© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1634 |
| Gene name | |
| Location | Contig_137:4720..6916 |
| Strand | - |
| Gene length (bp) | 2196 |
| Transcript length (bp) | 1863 |
| Coding sequence length (bp) | 1863 |
| Protein length (aa) | 621 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 2.3E-14 | 147 | 412 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0VD19|ASM_BOVIN | Sphingomyelin phosphodiesterase OS=Bos taurus GN=SMPD1 PE=2 SV=1 | 152 | 558 | 2.0E-61 |
| sp|Q04519|ASM_MOUSE | Sphingomyelin phosphodiesterase OS=Mus musculus GN=Smpd1 PE=2 SV=2 | 152 | 558 | 3.0E-61 |
| sp|P17405|ASM_HUMAN | Sphingomyelin phosphodiesterase OS=Homo sapiens GN=SMPD1 PE=1 SV=4 | 147 | 558 | 9.0E-61 |
| sp|Q23498|ASM2_CAEEL | Sphingomyelin phosphodiesterase 2 OS=Caenorhabditis elegans GN=asm-2 PE=1 SV=3 | 44 | 567 | 2.0E-60 |
| sp|Q54C16|SGMB_DICDI | Sphingomyelin phosphodiesterase B OS=Dictyostelium discoideum GN=sgmB PE=3 SV=1 | 41 | 556 | 9.0E-60 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0VD19|ASM_BOVIN | Sphingomyelin phosphodiesterase OS=Bos taurus GN=SMPD1 PE=2 SV=1 | 152 | 558 | 2.0E-61 |
| sp|Q04519|ASM_MOUSE | Sphingomyelin phosphodiesterase OS=Mus musculus GN=Smpd1 PE=2 SV=2 | 152 | 558 | 3.0E-61 |
| sp|P17405|ASM_HUMAN | Sphingomyelin phosphodiesterase OS=Homo sapiens GN=SMPD1 PE=1 SV=4 | 147 | 558 | 9.0E-61 |
| sp|Q23498|ASM2_CAEEL | Sphingomyelin phosphodiesterase 2 OS=Caenorhabditis elegans GN=asm-2 PE=1 SV=3 | 44 | 567 | 2.0E-60 |
| sp|Q54C16|SGMB_DICDI | Sphingomyelin phosphodiesterase B OS=Dictyostelium discoideum GN=sgmB PE=3 SV=1 | 41 | 556 | 9.0E-60 |
| sp|Q10916|ASM1_CAEEL | Sphingomyelin phosphodiesterase 1 OS=Caenorhabditis elegans GN=asm-1 PE=1 SV=2 | 77 | 556 | 1.0E-59 |
| sp|Q9UAY4|ASM3_CAEEL | Putative sphingomyelin phosphodiesterase asm-3 OS=Caenorhabditis elegans GN=asm-3 PE=3 SV=2 | 112 | 568 | 2.0E-54 |
| sp|Q55C09|SGMA_DICDI | Sphingomyelin phosphodiesterase A OS=Dictyostelium discoideum GN=sgmA PE=3 SV=1 | 44 | 564 | 3.0E-46 |
| sp|Q641Z7|ASM3A_RAT | Acid sphingomyelinase-like phosphodiesterase 3a OS=Rattus norvegicus GN=Smpdl3a PE=2 SV=1 | 147 | 553 | 3.0E-43 |
| sp|Q92485|ASM3B_HUMAN | Acid sphingomyelinase-like phosphodiesterase 3b OS=Homo sapiens GN=SMPDL3B PE=2 SV=2 | 144 | 554 | 2.0E-42 |
| sp|P70158|ASM3A_MOUSE | Acid sphingomyelinase-like phosphodiesterase 3a OS=Mus musculus GN=Smpdl3a PE=1 SV=2 | 132 | 562 | 4.0E-40 |
| sp|P58242|ASM3B_MOUSE | Acid sphingomyelinase-like phosphodiesterase 3b OS=Mus musculus GN=Smpdl3b PE=1 SV=1 | 137 | 554 | 5.0E-37 |
| sp|Q92484|ASM3A_HUMAN | Acid sphingomyelinase-like phosphodiesterase 3a OS=Homo sapiens GN=SMPDL3A PE=1 SV=2 | 147 | 553 | 1.0E-36 |
| sp|Q3ZC91|ASM3A_BOVIN | Acid sphingomyelinase-like phosphodiesterase 3a OS=Bos taurus GN=SMPDL3A PE=2 SV=1 | 132 | 553 | 1.0E-34 |
| sp|Q54SR8|SGMC_DICDI | Sphingomyelinase phosphodiesterase C OS=Dictyostelium discoideum GN=sgmC PE=3 SV=1 | 147 | 554 | 5.0E-30 |
| sp|Q55GC7|SGMD_DICDI | Sphingomyelinase phosphodiesterase D OS=Dictyostelium discoideum GN=sgmD PE=3 SV=1 | 147 | 545 | 9.0E-23 |
| sp|Q5KH67|PPN1_CRYNJ | Endopolyphosphatase OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PPN1 PE=3 SV=1 | 139 | 414 | 4.0E-11 |
| sp|Q9P3S1|PPN1_NEUCR | Endopolyphosphatase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=epp-1 PE=3 SV=3 | 134 | 417 | 8.0E-11 |
| sp|Q756F2|PPN1_ASHGO | Endopolyphosphatase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PPN1 PE=3 SV=2 | 147 | 414 | 2.0E-09 |
| sp|Q6FMQ0|PPN1_CANGA | Endopolyphosphatase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PPN1 PE=3 SV=1 | 133 | 414 | 2.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1634 MRPILLFPLFGSLAFGADDSPAGAPDAGAPDAQERFAALTANPLTCDICQTAVGALRVLADKGDGVFVESVSAFG EICEGLVTLEGPALANRVRKMRPDSVSIRLFCNSFFGACVSPPVEEWKVPFPSEAPPRAARPRRTSGRKPIKFVQ YSDLHVDPLYKTGSNAECSNPILCCREDSSGPNETRAGPFGHIRRCDTPFALEESMYRAIEKVAPDAAFTIFTGD IVERALWQTTQPSNQDRIVWAYGNMSRYFDLVYGVVGNHEQSPVNLFPLQEPAPAGQGAQWLYRTLSREWGRWTG RRAAEQARALGHYSVKYPHGNLRIISLNTNYYYRDNFWVYEDPLERDPMGQFAWLVGELDAAERAAENVYIIGHL PMGDQDAFHHTSNYFDQIVRRYAATIAAMFFGHTHVDEFELHYADYAHRSARNALVTSYICPSVTPSDGMPAFRV YEVDPDTFAVLDVVTYRTDMEDAAFQAGPRWTKYYSAKEAYGPAVRPPVRDPRLELTPAFWHGLTEEMDRDQRLF DSYYRRKSRGWNAEPCTGQCKKTEICQLRAGRSQDNCRGDVLGFHFKRDDAGHPPGPQHAHHSCGSTVGTQTLRA LKYPHMRAKLLEIVREKTLA* |
| Coding | >Hirsu2|1634 ATGCGGCCGATCCTCTTGTTCCCGCTCTTCGGCTCGCTCGCCTTCGGCGCCGACGACTCGCCCGCCGGCGCACCG GACGCCGGCGCTCCGGACGCGCAAGAGAGATTCGCCGCGCTGACGGCGAACCCCCTGACATGCGACATCTGCCAG ACGGCTGTCGGGGCGCTGAGGGTGCTCGCGGACAAGGGCGACGGCGTCTTCGTTGAGTCCGTCAGCGCCTTTGGG GAGATATGTGAGGGCCTCGTGACGCTCGAGGGCCCGGCGCTGGCCAACCGCGTGCGCAAGATGCGGCCCGACTCG GTCTCGATCCGGCTCTTCTGCAACAGCTTCTTCGGCGCCTGCGTCAGCCCGCCCGTGGAGGAGTGGAAGGTGCCG TTCCCGTCCGAGGCGCCGCCGCGCGCCGCCCGACCGCGGCGGACAAGCGGCCGGAAGCCCATCAAGTTCGTCCAG TACTCGGACCTGCACGTCGATCCGCTCTACAAGACGGGCTCCAACGCCGAGTGCTCGAACCCCATCCTTTGCTGC CGAGAGGACTCGTCGGGGCCCAACGAGACGCGCGCCGGGCCCTTCGGACACATCCGGCGGTGCGACACGCCGTTC GCGCTTGAGGAGAGCATGTACCGGGCAATAGAGAAGGTCGCGCCGGACGCGGCCTTCACCATCTTCACGGGCGAC ATCGTCGAGCGCGCGCTCTGGCAGACGACGCAGCCGTCGAACCAAGACCGAATCGTCTGGGCCTACGGCAACATG AGCAGGTATTTCGACCTCGTGTACGGCGTCGTCGGCAACCACGAGCAGAGCCCGGTCAACCTGTTCCCGTTGCAG GAGCCGGCGCCGGCGGGCCAGGGGGCGCAGTGGCTGTACCGCACGCTGTCCCGCGAGTGGGGCCGGTGGACGGGC CGGCGGGCGGCGGAGCAGGCCCGGGCGCTGGGCCACTACTCGGTCAAGTACCCGCACGGCAACCTGCGCATCATC TCGCTCAACACCAACTACTACTACCGCGACAACTTCTGGGTCTACGAGGACCCGCTCGAGCGCGACCCCATGGGC CAGTTCGCCTGGCTGGTGGGCGAGCTGGACGCGGCCGAGCGGGCGGCCGAGAACGTCTATATCATCGGCCATCTG CCGATGGGCGACCAGGACGCCTTCCACCACACCTCCAACTACTTCGACCAGATCGTGCGCCGGTACGCCGCCACC ATCGCCGCCATGTTCTTCGGCCACACGCACGTCGACGAGTTCGAGCTGCACTACGCCGACTACGCCCACCGCTCC GCCCGCAACGCCCTCGTCACCTCGTACATCTGCCCGTCCGTCACGCCGTCGGACGGCATGCCGGCCTTCCGCGTC TACGAGGTCGACCCGGACACCTTCGCCGTCCTCGACGTCGTCACCTACCGCACCGACATGGAGGACGCCGCCTTC CAGGCCGGGCCCCGCTGGACCAAGTACTACTCGGCCAAGGAGGCGTACGGGCCGGCCGTGCGGCCGCCCGTCCGG GACCCCCGGCTCGAGCTGACGCCCGCCTTTTGGCACGGCCTGACCGAGGAGATGGACCGTGACCAGCGCCTCTTC GACTCGTACTACCGCCGCAAGAGCCGCGGCTGGAACGCCGAGCCCTGCACCGGCCAGTGCAAGAAGACCGAGATC TGCCAGTTGCGCGCCGGCCGGAGCCAGGACAACTGCCGCGGCGACGTGCTGGGCTTCCACTTCAAGCGCGACGAC GCCGGCCACCCGCCCGGGCCCCAGCACGCCCACCATTCCTGCGGTTCCACCGTCGGCACGCAGACGCTGAGGGCC CTGAAGTACCCGCATATGCGCGCCAAGCTCCTTGAGATTGTGCGGGAGAAGACTCTGGCCTGA |
| Transcript | >Hirsu2|1634 ATGCGGCCGATCCTCTTGTTCCCGCTCTTCGGCTCGCTCGCCTTCGGCGCCGACGACTCGCCCGCCGGCGCACCG GACGCCGGCGCTCCGGACGCGCAAGAGAGATTCGCCGCGCTGACGGCGAACCCCCTGACATGCGACATCTGCCAG ACGGCTGTCGGGGCGCTGAGGGTGCTCGCGGACAAGGGCGACGGCGTCTTCGTTGAGTCCGTCAGCGCCTTTGGG GAGATATGTGAGGGCCTCGTGACGCTCGAGGGCCCGGCGCTGGCCAACCGCGTGCGCAAGATGCGGCCCGACTCG GTCTCGATCCGGCTCTTCTGCAACAGCTTCTTCGGCGCCTGCGTCAGCCCGCCCGTGGAGGAGTGGAAGGTGCCG TTCCCGTCCGAGGCGCCGCCGCGCGCCGCCCGACCGCGGCGGACAAGCGGCCGGAAGCCCATCAAGTTCGTCCAG TACTCGGACCTGCACGTCGATCCGCTCTACAAGACGGGCTCCAACGCCGAGTGCTCGAACCCCATCCTTTGCTGC CGAGAGGACTCGTCGGGGCCCAACGAGACGCGCGCCGGGCCCTTCGGACACATCCGGCGGTGCGACACGCCGTTC GCGCTTGAGGAGAGCATGTACCGGGCAATAGAGAAGGTCGCGCCGGACGCGGCCTTCACCATCTTCACGGGCGAC ATCGTCGAGCGCGCGCTCTGGCAGACGACGCAGCCGTCGAACCAAGACCGAATCGTCTGGGCCTACGGCAACATG AGCAGGTATTTCGACCTCGTGTACGGCGTCGTCGGCAACCACGAGCAGAGCCCGGTCAACCTGTTCCCGTTGCAG GAGCCGGCGCCGGCGGGCCAGGGGGCGCAGTGGCTGTACCGCACGCTGTCCCGCGAGTGGGGCCGGTGGACGGGC CGGCGGGCGGCGGAGCAGGCCCGGGCGCTGGGCCACTACTCGGTCAAGTACCCGCACGGCAACCTGCGCATCATC TCGCTCAACACCAACTACTACTACCGCGACAACTTCTGGGTCTACGAGGACCCGCTCGAGCGCGACCCCATGGGC CAGTTCGCCTGGCTGGTGGGCGAGCTGGACGCGGCCGAGCGGGCGGCCGAGAACGTCTATATCATCGGCCATCTG CCGATGGGCGACCAGGACGCCTTCCACCACACCTCCAACTACTTCGACCAGATCGTGCGCCGGTACGCCGCCACC ATCGCCGCCATGTTCTTCGGCCACACGCACGTCGACGAGTTCGAGCTGCACTACGCCGACTACGCCCACCGCTCC GCCCGCAACGCCCTCGTCACCTCGTACATCTGCCCGTCCGTCACGCCGTCGGACGGCATGCCGGCCTTCCGCGTC TACGAGGTCGACCCGGACACCTTCGCCGTCCTCGACGTCGTCACCTACCGCACCGACATGGAGGACGCCGCCTTC CAGGCCGGGCCCCGCTGGACCAAGTACTACTCGGCCAAGGAGGCGTACGGGCCGGCCGTGCGGCCGCCCGTCCGG GACCCCCGGCTCGAGCTGACGCCCGCCTTTTGGCACGGCCTGACCGAGGAGATGGACCGTGACCAGCGCCTCTTC GACTCGTACTACCGCCGCAAGAGCCGCGGCTGGAACGCCGAGCCCTGCACCGGCCAGTGCAAGAAGACCGAGATC TGCCAGTTGCGCGCCGGCCGGAGCCAGGACAACTGCCGCGGCGACGTGCTGGGCTTCCACTTCAAGCGCGACGAC GCCGGCCACCCGCCCGGGCCCCAGCACGCCCACCATTCCTGCGGTTCCACCGTCGGCACGCAGACGCTGAGGGCC CTGAAGTACCCGCATATGCGCGCCAAGCTCCTTGAGATTGTGCGGGAGAAGACTCTGGCCTGA |
| Gene | >Hirsu2|1634 ATGCGGCCGATCCTCTTGTTCCCGCTCTTCGGCTCGCTCGCCTTCGGCGCCGACGACTCGCCCGCCGGCGCACCG GACGCCGGCGCTCCGGACGCGCAAGAGAGATTCGCCGCGCTGACGGCGAACCCCCTGACATGCGACATCTGCCAG GTAAGCCGCGAGCGCGTCACGGGCCAGGCTCCCACGACCGCTGACCGCGGCGCAGACGGCTGTCGGGGCGCTGAG GGTGCTCGCGGACAAGGGCGACGGCGTCTTCGTTGAGTCCGTCGTACGACTGTGCAGGTCGTTCTTTCAGGATGT CTGTCCATCCCTTCCCCCCCTGTGACTGGAGACCTCGCGAGGCCCTTGAAACTTACCGTCGTCCGCCAGAGCGCC TTTGGGGAGATATGTGAGGGCCTCGTGACGCTCGAGGGCCCGGCGCTGGCCAACCGCGTGCGCAAGATGCGGCCC GACTCGGTCTCGATCCGGCTCTTCTGCAACAGCTTCTTCGGCGCCTGCGTCAGCCCGCCCGTGGAGGAGTGGAAG GTGCCGTTCCCGTCCGAGGCGCCGCCGCGCGCCGCCCGACCGCGGCGGACAAGCGGCCGGAAGCCCATCAAGTTC GTCCAGTACTCGGACCTGCACGTCGATCCGCTCTACAAGACGGGCTCCAACGCCGAGTGCTCGAACCCCATCCTT TGCTGCCGGTGCGTGCTCGCTTTTGTCCCAGGGGCCCGCGATGCTGGGCATCACGGGCCGGCGCGGCGGGTGAGA GAGCTGATCCGAGATCGGCAGAGAGGACTCGTCGGGGCCCAACGAGACGCGCGCCGGGCCCTTCGGACACATCCG GCGGTGCGACACGCCGTTCGCGCTTGAGGAGAGCATGTACCGGGCAATAGAGAAGGTCGCGCCGGACGCGGCCTT CACCATCTTCACGGGCGACATCGTCGAGCGCGCGCTCTGGCAGACGACGCAGCCGTCGAACCAAGACCGAAGTAC GTCTTTCCCCCATCCCCGACCGTCTCTTCTGGCCGAGATGATGGCTGAGACCCGAGGTGCGCCGCGCCAAACAAC GAAAAAACAGTCGTCTGGGCCTACGGCAACATGAGCAGGTATTTCGACCTCGTGTACGGCGTCGTCGGCAACCAC GAGCAGAGCCCGGTCAACCTGTTCCCGTTGCAGGAGCCGGCGCCGGCGGGCCAGGGGGCGCAGTGGCTGTACCGC ACGCTGTCCCGCGAGTGGGGCCGGTGGACGGGCCGGCGGGCGGCGGAGCAGGCCCGGGCGCTGGGCCACTACTCG GTCAAGTACCCGCACGGCAACCTGCGCATCATCTCGCTCAACACCAACTACTACTACCGCGACAACTTCTGGGTC TACGAGGACCCGCTCGAGCGCGACCCCATGGGCCAGTTCGCCTGGCTGGTGGGCGAGCTGGACGCGGCCGAGCGG GCGGCCGAGAACGTCTATATCATCGGCCATCTGCCGATGGGCGACCAGGACGCCTTCCACCACACCTCCAACTAC TTCGACCAGATCGTGCGCCGGTACGCCGCCACCATCGCCGCCATGTTCTTCGGCCACACGCACGTCGACGAGTTC GAGCTGCACTACGCCGACTACGCCCACCGCTCCGCCCGCAACGCCCTCGTCACCTCGTACATCTGCCCGTCCGTC ACGCCGTCGGACGGCATGCCGGCCTTCCGCGTCTACGAGGTCGACCCGGACACCTTCGCCGTCCTCGACGTCGTC ACCTACCGCACCGACATGGAGGACGCCGCCTTCCAGGCCGGGCCCCGCTGGACCAAGTACTACTCGGCCAAGGAG GCGTACGGGCCGGCCGTGCGGCCGCCCGTCCGGGACCCCCGGCTCGAGCTGACGCCCGCCTTTTGGCACGGCCTG ACCGAGGAGATGGACCGTGACCAGCGCCTCTTCGACTCGTACTACCGCCGCAAGAGCCGCGGCTGGAACGCCGAG CCCTGCACCGGCCAGTGCAAGAAGACCGAGATCTGCCAGTTGCGCGCCGGCCGGAGCCAGGACAACTGCCGCGGC GACGTGCTGGGCTTCCACTTCAAGCGCGACGACGCCGGCCACCCGCCCGGGCCCCAGCACGCCCACCATTCCTGC GGTTCCACCGTCGGCACGCAGACGCTGAGGGCCCTGAAGTACCCGCATATGCGCGCCAAGCTCCTTGAGATTGTG CGGGAGAAGACTCTGGCCTGA |