Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1709
Gene name
LocationContig_1388:3234..5405
Strand-
Gene length (bp)2171
Transcript length (bp)1764
Coding sequence length (bp)1764
Protein length (aa) 588

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 5.4E-05 237 269

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 265 545 2.0E-41
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 235 545 4.0E-18
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 298 545 5.0E-15
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 8 122 1.0E-11
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 230 371 3.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 265 545 2.0E-41
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 235 545 4.0E-18
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 298 545 5.0E-15
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 8 122 1.0E-11
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 230 371 3.0E-07
sp|D4AY86|LYSM6_ARTBC LysM domain-containing protein ARB_01155/01156 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01155/01156 PE=3 SV=2 298 403 4.0E-07
sp|D4B4P8|LYSM2_ARTBC LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 238 374 1.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1709
MAYRLIKGYFYPEATLARTYTEACEKSLADFKASVIRRYGQEAWKDYFNADERGEAAVAVPLRLIPNLTSYLYRL
TCLKDSGRWCNIVAATAAMAQDPGSSRFSWGSVVANETTKPPSECDICFIKRLRMEASSPYFKGPRLSSLSVYQS
LTSKCSVTNIPPTTSTLGFSTPVATPPAAPSYTGDNYRIRPGDDCYSISRFQRVGTAWLLADNRLGAYCASFPES
GSLYIVNKCSVYTVKANDTCNGIARGHNITMPQLKLWNPIIDAGYYNLVKISGTALCVSVPGRPYTLPSSVVTGI
PGAPTTPAPVPGDIANGTTSRCARYHIVKPGEYCNGLVIKYGISQRHFSILNPSVNTNCTNLYAHESYCVAAPGY
SSAATTATTQPSTAFSLLPDSSMTPYPRNDTRLPLAEHTRNDCARYFNGSLFSDVKLPNVYAMAASIFHADLDAL
GIWNPSLGNTSRANYTFDTTRRYCGQLYYNADDEPTRKPATFELPKRARHVKECTRFNDMPDGWTYQDVFDYYRL
TAAEFYRLNPAVGPDCSNLWTTHIQSPAQYDSHGAGADAYGPGVQLQQVERGHQRRQLLGHG*
Coding >Hirsu2|1709
ATGGCCTACAGGCTCATTAAGGGTTATTTCTACCCGGAGGCGACTCTCGCCCGCACTTACACCGAGGCATGCGAA
AAGTCCTTAGCGGACTTTAAGGCGTCCGTCATTCGTCGCTACGGCCAGGAGGCATGGAAGGACTACTTCAACGCC
GACGAGAGGGGCGAGGCTGCCGTCGCCGTGCCGCTGCGCCTGATTCCCAACCTCACTAGCTATCTATATAGACTA
ACCTGCCTCAAGGACTCCGGGCGCTGGTGCAATATCGTGGCGGCGACGGCGGCCATGGCCCAGGATCCCGGCAGC
TCCCGCTTTAGCTGGGGCAGCGTCGTGGCCAACGAAACCACCAAGCCGCCATCCGAGTGCGATATATGCTTCATC
AAGCGGCTGCGGATGGAGGCTAGCTCGCCGTACTTTAAGGGCCCGCGGCTGTCGTCGCTGTCCGTATACCAGTCC
TTAACGTCCAAGTGCAGCGTAACCAACATACCGCCGACGACGTCGACGCTAGGCTTTTCCACGCCGGTCGCCACG
CCGCCGGCTGCACCGAGCTACACCGGAGATAACTACAGGATCCGGCCGGGCGACGACTGCTACAGCATCTCGCGG
TTCCAGCGGGTAGGGACGGCTTGGCTGCTCGCCGACAACAGACTCGGGGCGTATTGTGCTAGCTTCCCCGAGTCT
GGTAGCCTCTATATTGTCAATAAATGCAGTGTCTACACGGTTAAGGCCAACGATACCTGTAACGGCATTGCAAGG
GGCCACAACATCACTATGCCCCAGCTCAAGTTATGGAACCCGATAATCGATGCAGGCTACTACAACCTCGTCAAG
ATAAGCGGCACCGCGCTGTGCGTGTCGGTGCCGGGCCGGCCGTACACGCTACCGTCCTCCGTCGTCACGGGCATA
CCCGGCGCGCCGACGACACCGGCGCCCGTGCCCGGGGATATCGCCAACGGCACAACGAGTCGATGCGCGCGCTAT
CATATAGTGAAGCCGGGCGAGTACTGCAACGGGCTGGTCATTAAGTACGGCATCTCGCAGCGCCACTTTAGCATC
CTTAACCCGTCTGTTAATACCAACTGCACTAACCTATACGCGCACGAGAGCTATTGCGTGGCAGCGCCCGGGTAC
TCGAGTGCGGCGACGACGGCGACGACGCAGCCTAGCACAGCATTCAGCCTGCTCCCCGACTCGAGCATGACGCCG
TATCCGCGCAACGACACGCGGCTACCCCTTGCCGAACACACGCGCAACGACTGCGCCCGGTACTTTAACGGGTCG
CTGTTCTCCGACGTCAAGCTGCCCAACGTCTATGCCATGGCCGCCTCCATCTTCCACGCCGACCTAGACGCCCTC
GGCATCTGGAACCCTAGCCTGGGCAACACGTCGCGCGCCAACTACACCTTTGACACGACCCGGCGCTACTGTGGC
CAGCTGTATTATAATGCCGACGACGAGCCGACAAGGAAGCCTGCAACGTTTGAGCTGCCGAAACGCGCTAGACAC
GTCAAGGAGTGCACGCGCTTTAACGATATGCCCGACGGCTGGACCTATCAGGATGTCTTCGACTACTACCGCCTC
ACCGCTGCCGAGTTCTATAGGCTGAACCCGGCAGTTGGCCCAGACTGCTCCAACCTATGGACAACCCACATCCAG
TCTCCCGCCCAGTACGACAGCCACGGCGCCGGGGCCGACGCATACGGGCCAGGCGTCCAGCTGCAACAGGTAGAA
CGAGGCCATCAGCGGAGACAGCTGCTAGGCCATGGCTAA
Transcript >Hirsu2|1709
ATGGCCTACAGGCTCATTAAGGGTTATTTCTACCCGGAGGCGACTCTCGCCCGCACTTACACCGAGGCATGCGAA
AAGTCCTTAGCGGACTTTAAGGCGTCCGTCATTCGTCGCTACGGCCAGGAGGCATGGAAGGACTACTTCAACGCC
GACGAGAGGGGCGAGGCTGCCGTCGCCGTGCCGCTGCGCCTGATTCCCAACCTCACTAGCTATCTATATAGACTA
ACCTGCCTCAAGGACTCCGGGCGCTGGTGCAATATCGTGGCGGCGACGGCGGCCATGGCCCAGGATCCCGGCAGC
TCCCGCTTTAGCTGGGGCAGCGTCGTGGCCAACGAAACCACCAAGCCGCCATCCGAGTGCGATATATGCTTCATC
AAGCGGCTGCGGATGGAGGCTAGCTCGCCGTACTTTAAGGGCCCGCGGCTGTCGTCGCTGTCCGTATACCAGTCC
TTAACGTCCAAGTGCAGCGTAACCAACATACCGCCGACGACGTCGACGCTAGGCTTTTCCACGCCGGTCGCCACG
CCGCCGGCTGCACCGAGCTACACCGGAGATAACTACAGGATCCGGCCGGGCGACGACTGCTACAGCATCTCGCGG
TTCCAGCGGGTAGGGACGGCTTGGCTGCTCGCCGACAACAGACTCGGGGCGTATTGTGCTAGCTTCCCCGAGTCT
GGTAGCCTCTATATTGTCAATAAATGCAGTGTCTACACGGTTAAGGCCAACGATACCTGTAACGGCATTGCAAGG
GGCCACAACATCACTATGCCCCAGCTCAAGTTATGGAACCCGATAATCGATGCAGGCTACTACAACCTCGTCAAG
ATAAGCGGCACCGCGCTGTGCGTGTCGGTGCCGGGCCGGCCGTACACGCTACCGTCCTCCGTCGTCACGGGCATA
CCCGGCGCGCCGACGACACCGGCGCCCGTGCCCGGGGATATCGCCAACGGCACAACGAGTCGATGCGCGCGCTAT
CATATAGTGAAGCCGGGCGAGTACTGCAACGGGCTGGTCATTAAGTACGGCATCTCGCAGCGCCACTTTAGCATC
CTTAACCCGTCTGTTAATACCAACTGCACTAACCTATACGCGCACGAGAGCTATTGCGTGGCAGCGCCCGGGTAC
TCGAGTGCGGCGACGACGGCGACGACGCAGCCTAGCACAGCATTCAGCCTGCTCCCCGACTCGAGCATGACGCCG
TATCCGCGCAACGACACGCGGCTACCCCTTGCCGAACACACGCGCAACGACTGCGCCCGGTACTTTAACGGGTCG
CTGTTCTCCGACGTCAAGCTGCCCAACGTCTATGCCATGGCCGCCTCCATCTTCCACGCCGACCTAGACGCCCTC
GGCATCTGGAACCCTAGCCTGGGCAACACGTCGCGCGCCAACTACACCTTTGACACGACCCGGCGCTACTGTGGC
CAGCTGTATTATAATGCCGACGACGAGCCGACAAGGAAGCCTGCAACGTTTGAGCTGCCGAAACGCGCTAGACAC
GTCAAGGAGTGCACGCGCTTTAACGATATGCCCGACGGCTGGACCTATCAGGATGTCTTCGACTACTACCGCCTC
ACCGCTGCCGAGTTCTATAGGCTGAACCCGGCAGTTGGCCCAGACTGCTCCAACCTATGGACAACCCACATCCAG
TCTCCCGCCCAGTACGACAGCCACGGCGCCGGGGCCGACGCATACGGGCCAGGCGTCCAGCTGCAACAGGTAGAA
CGAGGCCATCAGCGGAGACAGCTGCTAGGCCATGGCTAA
Gene >Hirsu2|1709
ATGGCCTACAGGCTCATTAAGGGTTATTTCTACCCGGAGGCGACTCTCGCCCGCACTTACACCGAGGCATGCGAA
AAGTCCTTAGCGGACTTTAAGGCGTCCGTCATTCGTCGCTACGGCCAGGAGGCATGGAAGGACTACTTCAACGCC
GACGAGAGGGGCGAGGCTGCCGTCGCCGTGCCGCTGCGCCTGATTCCCAACCTCACTAGCTATCTATATAGACTA
ACCTGCCTCAAGGACTCCGGGCGCTGGTGCAATATCGTGGCGGCGACGGCGGCCATGGCCCAGGATCCCGGCAGT
AAGTGGCTCAGCTACGCCCCCGCCCCCTTCCCCTGCGTATTGCCGGCCTATTAATGCGTGCCAATGGCCACATAC
ATTCACAGGCTCCCGCTTTAGCTGGGGCAGCGTCGTGGCCAACGAAACCACCAAGCCGCCATCCGAGTGCGATAT
ATGCTTCATCAAGCGGCTGCGGATGGAGGCTAGCTCGCCGTACTTTAAGGGCCCGCGGCTGTCGTCGCTGTCCGT
ATACCAGTCCTTAACGTCCAAGTGCAGCGTAACCAACATACCGCCGACGACGTCGACGCTAGGCTTTTCCACGCC
GGTCGCCACGCCGCCGGCTGCACCGAGCTACACCGGAGATAACTACAGGATCCGGCCGGGCGACGACTGCTACAG
CATCTCGCGGTTCCAGCGGGTAGGGACGGCTTGGCTGCTCGCCGACAACAGACTCGGGGCGTATTGTGCTAGCTT
CCCCGAGTCTGGTAGCCTCTATATTGTCAATAAATGCAGTGTCTACACGGTTAAGGCCAACGATACCTGTAACGG
CATTGCAAGGGGCCACAACATCACTATGCCCCAGCTCAAGTTATGGAACCCGGTGGGTATCGGCCTCGTCCCCTT
TCCCTTGCAGCACCGGCTCAAGCATATCGTTAGATAATCGATGCAGGCTACTACAACCTCGTCAAGATAAGCGGC
ACCGCGCTGTGCGTGTCGGTGCCGGGCCGGCCGTACACGCTACCGTCCTCCGTCGTCACGGGCATACCCGGCGCG
CCGACGACACCGGCGCCCGTGCCCGGGGATATCGCCAACGGCACAACGAGTCGATGCGCGCGCTATCATATAGTG
AAGCCGGGCGAGTACTGCAACGGGCTGGTCATTAAGTACGGCATCTCGCAGCGCCACTTTAGCATCCTTAACCCG
TCTGTTAATACCAACTGCACTAACCTATACGCGCACGAGAGCTATTGCGTGGCAGCGGTAGGTAATAGTCAGTTG
CCCCCCTTGAGGCATCGTGTTCGTTTATTAGGTCTTATATCGTTCAGTTAACACGTATCCCGGCCAGCCCGGGTA
CTCGAGTGCGGCGACGACGGCGACGACGCAGCCTAGCACAGCATTCAGCCTGCTCCCCGACTCGAGCATGACGCC
GTATCCGCGCAACGACACGCGGCTACCCCTTGCCGAACACACGCGCAACGACTGCGCCCGGTACTTTAACGGGTC
GCTGTTCTCCGACGTCAAGCTGCCCAACGTCTATGCCATGGCCGCCTCCATCTTCCACGCCGACCTAGACGCCCT
CGGCATCTGGAACCCTAGCCTGGGCAACACGTCGCGCGCCAACTACACCTTTGACACGACCCGGCGCTACTGTGG
CCAGCTGTATTATAATGCCGACGACGAGCCGACAAGGAAGCCTGCAACGTTTGAGCTGCCGAAACGCGTAGGTTA
TCGTAAGCCCGCTTAAAGGCTTGGTGGTTGACTAATATATTGCGACGTCCAGGCTAGACACGTCAAGGAGTGCAC
GCGCTTTAACGATATGCCCGACGGCTGGACCTATCAGGATGTCTTCGACTACTACCGCCTCACCGCTGCCGAGTT
CTATAGGCTGAACCCGGCAGTTGGCCCAGACTGCTCCAACCTATGGACAAGTATATCAATCCCGCCGCCACTTTG
CTTCGTGTCAATGCCTGACCTTAGCGCGTCGCAGACCTCGCGTATTGCACGTCAAAGGAGCCAAACGCGGACGAG
TCTGACACTGTCGAACCAAAGCCCACATCCAGTCTCCCGCCCAGTACGACAGCCACGGCGCCGGGGCCGACGCAT
ACGGGCCAGGCGTCCAGCTGCAACAGGTAGAACGAGGCCATCAGCGGAGACAGCTGCTAGGCCATGGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail