Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1693
Gene name
Location	Contig_1383:47..560
Strand	+
Gene length (bp)	513
Transcript length (bp)	513
Coding sequence length (bp)	513
Protein length (aa)	171

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04172	LrgB	LrgB-like family	1.1E-08	1	61
PF04172	LrgB	LrgB-like family	1.7E-06	110	156

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	108	130	22
2	135	157	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1693 LGLPPPEALAFAARSTTLALARPAVRGVGGNLAVQAILVVSNGVLAQLLCPLLLDKLGVESAGDGDGSPARPPAD DAASPPPPPGRPGDKTGEPAPQGAQSARGESGSVTVAAGVAVGANGAAMGVSYLYEVRSHAAPYAALSMTVFGVM TVVFMTLDPFRSQVEGLARG*
Coding	>Hirsu2\|1693 CTGGGCCTTCCCCCGCCCGAGGCGCTTGCCTTCGCCGCCCGCAGCACCACCCTGGCCCTGGCCCGGCCGGCCGTC CGGGGCGTGGGGGGCAACCTCGCGGTCCAGGCCATCCTCGTCGTCAGCAACGGCGTCCTGGCGCAGCTGCTCTGC CCGCTCCTCCTCGACAAGCTGGGCGTCGAGAGCGCGGGAGACGGCGATGGGTCGCCCGCCCGTCCGCCCGCCGAC GACGCCGCCTCTCCTCCTCCTCCTCCCGGCCGGCCCGGAGACAAGACGGGAGAGCCGGCGCCGCAGGGCGCGCAG AGCGCGCGGGGTGAGAGCGGCTCGGTCACGGTGGCGGCGGGCGTCGCCGTCGGCGCCAACGGAGCCGCCATGGGC GTCTCATATCTTTACGAGGTCCGGAGCCACGCGGCCCCATACGCAGCCCTATCCATGACCGTCTTCGGAGTCATG ACCGTCGTCTTCATGACGCTTGACCCCTTCAGGAGCCAAGTCGAGGGCTTGGCAAGGGGCTAG
Transcript	>Hirsu2\|1693 CTGGGCCTTCCCCCGCCCGAGGCGCTTGCCTTCGCCGCCCGCAGCACCACCCTGGCCCTGGCCCGGCCGGCCGTC CGGGGCGTGGGGGGCAACCTCGCGGTCCAGGCCATCCTCGTCGTCAGCAACGGCGTCCTGGCGCAGCTGCTCTGC CCGCTCCTCCTCGACAAGCTGGGCGTCGAGAGCGCGGGAGACGGCGATGGGTCGCCCGCCCGTCCGCCCGCCGAC GACGCCGCCTCTCCTCCTCCTCCTCCCGGCCGGCCCGGAGACAAGACGGGAGAGCCGGCGCCGCAGGGCGCGCAG AGCGCGCGGGGTGAGAGCGGCTCGGTCACGGTGGCGGCGGGCGTCGCCGTCGGCGCCAACGGAGCCGCCATGGGC GTCTCATATCTTTACGAGGTCCGGAGCCACGCGGCCCCATACGCAGCCCTATCCATGACCGTCTTCGGAGTCATG ACCGTCGTCTTCATGACGCTTGACCCCTTCAGGAGCCAAGTCGAGGGCTTGGCAAGGGGCTAG
Gene	>Hirsu2\|1693 CTGGGCCTTCCCCCGCCCGAGGCGCTTGCCTTCGCCGCCCGCAGCACCACCCTGGCCCTGGCCCGGCCGGCCGTC CGGGGCGTGGGGGGCAACCTCGCGGTCCAGGCCATCCTCGTCGTCAGCAACGGCGTCCTGGCGCAGCTGCTCTGC CCGCTCCTCCTCGACAAGCTGGGCGTCGAGAGCGCGGGAGACGGCGATGGGTCGCCCGCCCGTCCGCCCGCCGAC GACGCCGCCTCTCCTCCTCCTCCTCCCGGCCGGCCCGGAGACAAGACGGGAGAGCCGGCGCCGCAGGGCGCGCAG AGCGCGCGGGGTGAGAGCGGCTCGGTCACGGTGGCGGCGGGCGTCGCCGTCGGCGCCAACGGAGCCGCCATGGGC GTCTCATATCTTTACGAGGTCCGGAGCCACGCGGCCCCATACGCAGCCCTATCCATGACCGTCTTCGGAGTCATG ACCGTCGTCTTCATGACGCTTGACCCCTTCAGGAGCCAAGTCGAGGGCTTGGCAAGGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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