Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1692
Gene name
Location	Contig_1382:4454..5160
Strand	-
Gene length (bp)	706
Transcript length (bp)	522
Coding sequence length (bp)	522
Protein length (aa)	174

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16015	Promethin	Promethin	2.1E-32	32	136

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 57	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	58	80	22
2	85	107	22
3	114	136	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1692 MASSQDQRRRSSSFRDSVNDKAAGVYALAQRSLDYVVAPSSRRRAYDSASSLASSRPILFSFAVSQLLFSFLPLL FFALFSAGTVAFALGLAILFSLFWIGLALLVLVPTLLVASSIAVLVWAWAVGSFLVARWLYLHAPVAVAGGLHVD AAGRHLHVVKGENGVGGSVDGAH*
Coding	>Hirsu2\|1692 ATGGCGTCGTCGCAGGACCAGCGCCGTCGAAGCAGCAGCTTCCGCGACTCGGTCAACGACAAGGCTGCCGGCGTC TACGCCTTGGCCCAGCGCTCTCTCGACTACGTCGTCGCCCCGTCGTCGCGCCGCCGCGCATACGACTCGGCCTCG TCTCTCGCCTCGTCGCGGCCCATTCTCTTTTCCTTCGCCGTCTCGCAGCTCCTCTTCTCCTTCCTGCCGCTCCTC TTCTTCGCCCTCTTCTCCGCCGGCACCGTCGCCTTCGCCCTCGGTCTCGCCATCCTCTTCTCCCTCTTCTGGATC GGCCTCGCCCTGCTGGTCCTCGTCCCCACCCTGCTCGTCGCCTCGTCCATCGCCGTCCTCGTCTGGGCCTGGGCC GTCGGCAGCTTCCTCGTCGCCCGCTGGCTCTACCTCCACGCCCCCGTCGCCGTCGCCGGCGGCCTGCACGTCGAC GCCGCCGGTAGGCACCTGCACGTCGTCAAGGGCGAAAACGGCGTCGGCGGCAGCGTCGACGGCGCCCACTGA
Transcript	>Hirsu2\|1692 ATGGCGTCGTCGCAGGACCAGCGCCGTCGAAGCAGCAGCTTCCGCGACTCGGTCAACGACAAGGCTGCCGGCGTC TACGCCTTGGCCCAGCGCTCTCTCGACTACGTCGTCGCCCCGTCGTCGCGCCGCCGCGCATACGACTCGGCCTCG TCTCTCGCCTCGTCGCGGCCCATTCTCTTTTCCTTCGCCGTCTCGCAGCTCCTCTTCTCCTTCCTGCCGCTCCTC TTCTTCGCCCTCTTCTCCGCCGGCACCGTCGCCTTCGCCCTCGGTCTCGCCATCCTCTTCTCCCTCTTCTGGATC GGCCTCGCCCTGCTGGTCCTCGTCCCCACCCTGCTCGTCGCCTCGTCCATCGCCGTCCTCGTCTGGGCCTGGGCC GTCGGCAGCTTCCTCGTCGCCCGCTGGCTCTACCTCCACGCCCCCGTCGCCGTCGCCGGCGGCCTGCACGTCGAC GCCGCCGGTAGGCACCTGCACGTCGTCAAGGGCGAAAACGGCGTCGGCGGCAGCGTCGACGGCGCCCACTGA
Gene	>Hirsu2\|1692 ATGGCGTCGTCGCAGGACCAGCGCCGTCGAAGCAGCAGCTTCCGCGACTCGGTCAACGACAAGGCTGCCGGCGTC TACGCCTTGGCCCAGCGCTCTCTCGACTACGTCGTCGCCCCGTCGTCGCGCCGCCGCGCATACGACTCGGCCTCG TCTCTCGCCTCGTCGCGGCCCATTCTCTTTGTACGTCCCGATCCCCCGCCATGGACGGCCTGGGTCAAGCTTGTG CATGCCACGTTGTGTACATACAGACTGTGCACGCCGCATGAGACAAGACGGTCTCGTCGCCGTCCTTTTGCATCT TTCTTTTTTCCTCTCGGCCTTGTGAGACTCCGATCCCCCCGCTGACCGGCGCTGCCCGCTCCAGTCCTTCGCCGT CTCGCAGCTCCTCTTCTCCTTCCTGCCGCTCCTCTTCTTCGCCCTCTTCTCCGCCGGCACCGTCGCCTTCGCCCT CGGTCTCGCCATCCTCTTCTCCCTCTTCTGGATCGGCCTCGCCCTGCTGGTCCTCGTCCCCACCCTGCTCGTCGC CTCGTCCATCGCCGTCCTCGTCTGGGCCTGGGCCGTCGGCAGCTTCCTCGTCGCCCGCTGGCTCTACCTCCACGC CCCCGTCGCCGTCGCCGGCGGCCTGCACGTCGACGCCGCCGGTAGGCACCTGCACGTCGTCAAGGGCGAAAACGG CGTCGGCGGCAGCGTCGACGGCGCCCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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