Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1682
Gene name
LocationContig_1380:182..2122
Strand-
Gene length (bp)1940
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 4.7E-48 52 500
PF00324 AA_permease Amino acid permease 6.9E-27 64 512

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 5 523 2.0E-71
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 32 523 1.0E-65
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 6 517 2.0E-65
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 20 520 1.0E-62
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 38 495 2.0E-60
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Swissprot ID Swissprot Description Start End E-value
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 5 523 2.0E-71
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 32 523 1.0E-65
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 6 517 2.0E-65
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 20 520 1.0E-62
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 38 495 2.0E-60
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 2 523 2.0E-55
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 35 520 2.0E-53
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 32 520 2.0E-50
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 30 525 9.0E-50
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 4 525 9.0E-45
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 35 494 1.0E-43
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 35 523 3.0E-42
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 24 520 2.0E-40
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 11 494 2.0E-30
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 29 511 1.0E-24
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 69 504 2.0E-20
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 54 76 22
2 86 105 19
3 138 160 22
4 183 205 22
5 212 231 19
6 256 278 22
7 291 313 22
8 342 364 22
9 393 415 22
10 421 443 22
11 456 478 22
12 493 512 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1682
MSLDGKRETGKPDSMDPKLEQPPRLSTGADHDSADQLLENLGYKPELARTRSTLQVAFMSFVMAAIPYGLATTLN
YPLVGGGPVDIIWGWLLVSAIIICVAASLGEITSVYPTAGGVYYQAFMLAPPRWRRIASWVCGWLYVVGNITITL
AVNFGTTLFIVSCINVFEKAPGVGVFDAANYQVFLIFLLITIMCNAISALANRWLPWLDTAAIYFTFAGVVAIMV
TILAVAKNGRRSAKFVFTHFEANSGWPDGWSFFVGLLHAGYATSSTGMIISMCEEVQKPSVQVPKAMVGTIALNT
VAGFLFLIPLVFVLPDIKTLINVSAGQPVPAIIKDAVGSSGGAFGLLVPIMVLGLMCGIGCTTASSRCTWAFARD
GAIPGSRWWMNVNRKLDVPLNAMMLSMAVQIILGLIYFGSSAAFNAFTGVGVICLTASYAVPISISLLTGRKQVR
TGDFYLGPIGSVCNVVAILWTLLAMPLFCMPSTVPITATTANYAPAVFVAAMGISGLWYWVWGHKNYAGPPVQGE
*
Coding >Hirsu2|1682
ATGAGTCTCGACGGCAAACGCGAGACCGGCAAGCCCGACAGCATGGACCCCAAGCTGGAGCAGCCGCCCCGGCTG
TCCACCGGCGCCGACCACGACTCGGCCGACCAGCTGCTCGAGAATCTCGGCTACAAGCCCGAGCTGGCCCGGACC
CGATCGACGCTGCAAGTCGCCTTCATGTCCTTTGTCATGGCTGCCATCCCCTACGGCCTCGCCACAACCCTCAAC
TATCCCCTGGTCGGAGGGGGTCCCGTCGACATCATCTGGGGCTGGCTGCTCGTGTCCGCCATCATCATCTGTGTT
GCTGCGTCCCTTGGTGAAATCACGAGTGTCTACCCCACAGCCGGAGGTGTCTACTACCAGGCCTTTATGCTGGCG
CCTCCCCGCTGGCGCCGCATCGCCAGTTGGGTCTGCGGTTGGCTGTATGTTGTCGGCAACATTACCATTACCCTG
GCAGTCAACTTTGGCACTACCCTCTTCATCGTCTCCTGCATCAATGTGTTTGAGAAGGCTCCAGGCGTCGGCGTC
TTTGATGCCGCCAACTACCAGGTCTTTCTCATCTTTCTCCTCATCACCATCATGTGCAACGCCATCTCTGCGCTC
GCCAACCGCTGGCTTCCTTGGCTTGACACCGCCGCCATCTACTTCACCTTCGCCGGTGTCGTTGCTATCATGGTG
ACCATTCTCGCCGTCGCCAAGAACGGCCGTCGCTCGGCCAAGTTCGTCTTTACCCACTTCGAAGCCAACTCAGGC
TGGCCGGACGGCTGGTCCTTCTTCGTCGGCCTTCTCCACGCAGGCTACGCTACGTCCTCGACAGGCATGATCATT
TCCATGTGCGAGGAGGTGCAGAAGCCCTCTGTCCAGGTGCCCAAGGCCATGGTGGGGACCATTGCCCTCAATACC
GTGGCCGGCTTCCTGTTCCTGATCCCCCTCGTCTTCGTCCTTCCGGACATCAAGACGCTCATCAACGTGTCCGCC
GGCCAGCCCGTGCCCGCCATAATCAAGGATGCCGTCGGCTCCTCGGGCGGGGCCTTTGGCCTCTTGGTCCCCATC
ATGGTGCTGGGCCTCATGTGCGGCATCGGATGCACGACAGCCTCGTCCCGCTGCACCTGGGCCTTTGCTCGCGAC
GGCGCGATTCCCGGCTCTCGCTGGTGGATGAACGTCAACCGCAAGCTCGATGTCCCCCTCAACGCCATGATGCTG
AGCATGGCGGTGCAAATCATACTTGGCCTCATCTACTTTGGCTCCTCGGCAGCCTTCAACGCCTTCACCGGCGTC
GGCGTCATATGCCTGACAGCCTCGTATGCCGTTCCCATCAGCATCAGTCTGTTGACCGGGAGGAAGCAAGTCAGG
ACTGGAGACTTCTACCTCGGCCCGATTGGCAGTGTTTGCAACGTGGTCGCAATCCTGTGGACTTTGCTTGCAATG
CCCTTGTTCTGCATGCCCTCGACGGTTCCTATCACGGCGACAACGGCCAACTACGCGCCGGCCGTCTTCGTGGCT
GCCATGGGCATCTCTGGCCTCTGGTATTGGGTCTGGGGCCACAAGAACTACGCTGGCCCTCCCGTGCAGGGAGAG
TAA
Transcript >Hirsu2|1682
ATGAGTCTCGACGGCAAACGCGAGACCGGCAAGCCCGACAGCATGGACCCCAAGCTGGAGCAGCCGCCCCGGCTG
TCCACCGGCGCCGACCACGACTCGGCCGACCAGCTGCTCGAGAATCTCGGCTACAAGCCCGAGCTGGCCCGGACC
CGATCGACGCTGCAAGTCGCCTTCATGTCCTTTGTCATGGCTGCCATCCCCTACGGCCTCGCCACAACCCTCAAC
TATCCCCTGGTCGGAGGGGGTCCCGTCGACATCATCTGGGGCTGGCTGCTCGTGTCCGCCATCATCATCTGTGTT
GCTGCGTCCCTTGGTGAAATCACGAGTGTCTACCCCACAGCCGGAGGTGTCTACTACCAGGCCTTTATGCTGGCG
CCTCCCCGCTGGCGCCGCATCGCCAGTTGGGTCTGCGGTTGGCTGTATGTTGTCGGCAACATTACCATTACCCTG
GCAGTCAACTTTGGCACTACCCTCTTCATCGTCTCCTGCATCAATGTGTTTGAGAAGGCTCCAGGCGTCGGCGTC
TTTGATGCCGCCAACTACCAGGTCTTTCTCATCTTTCTCCTCATCACCATCATGTGCAACGCCATCTCTGCGCTC
GCCAACCGCTGGCTTCCTTGGCTTGACACCGCCGCCATCTACTTCACCTTCGCCGGTGTCGTTGCTATCATGGTG
ACCATTCTCGCCGTCGCCAAGAACGGCCGTCGCTCGGCCAAGTTCGTCTTTACCCACTTCGAAGCCAACTCAGGC
TGGCCGGACGGCTGGTCCTTCTTCGTCGGCCTTCTCCACGCAGGCTACGCTACGTCCTCGACAGGCATGATCATT
TCCATGTGCGAGGAGGTGCAGAAGCCCTCTGTCCAGGTGCCCAAGGCCATGGTGGGGACCATTGCCCTCAATACC
GTGGCCGGCTTCCTGTTCCTGATCCCCCTCGTCTTCGTCCTTCCGGACATCAAGACGCTCATCAACGTGTCCGCC
GGCCAGCCCGTGCCCGCCATAATCAAGGATGCCGTCGGCTCCTCGGGCGGGGCCTTTGGCCTCTTGGTCCCCATC
ATGGTGCTGGGCCTCATGTGCGGCATCGGATGCACGACAGCCTCGTCCCGCTGCACCTGGGCCTTTGCTCGCGAC
GGCGCGATTCCCGGCTCTCGCTGGTGGATGAACGTCAACCGCAAGCTCGATGTCCCCCTCAACGCCATGATGCTG
AGCATGGCGGTGCAAATCATACTTGGCCTCATCTACTTTGGCTCCTCGGCAGCCTTCAACGCCTTCACCGGCGTC
GGCGTCATATGCCTGACAGCCTCGTATGCCGTTCCCATCAGCATCAGTCTGTTGACCGGGAGGAAGCAAGTCAGG
ACTGGAGACTTCTACCTCGGCCCGATTGGCAGTGTTTGCAACGTGGTCGCAATCCTGTGGACTTTGCTTGCAATG
CCCTTGTTCTGCATGCCCTCGACGGTTCCTATCACGGCGACAACGGCCAACTACGCGCCGGCCGTCTTCGTGGCT
GCCATGGGCATCTCTGGCCTCTGGTATTGGGTCTGGGGCCACAAGAACTACGCTGGCCCTCCCGTGCAGGGAGAG
TAA
Gene >Hirsu2|1682
ATGAGTCTCGACGGCAAACGCGAGACCGGCAAGCCCGACAGCATGGACCCCAAGCTGGAGCAGCCGCCCCGGCTG
TCCACCGGCGCCGACCACGACTCGGCCGACCAGCTGCTCGAGAATCTCGGCTACAAGCCCGAGCTGGCCCGGACC
CGATCGACGCTGCAAGTCGCCTTCATGTCCTTTGTCATGGCTGCCATCCCCTACGGCCTCGCCACAACCCTCAAC
TATCCCCTGGTCGGAGGGGGTCCCGTCGACATCATCTGGGGCTGGCTGCTCGTGTCCGCCATCATCATCTGTGTT
GCTGCGTCCCTTGGTGAAATCACGAGTGTCTACCCCACAGCCGGAGGTACATACAACTTGCGTCTTGGGCCCGTG
CCGTCGCGCCGCTCCTCGGGACTCAAATCCGCCCATCCGCTCCGCTTCTTCCCTCGCCCTTTGAGCTCATATAAT
TGATCCTTCTTTTCTCCCGCAGGTGTCTACTACCAGGCCTTTATGCTGGCGCCTCCCCGCTGGCGCCGCATCGCC
AGTTGGGTCTGCGGTTGGCTGTATGTTGTCGGCAACATTACCATTACCCTGGCAGTCAACTTTGGCACTACCCTC
TTCATCGTCTCCTGCATCAATGTGTTTGAGAAGGCTCCAGGCGTCGGCGTCTTTGATGCCGCCAACTACCAGGTC
TTTCTCATCTTTCTCCTCATCACCATCATGTGCAACGCCATCTCTGCGCTCGCCAACCGCTGGCTTCCTTGGCTT
GACGTGGGTCGACCCCCGGAGCCCCGCTCCTTGTTCCCCCTTTACTTTCCCTCTTCCGCCTTCCGCCTCTGGCCC
GTCTCATCGGCCTGACGCCGTCGCTGATCTTGCTCCAGACCGCCGCCATCTACTTCACCTTCGCCGGTGTCGTTG
CTATCATGGTGACCATTCTCGCCGTCGCCAAGAACGGCCGTCGCTCGGCCAAGTTCGTCTTTACCCACTTCGAAG
CCAACTCAGGCTGGCCGGACGGCTGGTCCTTCTTCGTCGGCCTTCTCCACGCAGGCTACGCTACGTCCTCGACAG
GCATGATCATTTCGTGAGTGCCGCTTCCACGACCCGCTGGTGTGCCCCGGCCGCGAGGCTAATCGACGCCTGCTG
CAGCATGTGCGAGGAGGTGCAGAAGCCCTCTGTCCAGGTGCCCAAGGCCATGGTGGGGACCATTGCCCTCAATAC
CGTGGCCGGCTTCCTGTTCCTGATCCCCCTCGTCTTCGTCCTTCCGGACATCAAGACGCTCATCAACGTGTCCGC
CGGCCAGCCCGTGCCCGCCATAATCAAGGATGCCGTCGGCTCCTCGGGCGGGGCCTTTGGCCTCTTGGTCCCCAT
CATGGTGCTGGGCCTCATGTGCGGCATCGGATGCACGACAGCCTCGTCCCGCTGCACCTGGGCCTTTGCTCGCGA
CGGCGCGATTCCCGGCTCTCGCTGGTGGATGAACGTCAACCGCAAGCTCGATGTCCCCCTCAACGCCATGATGCT
GAGCATGGCGGTGCAAATCATACTTGGCCTCATCTACTTTGGCTCCTCGGCAGCCTTCAACGCCTTCACCGGCGT
CGGCGTCATATGCCTGACAGCCTCGTATGCCGTTCCCATCAGCATCAGTCTGTTGACCGGGAGGAAGCAAGTCAG
GACTGGAGACTTCTACCTCGGCCCGATTGGCAGTGTTTGCAACGTGGTCGCAATCCGTGAGTATATATCTATCCA
TCTGGCCCCCCCCCCCCCCCCNNCCTGCTCACCTCTTCGCAGTGTGGACTTTGCTTGCAATGCCCTTGTTCTGCA
TGCCCTCGACGGTTCCTATCACGGCGACAACGGCCAACTACGCGCCGGCCGTCTTCGTGGCTGCCATGGGCATCT
CTGGCCTCTGGTATTGGGTCTGGGGCCACAAGAACTACGCTGGCCCTCCCGTGCAGGGAGAGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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