Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1635
Gene name
Location	Contig_137:10829..11636
Strand	+
Gene length (bp)	807
Transcript length (bp)	807
Coding sequence length (bp)	807
Protein length (aa)	269

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18142	SLATT_fungal	SMODS and SLOG-associating 2TM effector domain	3.8E-31	102	219

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	116	138	22
2	143	165	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1635 MSEIIRRSSRWILERCISALDREEQGFPPQNSNYDAGITDNGTTTPAPPRSLTVVTTDAAALIPSNDKLLIYRSL TGIDTVPALTSAGHAQRAAPNLGIYPRAVNAERSAARSYRFFNVAVNACLGLQIIVAASLTALGAANGSRAAVTG FGAINTIVAGILTYLKGSGLPNRLKYVEDEFKLVREYAEQREREFCLAGCPLDPLHEVQTVEDMYRAAKLQMQNQ KTPGAGGGGGGQPPRVSSMALSSLAQRFSRMTDTTHVPPPEKH*
Coding	>Hirsu2\|1635 ATGAGTGAGATTATCAGACGCTCCTCTCGCTGGATCCTCGAGCGCTGCATATCGGCGCTTGACCGGGAAGAACAA GGCTTCCCCCCGCAAAACAGCAACTATGATGCGGGCATCACAGACAACGGCACGACGACGCCAGCACCGCCCCGA TCGCTGACCGTCGTCACGACCGACGCCGCCGCCCTCATCCCCTCCAACGACAAGCTCCTCATCTATCGCTCCCTC ACGGGCATCGACACCGTCCCGGCCCTCACGAGCGCCGGCCACGCCCAGCGCGCGGCGCCCAACCTCGGCATCTAC CCTCGCGCCGTCAACGCCGAGCGCTCCGCCGCCCGCAGCTACCGCTTCTTCAACGTGGCCGTCAACGCCTGCCTC GGCCTGCAGATCATCGTCGCCGCGTCGCTGACGGCCCTCGGCGCCGCCAACGGCTCCCGCGCCGCCGTCACGGGC TTTGGCGCCATCAACACCATCGTCGCCGGCATCCTGACCTACCTCAAGGGCTCCGGCTTGCCGAACCGCCTCAAG TACGTCGAGGACGAGTTCAAGCTGGTGAGGGAGTATGCGGAGCAGCGCGAGAGGGAGTTTTGTCTCGCTGGCTGT CCGCTCGATCCGCTGCACGAGGTTCAGACCGTCGAGGACATGTACAGGGCCGCCAAGCTGCAGATGCAAAACCAG AAGACTCCCGGCGCAGGCGGCGGCGGCGGCGGACAGCCTCCGCGCGTCTCGTCCATGGCTTTGTCGTCGTTGGCG CAACGCTTCTCCCGAATGACTGACACGACGCATGTGCCTCCGCCGGAGAAGCACTAG
Transcript	>Hirsu2\|1635 ATGAGTGAGATTATCAGACGCTCCTCTCGCTGGATCCTCGAGCGCTGCATATCGGCGCTTGACCGGGAAGAACAA GGCTTCCCCCCGCAAAACAGCAACTATGATGCGGGCATCACAGACAACGGCACGACGACGCCAGCACCGCCCCGA TCGCTGACCGTCGTCACGACCGACGCCGCCGCCCTCATCCCCTCCAACGACAAGCTCCTCATCTATCGCTCCCTC ACGGGCATCGACACCGTCCCGGCCCTCACGAGCGCCGGCCACGCCCAGCGCGCGGCGCCCAACCTCGGCATCTAC CCTCGCGCCGTCAACGCCGAGCGCTCCGCCGCCCGCAGCTACCGCTTCTTCAACGTGGCCGTCAACGCCTGCCTC GGCCTGCAGATCATCGTCGCCGCGTCGCTGACGGCCCTCGGCGCCGCCAACGGCTCCCGCGCCGCCGTCACGGGC TTTGGCGCCATCAACACCATCGTCGCCGGCATCCTGACCTACCTCAAGGGCTCCGGCTTGCCGAACCGCCTCAAG TACGTCGAGGACGAGTTCAAGCTGGTGAGGGAGTATGCGGAGCAGCGCGAGAGGGAGTTTTGTCTCGCTGGCTGT CCGCTCGATCCGCTGCACGAGGTTCAGACCGTCGAGGACATGTACAGGGCCGCCAAGCTGCAGATGCAAAACCAG AAGACTCCCGGCGCAGGCGGCGGCGGCGGCGGACAGCCTCCGCGCGTCTCGTCCATGGCTTTGTCGTCGTTGGCG CAACGCTTCTCCCGAATGACTGACACGACGCATGTGCCTCCGCCGGAGAAGCACTAG
Gene	>Hirsu2\|1635 ATGAGTGAGATTATCAGACGCTCCTCTCGCTGGATCCTCGAGCGCTGCATATCGGCGCTTGACCGGGAAGAACAA GGCTTCCCCCCGCAAAACAGCAACTATGATGCGGGCATCACAGACAACGGCACGACGACGCCAGCACCGCCCCGA TCGCTGACCGTCGTCACGACCGACGCCGCCGCCCTCATCCCCTCCAACGACAAGCTCCTCATCTATCGCTCCCTC ACGGGCATCGACACCGTCCCGGCCCTCACGAGCGCCGGCCACGCCCAGCGCGCGGCGCCCAACCTCGGCATCTAC CCTCGCGCCGTCAACGCCGAGCGCTCCGCCGCCCGCAGCTACCGCTTCTTCAACGTGGCCGTCAACGCCTGCCTC GGCCTGCAGATCATCGTCGCCGCGTCGCTGACGGCCCTCGGCGCCGCCAACGGCTCCCGCGCCGCCGTCACGGGC TTTGGCGCCATCAACACCATCGTCGCCGGCATCCTGACCTACCTCAAGGGCTCCGGCTTGCCGAACCGCCTCAAG TACGTCGAGGACGAGTTCAAGCTGGTGAGGGAGTATGCGGAGCAGCGCGAGAGGGAGTTTTGTCTCGCTGGCTGT CCGCTCGATCCGCTGCACGAGGTTCAGACCGTCGAGGACATGTACAGGGCCGCCAAGCTGCAGATGCAAAACCAG AAGACTCCCGGCGCAGGCGGCGGCGGCGGCGGACAGCCTCCGCGCGTCTCGTCCATGGCTTTGTCGTCGTTGGCG CAACGCTTCTCCCGAATGACTGACACGACGCATGTGCCTCCGCCGGAGAAGCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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