© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1686 |
| Gene name | |
| Location | Contig_1381:22..490 |
| Strand | + |
| Gene length (bp) | 468 |
| Transcript length (bp) | 468 |
| Coding sequence length (bp) | 468 |
| Protein length (aa) | 156 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 2.9E-24 | 31 | 139 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTS8|YI7B_SCHPO | UPF0695 membrane protein C977.11/PB8B6.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.11 PE=3 SV=1 | 10 | 151 | 5.0E-18 |
| sp|Q08913|YO390_YEAST | UPF0695 membrane protein YOR390W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR390W PE=3 SV=1 | 22 | 154 | 8.0E-17 |
| sp|Q08991|YP279_YEAST | UPF0695 membrane protein YPL279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL279C PE=3 SV=1 | 22 | 154 | 3.0E-16 |
| sp|A5GAD3|CRCB_GEOUR | Putative fluoride ion transporter CrcB OS=Geobacter uraniireducens (strain Rf4) GN=crcB PE=3 SV=1 | 34 | 132 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 19 | 17 |
| 2 | 29 | 50 | 21 |
| 3 | 57 | 79 | 22 |
| 4 | 94 | 116 | 22 |
| 5 | 121 | 143 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1686 LCVLLGWGCWLGAVLLSVWPPRDFWRGRATLALVFAPPGCLLRFYLAALLNGRRPAFPLGTFAANVFGCAVLAMA WDIAHVPVGGYVGCQVLQGIEDGFCGCLTTISTWVAELAALRRLHAYLYGAASVLVSFALMVVIMGGLRWTDGFS HLDCH* |
| Coding | >Hirsu2|1686 CTGTGCGTCCTGCTCGGCTGGGGCTGCTGGCTCGGCGCCGTGCTGCTGTCCGTCTGGCCGCCGCGCGACTTCTGG CGCGGCCGCGCCACGCTCGCCCTCGTCTTCGCCCCGCCCGGCTGCCTGCTGCGCTTCTACCTGGCCGCCCTGCTC AACGGCCGCCGGCCGGCCTTCCCGCTCGGCACCTTCGCCGCCAACGTCTTCGGCTGCGCCGTGCTGGCCATGGCC TGGGACATCGCCCATGTGCCCGTCGGCGGCTACGTCGGCTGCCAGGTCCTGCAGGGCATCGAGGACGGCTTCTGC GGCTGCCTGACCACCATCTCGACCTGGGTCGCCGAGCTGGCCGCCCTGCGCCGCCTGCACGCCTACCTCTACGGC GCCGCCAGCGTCCTCGTCTCCTTTGCGCTCATGGTCGTCATCATGGGCGGCCTGCGCTGGACCGACGGCTTCAGC CACCTCGACTGCCACTGA |
| Transcript | >Hirsu2|1686 CTGTGCGTCCTGCTCGGCTGGGGCTGCTGGCTCGGCGCCGTGCTGCTGTCCGTCTGGCCGCCGCGCGACTTCTGG CGCGGCCGCGCCACGCTCGCCCTCGTCTTCGCCCCGCCCGGCTGCCTGCTGCGCTTCTACCTGGCCGCCCTGCTC AACGGCCGCCGGCCGGCCTTCCCGCTCGGCACCTTCGCCGCCAACGTCTTCGGCTGCGCCGTGCTGGCCATGGCC TGGGACATCGCCCATGTGCCCGTCGGCGGCTACGTCGGCTGCCAGGTCCTGCAGGGCATCGAGGACGGCTTCTGC GGCTGCCTGACCACCATCTCGACCTGGGTCGCCGAGCTGGCCGCCCTGCGCCGCCTGCACGCCTACCTCTACGGC GCCGCCAGCGTCCTCGTCTCCTTTGCGCTCATGGTCGTCATCATGGGCGGCCTGCGCTGGACCGACGGCTTCAGC CACCTCGACTGCCACTGA |
| Gene | >Hirsu2|1686 CTGTGCGTCCTGCTCGGCTGGGGCTGCTGGCTCGGCGCCGTGCTGCTGTCCGTCTGGCCGCCGCGCGACTTCTGG CGCGGCCGCGCCACGCTCGCCCTCGTCTTCGCCCCGCCCGGCTGCCTGCTGCGCTTCTACCTGGCCGCCCTGCTC AACGGCCGCCGGCCGGCCTTCCCGCTCGGCACCTTCGCCGCCAACGTCTTCGGCTGCGCCGTGCTGGCCATGGCC TGGGACATCGCCCATGTGCCCGTCGGCGGCTACGTCGGCTGCCAGGTCCTGCAGGGCATCGAGGACGGCTTCTGC GGCTGCCTGACCACCATCTCGACCTGGGTCGCCGAGCTGGCCGCCCTGCGCCGCCTGCACGCCTACCTCTACGGC GCCGCCAGCGTCCTCGTCTCCTTTGCGCTCATGGTCGTCATCATGGGCGGCCTGCGCTGGACCGACGGCTTCAGC CACCTCGACTGCCACTGA |