCCATTGGCT
GCATCCTCGCCGGCCGCGATGCCCTCGGCCGCGACCTGATGGCCGCCGGCCGCCGCATGGCTCAGCGCCTGCGCC
TGCTCGACGTCTGTGCCGACGAGGCCGACGTCGATACCCTGCTGGGGAAGCCCCCTGACTGGGTCAGGTTCGCTT
CGCACGTCGCCTGGGGCACCTACTGCCTTGCCACGTCAGTCATCTCCCCTCCCCCCCCTCTTGCAAGGCATCGCT
GCCGCCGTCGCGATATGACCGGATCGGGCAGCCCTGTCCTGACGGAATTGGGACAACAGACTGGCCGCCTTCAAC
TACTACGACGAGCCGGTGGCCTTCCCTCCCGCGCTGCCGATCCCCGGCGACGTCGGCGAGCCCTCGGCCGACCCG
TGGCCGCCGCGGCCTCTCCCGGCCTACATGGGGCGCACGGCCACCGAGGCCTGCAGGTTCTTCGTCATCTGCCAA
GAGATTGCGAGCGTCTGTCTCGGCCACGGCGCGGCGGCACCCGCCTCCCTTTCGTTTGCGGAGGCAAAGTTTCGG
AGGCTCCTGGCCTGGGCCGGCGGCCTGCCCCGAGAGGCCCTCGCCGGGGACCGGCCGCAGCCGCACGCCATCCTG
CTCCAGTAAGCACGCGGCCGTCGAGGGCCGAATGACGGGAGTGGGGGGGAGGCTGACGAGTGCAACAGCATGTGG
CTCCACTGCGTCGTGCTGCATCTGTTCCGCCCCTTTCTTGCAGATGCGGGGACCCGCCAGCCGCTGAGGTCGTTC
TCGTCCCCCGACGCCTGCCCCCAGACCGTCTCGGCCGCGTCCCTGCGGCAGCTGAAGCACCTGACGCTCATCTAT
TGCCAGGCGCAGCCCCGCTCGCGGCGCAGCCCCTACGCGGGCCCGTCGCTGATGCAGGCCATGCTCTGCATGCTC
GGGGGGCAGCCGCCGGACCCGGACCGGCGCCCCTACCTCCTGCACGTCACCCGCTGCTGGGAGGAGCTCTACGCC
GGCTACCCGCTCTACGGGGAGATTGCGCAGGCGACGTGGGCCGTGGCCCTGCGCCGGGGCGTCGTGACGGGCGCC
GAGGCGCGCAGGCGCATGGACGAGTTTCGGCGCCCAGGCCGACAGCACGCGGCGGCGCCGACGTCGTCCCTCGTC
GCCGACTTCGACCTGGCCGCGCACGACGTCGACGCGGCCCGGATCGCGGCCGTGGCGAACGAGTTTAGCGACCTC
GTCATGTTTGACGAGCTGACCATCAACGACGACTTTAAGGCGCAGCGGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail