© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|168 |
| Gene name | |
| Location | Contig_1028:4447..5825 |
| Strand | - |
| Gene length (bp) | 1378 |
| Transcript length (bp) | 738 |
| Coding sequence length (bp) | 738 |
| Protein length (aa) | 246 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5358 | 0.5201 | 0.3445 | 0.0754 | 0.2093 | 0.194 | 0.2445 | 0.1833 | 0.2627 | 0.0405 |
| Orthofinder run ID | 4 |
| Orthogroup | 8885 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|168 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|168 MLGDRLAFGTNSSGRPSGLGTAACRLANVPDGQGALLCRRPSADAPTRRASGREGVEGEGEDAAEAGPGMPSLGL ASCVSRRPSAGRVSSPPADPEASLGIGIPGSGPGPVSCLLVPGPSRPSAPPAATYLLKQVPQPPPALHRARETRQ RHGWPLSLEASSLAAQPALPRALRYRSLATAASPVSPWIRSSKTWTRATTAATCLGRRPAVTPSMPPPQLPCATR GDGHRGWARLESRPPRLAGG* |
| Coding | >Hirsu2|168 ATGCTCGGCGATCGACTAGCCTTTGGTACGAATAGCTCCGGTCGGCCATCGGGCCTCGGCACCGCCGCGTGCCGC CTGGCGAACGTTCCGGATGGCCAAGGTGCCCTTCTATGCCGACGCCCCAGTGCCGATGCCCCGACGAGACGCGCC AGCGGGCGAGAAGGTGTCGAGGGCGAGGGTGAGGACGCGGCCGAGGCTGGCCCGGGAATGCCCTCGCTCGGCCTA GCATCGTGCGTCAGTCGTCGTCCGTCAGCCGGCCGAGTCAGCTCTCCGCCTGCAGACCCAGAGGCGAGTCTGGGC ATAGGCATACCGGGCAGCGGGCCAGGACCCGTGTCCTGTCTCCTAGTGCCGGGCCCCTCCAGGCCGTCAGCGCCG CCAGCTGCCACCTACCTTCTAAAGCAGGTGCCTCAGCCACCACCAGCTCTGCATCGCGCACGTGAGACGAGACAG CGACACGGATGGCCCTTGTCTCTGGAAGCGTCGAGCCTTGCCGCGCAACCGGCGTTGCCGCGCGCGCTGCGTTAT CGATCCCTCGCCACCGCGGCCTCTCCCGTCAGCCCTTGGATCCGGAGCTCGAAGACATGGACTCGCGCGACGACG GCCGCGACATGTCTTGGTCGCCGACCTGCCGTGACGCCCTCGATGCCTCCTCCTCAGCTGCCCTGTGCGACTCGC GGCGACGGCCACCGCGGCTGGGCCCGCCTCGAGTCACGTCCGCCTCGCCTGGCGGGAGGATGA |
| Transcript | >Hirsu2|168 ATGCTCGGCGATCGACTAGCCTTTGGTACGAATAGCTCCGGTCGGCCATCGGGCCTCGGCACCGCCGCGTGCCGC CTGGCGAACGTTCCGGATGGCCAAGGTGCCCTTCTATGCCGACGCCCCAGTGCCGATGCCCCGACGAGACGCGCC AGCGGGCGAGAAGGTGTCGAGGGCGAGGGTGAGGACGCGGCCGAGGCTGGCCCGGGAATGCCCTCGCTCGGCCTA GCATCGTGCGTCAGTCGTCGTCCGTCAGCCGGCCGAGTCAGCTCTCCGCCTGCAGACCCAGAGGCGAGTCTGGGC ATAGGCATACCGGGCAGCGGGCCAGGACCCGTGTCCTGTCTCCTAGTGCCGGGCCCCTCCAGGCCGTCAGCGCCG CCAGCTGCCACCTACCTTCTAAAGCAGGTGCCTCAGCCACCACCAGCTCTGCATCGCGCACGTGAGACGAGACAG CGACACGGATGGCCCTTGTCTCTGGAAGCGTCGAGCCTTGCCGCGCAACCGGCGTTGCCGCGCGCGCTGCGTTAT CGATCCCTCGCCACCGCGGCCTCTCCCGTCAGCCCTTGGATCCGGAGCTCGAAGACATGGACTCGCGCGACGACG GCCGCGACATGTCTTGGTCGCCGACCTGCCGTGACGCCCTCGATGCCTCCTCCTCAGCTGCCCTGTGCGACTCGC GGCGACGGCCACCGCGGCTGGGCCCGCCTCGAGTCACGTCCGCCTCGCCTGGCGGGAGGATGA |
| Gene | >Hirsu2|168 ATGCTCGGCGATCGACTAGCCTTTGGTACGAATAGCTCCGGTCGGCCATCGGGCCTCGGCACCGCCGCGTGCCGC CTGGCGAACGTTCCGGATGGCCAAGGTGCCCTTCTATGCCGACGCCCCAGTGCCGATGCCCCGACGAGACGCGCC AGCGGGCGAGAAGGTGTCGAGGGCGAGGGTGAGGACGCGGCCGAGGCTGGCCCGGGAATGCCCTCGCTCGGCCTA GCATCGTGCGTCAGTCGTCGTCCGTCAGCCGGCCGAGTCAGCTCTCCGCCTGCAGACCCAGAGGCGAGTCTGGGC ATAGGCATACCGGGCAGCGGGCCAGGACCCGTGTCGTGTGTCTGCCGTAGCCTCAAGCAGCCTGCCTTGCCTTGG CTGTCCCGGTAGCTTGGCCGTCGCCGTCCGTGACGCGCTCCGTTCTTGGCTAGGCACCCGCCATGGACACGCAAC GGCTGCTCGGTGACGACGGAAGAAGAACGAGGACGTGAGGAGGAGCAGCCGTTTCCAATTGCAAAGCACGGGTAC ACAATGTGTCACCTCTGCAACCCCGTGCTCGTCATTCATCGGCAAGCCACCCCCCCCCCCCGGCTGGCCATGACG GGCAGCGAGCTTCCAGGCCCTCCTCCACAGTAGTGCGCAAGCTTGCTTCTCCGGCAAGCCACACCTTCTCTCGCT CCGGCACCGCTGGCGGTCGAACGGCGTGAGCCGGGATCGTGCTGCGCCTTTATCGGCACCTGCTGTCCAGTAGCC GGCGGGTGTCGCGGCCGCGCGCCTGTCGGCATCTGATCCGACCGACGGCCGAAGGGAACCCGTCGCCCGTCTCTC CTCTTTCAGCACGCCGATGACCGCCAGTCTCCGGCAGATACATGTGAAAGAGAGTGAAAGAGAGGCAAGAGGCCA GCCAGCTGGGGGAGACGAGAGAGGCGGTGCATGTCGGCGCATGCGTACGTACGCGGTAGACTTACACAGCACTAG CTGTCTCCTAGTGCCGGGCCCCTCCAGGCCGTCAGCGCCGCCAGCTGCCACCTACCTTCTAAAGCAGGTGCCTCA GCCACCACCAGCTCTGCATCGCGCACGTGAGACGAGACAGCGACACGGATGGCCCTTGTCTCTGGAAGCGTCGAG CCTTGCCGCGCAACCGGCGTTGCCGCGCGCGCTGCGTTATCGATCCCTCGCCACCGCGGCCTCTCCCGTCAGCCC TTGGATCCGGAGCTCGAAGACATGGACTCGCGCGACGACGGCCGCGACATGTCTTGGTCGCCGACCTGCCGTGAC GCCCTCGATGCCTCCTCCTCAGCTGCCCTGTGCGACTCGCGGCGACGGCCACCGCGGCTGGGCCCGCCTCGAGTC ACGTCCGCCTCGCCTGGCGGGAGGATGA |