© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1642 |
| Gene name | |
| Location | Contig_137:31281..32948 |
| Strand | + |
| Gene length (bp) | 1667 |
| Transcript length (bp) | 1452 |
| Coding sequence length (bp) | 1452 |
| Protein length (aa) | 484 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13127 | DUF3955 | Protein of unknown function (DUF3955) | 3.3E-08 | 71 | 125 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 68 | 478 | 2.0E-73 |
| sp|O94654|YGF3_SCHPO | Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1 | 61 | 452 | 7.0E-56 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 50 | 452 | 3.0E-48 |
| sp|A6QL92|S35F5_BOVIN | Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1 | 208 | 449 | 1.0E-44 |
| sp|Q4R794|S35F5_MACFA | Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1 | 208 | 451 | 9.0E-44 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 68 | 478 | 2.0E-73 |
| sp|O94654|YGF3_SCHPO | Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1 | 61 | 452 | 7.0E-56 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 50 | 452 | 3.0E-48 |
| sp|A6QL92|S35F5_BOVIN | Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1 | 208 | 449 | 1.0E-44 |
| sp|Q4R794|S35F5_MACFA | Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1 | 208 | 451 | 9.0E-44 |
| sp|Q5R6J3|S35F5_PONAB | Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1 | 208 | 452 | 2.0E-43 |
| sp|Q8WV83|S35F5_HUMAN | Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1 | 208 | 452 | 1.0E-42 |
| sp|Q04083|THI74_YEAST | Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1 | 82 | 480 | 1.0E-40 |
| sp|Q8IY50|S35F3_HUMAN | Putative thiamine transporter SLC35F3 OS=Homo sapiens GN=SLC35F3 PE=2 SV=2 | 221 | 444 | 4.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 93 | 22 |
| 2 | 103 | 125 | 22 |
| 3 | 272 | 290 | 18 |
| 4 | 305 | 327 | 22 |
| 5 | 344 | 366 | 22 |
| 6 | 398 | 420 | 22 |
| 7 | 432 | 451 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1642 MPTPTPPPPDSPGSASSVRRPSDATAGPVSERLRRSSAVLTASPFQRLTLSSEKEGFRSKMGLAGVARRTLGIGL LLVTVFLWTTSNFLASFIFSDHTYDKPFFLVYVNSSVFAVALLPVFVRYMRRSGIRGLRHDVVRLWHEHRRQASM LAKLPSAAVTGREAEEELAGTGAGTARERLLLNADGADDDDDDDGGSIDLGQRAPDEKLGFRETAGLSLEFCMLW TLANYFASACLEHTSVASVTILTSTSSMWTLVFCAVYGVEAFSVRKLVGVMASLVGVALISTVDLSGESDENRGS FPHKTPGQIAVGDAMALFSAVVYGMYVTVMKRRVGSEDRVDMRLFFGLVGVFNLALLWPLFFVLHWTGIEPFEMP PTGKVWAVIIANSLASFVSDMSWAMAMLLTTPLVVTVGLSLTIPLSLVGEMIQYGQYSSFIYWIGAAVVFVSFLF INNESYEDGGPGRRRGSEDGSADAAAARAGAAA* |
| Coding | >Hirsu2|1642 ATGCCGACGCCGACGCCGCCGCCGCCGGATTCGCCGGGATCGGCTTCGAGTGTGAGGCGGCCCAGCGACGCCACC GCCGGACCCGTATCAGAACGTCTCCGACGCTCCTCGGCCGTCTTGACGGCATCGCCCTTCCAGAGGCTGACCCTG TCCTCGGAAAAGGAGGGATTCCGGTCCAAGATGGGCCTGGCCGGCGTTGCCAGGCGGACGCTCGGGATCGGTCTC TTGCTCGTGACCGTCTTCCTGTGGACCACGTCCAACTTCCTCGCTAGCTTCATCTTCTCCGACCACACCTACGAC AAGCCTTTCTTCCTCGTCTACGTCAACTCGTCCGTCTTCGCCGTCGCGTTGCTGCCCGTCTTCGTCCGATACATG CGGAGGAGCGGCATCCGTGGCCTCCGCCACGACGTCGTGCGCCTATGGCACGAGCACAGACGACAGGCGAGCATG CTTGCCAAGCTCCCCTCGGCGGCCGTGACGGGCCGGGAAGCGGAGGAGGAGTTGGCGGGGACGGGGGCGGGGACG GCGCGCGAGCGCTTGCTGTTGAACGCTGACGGCGCCGACGATGACGACGACGATGACGGCGGCAGTATCGACCTG GGCCAGCGAGCGCCGGACGAGAAATTGGGCTTCCGAGAGACGGCCGGGCTGAGCCTCGAGTTCTGCATGCTGTGG ACGCTGGCCAACTACTTTGCGTCGGCCTGCCTGGAGCACACGAGCGTGGCGAGCGTGACGATCCTGACGTCGACG AGCAGCATGTGGACGCTCGTCTTCTGCGCCGTCTACGGCGTCGAGGCCTTTTCGGTGCGCAAGCTGGTGGGCGTC ATGGCGTCGCTGGTCGGCGTCGCCCTCATCTCGACCGTCGACCTGTCGGGCGAGAGCGACGAGAACCGCGGCTCG TTCCCGCACAAGACGCCCGGGCAGATCGCCGTGGGCGACGCCATGGCCCTCTTCAGCGCCGTCGTCTACGGCATG TACGTGACGGTGATGAAGAGGCGGGTCGGCAGCGAGGACCGGGTCGACATGCGCCTGTTCTTCGGCCTCGTCGGC GTCTTCAACCTGGCCCTGCTGTGGCCGCTGTTCTTCGTCCTGCACTGGACCGGCATCGAACCGTTCGAGATGCCG CCGACGGGCAAGGTTTGGGCCGTGATTATCGCCAACTCGCTGGCGTCGTTCGTCAGCGACATGTCGTGGGCGATG GCGATGCTGCTGACGACGCCGCTGGTGGTGACGGTGGGCCTGTCGCTGACGATACCGCTGTCGCTGGTGGGCGAG ATGATCCAGTACGGGCAGTACTCTAGCTTCATCTACTGGATCGGGGCCGCCGTCGTCTTCGTCTCCTTTCTCTTC ATCAACAACGAGAGCTACGAGGACGGCGGGCCGGGCAGGAGGCGAGGCAGCGAGGACGGCAGCGCCGATGCAGCA GCCGCCCGTGCCGGAGCTGCTGCCTAG |
| Transcript | >Hirsu2|1642 ATGCCGACGCCGACGCCGCCGCCGCCGGATTCGCCGGGATCGGCTTCGAGTGTGAGGCGGCCCAGCGACGCCACC GCCGGACCCGTATCAGAACGTCTCCGACGCTCCTCGGCCGTCTTGACGGCATCGCCCTTCCAGAGGCTGACCCTG TCCTCGGAAAAGGAGGGATTCCGGTCCAAGATGGGCCTGGCCGGCGTTGCCAGGCGGACGCTCGGGATCGGTCTC TTGCTCGTGACCGTCTTCCTGTGGACCACGTCCAACTTCCTCGCTAGCTTCATCTTCTCCGACCACACCTACGAC AAGCCTTTCTTCCTCGTCTACGTCAACTCGTCCGTCTTCGCCGTCGCGTTGCTGCCCGTCTTCGTCCGATACATG CGGAGGAGCGGCATCCGTGGCCTCCGCCACGACGTCGTGCGCCTATGGCACGAGCACAGACGACAGGCGAGCATG CTTGCCAAGCTCCCCTCGGCGGCCGTGACGGGCCGGGAAGCGGAGGAGGAGTTGGCGGGGACGGGGGCGGGGACG GCGCGCGAGCGCTTGCTGTTGAACGCTGACGGCGCCGACGATGACGACGACGATGACGGCGGCAGTATCGACCTG GGCCAGCGAGCGCCGGACGAGAAATTGGGCTTCCGAGAGACGGCCGGGCTGAGCCTCGAGTTCTGCATGCTGTGG ACGCTGGCCAACTACTTTGCGTCGGCCTGCCTGGAGCACACGAGCGTGGCGAGCGTGACGATCCTGACGTCGACG AGCAGCATGTGGACGCTCGTCTTCTGCGCCGTCTACGGCGTCGAGGCCTTTTCGGTGCGCAAGCTGGTGGGCGTC ATGGCGTCGCTGGTCGGCGTCGCCCTCATCTCGACCGTCGACCTGTCGGGCGAGAGCGACGAGAACCGCGGCTCG TTCCCGCACAAGACGCCCGGGCAGATCGCCGTGGGCGACGCCATGGCCCTCTTCAGCGCCGTCGTCTACGGCATG TACGTGACGGTGATGAAGAGGCGGGTCGGCAGCGAGGACCGGGTCGACATGCGCCTGTTCTTCGGCCTCGTCGGC GTCTTCAACCTGGCCCTGCTGTGGCCGCTGTTCTTCGTCCTGCACTGGACCGGCATCGAACCGTTCGAGATGCCG CCGACGGGCAAGGTTTGGGCCGTGATTATCGCCAACTCGCTGGCGTCGTTCGTCAGCGACATGTCGTGGGCGATG GCGATGCTGCTGACGACGCCGCTGGTGGTGACGGTGGGCCTGTCGCTGACGATACCGCTGTCGCTGGTGGGCGAG ATGATCCAGTACGGGCAGTACTCTAGCTTCATCTACTGGATCGGGGCCGCCGTCGTCTTCGTCTCCTTTCTCTTC ATCAACAACGAGAGCTACGAGGACGGCGGGCCGGGCAGGAGGCGAGGCAGCGAGGACGGCAGCGCCGATGCAGCA GCCGCCCGTGCCGGAGCTGCTGCCTAG |
| Gene | >Hirsu2|1642 ATGCCGACGCCGACGCCGCCGCCGCCGGATTCGCCGGGATCGGCTTCGAGTGTGAGGCGGCCCAGCGACGCCACC GCCGGACCCGTATCAGAACGTCTCCGACGCTCCTCGGCCGTCTTGACGGCATCGCCCTTCCAGAGGCTGACCCTG TCCTCGGAAAAGGAGGGATTCCGGTCCAAGATGGGCCTGGCCGGCGTTGCCAGGCGGACGCTCGGGATCGGTCTC TTGCTCGTGACCGTCTTCCTGTGGACCACGTCCAACTTCCTCGCTAGCGTACGTGACCCCCCGCGTGTGCTCTTT TTTATTCTCCTGGCCGGGGAGAGCGGAGGACAGGCGGTATTGGGCTGGGACTGAGGCGGGCGAGACGCAGTTCAT CTTCTCCGACCACACCTACGACAAGCCTTTCTTCCTCGTCTACGTCAACTCGTCCGTCTTCGCCGTCGCGTTGCT GCCCGTCTTCGTCCGATACATGCGGAGGAGCGGCATCCGTGGCCTCCGCCACGACGTCGTGCGCCTATGGCACGA GCACAGACGACAGGCGAGCATGCTTGCCAAGCTCCCCTCGGCGGCCGTGACGGGCCGGGAAGCGGAGGAGGAGTT GGCGGGGACGGGGGCGGGGACGGCGCGCGAGCGCTTGCTGTTGAACGCTGACGGCGCCGACGATGACGACGACGA TGACGGCGGCAGTATCGACCTGGGCCAGCGAGCGCCGGACGAGAAATTGGGCTTCCGAGAGACGGCCGGGCTGAG CCTCGAGTTCTGCATGCTGTGGACGCTGGCCAACTACTTTGCGTCGGCCTGCCTGGAGCACACGAGCGTGGCGAG CGTGACGATCCTGACGTCGACGAGCAGCATGTGGACGCTCGTCTTCTGCGCCGTCTACGGCGTCGAGGCCTTTTC GGTGCGCAAGCTGGTGGGCGTCATGGCGTCGCTGGTCGGCGTCGCCCTCATCTCGACCGTCGACCTGTCGGGCGA GAGCGACGAGAACCGCGGCTCGTTCCCGCACAAGACGCCCGGGCAGATCGCCGTGGGCGACGCCATGGCCCTCTT CAGCGCCGTCGTCTACGGCATGTACGTGACGGTGATGAAGAGGCGGGTCGGCAGCGAGGACCGGGTCGACATGCG CCTGTTCTTCGGCCTCGTCGGCGTCTTCAACCTGGCCCTGCTGTGGCCGCTGTTCTTCGTCCTGCACTGGACCGG CATCGAACCGGTATGTCGCGTGGGACACTGGAGCGGCAGGCGGATGGACTTGCTGACCCGACGCGACGCCAGTTC GAGATGCCGCCGACGGGCAAGGTTTGGGCCGTGATTATCGTACGTGCCCCCGACCGGACAGTGTGGCATCCGGGT CTGTCGCTGACCGGGAGCAGGCCAACTCGCTGGCGTCGTTCGTCAGCGACATGTCGTGGGCGATGGCGATGCTGC TGACGACGCCGCTGGTGGTGACGGTGGGCCTGTCGCTGACGATACCGCTGTCGCTGGTGGGCGAGATGATCCAGT ACGGGCAGTACTCTAGCTTCATCTACTGGATCGGGGCCGCCGTCGTCTTCGTCTCCTTTCTCTTCATCAACAACG AGAGCTACGAGGACGGCGGGCCGGGCAGGAGGCGAGGCAGCGAGGACGGCAGCGCCGATGCAGCAGCCGCCCGTG CCGGAGCTGCTGCCTAG |