© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1613 |
| Gene name | |
| Location | Contig_1361:82..481 |
| Strand | + |
| Gene length (bp) | 399 |
| Transcript length (bp) | 399 |
| Coding sequence length (bp) | 399 |
| Protein length (aa) | 133 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05686 | Glyco_transf_90 | Glycosyl transferase family 90 | 3.4E-11 | 4 | 116 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5K8R6|CXT1_CRYNJ | Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CXT1 PE=1 SV=1 | 8 | 120 | 5.0E-20 |
| sp|Q6UW63|KDEL1_HUMAN | KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1 | 5 | 115 | 1.0E-08 |
| sp|Q9JHP7|KDEL1_MOUSE | KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1 | 5 | 115 | 1.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1613 MDAQYAHKFLPDADGNSFSARFRGFMRSSSLPLKATIYAEWHDDRLAPWLHFVPLDNTFRDLYAVLDYFADGAGG PGDADARFIAEQGQAWANRVLRRDDMRLYVWRLLLEWARLCDDNRHSLAFVDDLAAR* |
| Coding | >Hirsu2|1613 ATGGACGCCCAGTACGCGCACAAGTTCCTGCCGGACGCCGACGGCAACTCCTTCAGCGCCCGCTTCCGCGGCTTC ATGCGCTCCTCCAGCCTGCCGCTCAAGGCCACCATCTACGCCGAGTGGCACGACGACCGCCTCGCGCCCTGGCTG CACTTCGTCCCGCTCGACAACACCTTCCGCGACCTCTACGCCGTCCTCGACTACTTCGCCGACGGCGCCGGCGGG CCCGGCGACGCCGACGCCCGCTTCATCGCCGAGCAGGGCCAGGCCTGGGCCAACCGCGTCCTGCGCCGCGACGAC ATGCGCCTCTACGTCTGGCGCCTGCTGCTCGAGTGGGCTCGCCTCTGCGACGATAACCGCCACTCCCTTGCCTTT GTCGACGACCTCGCCGCCCGCTGA |
| Transcript | >Hirsu2|1613 ATGGACGCCCAGTACGCGCACAAGTTCCTGCCGGACGCCGACGGCAACTCCTTCAGCGCCCGCTTCCGCGGCTTC ATGCGCTCCTCCAGCCTGCCGCTCAAGGCCACCATCTACGCCGAGTGGCACGACGACCGCCTCGCGCCCTGGCTG CACTTCGTCCCGCTCGACAACACCTTCCGCGACCTCTACGCCGTCCTCGACTACTTCGCCGACGGCGCCGGCGGG CCCGGCGACGCCGACGCCCGCTTCATCGCCGAGCAGGGCCAGGCCTGGGCCAACCGCGTCCTGCGCCGCGACGAC ATGCGCCTCTACGTCTGGCGCCTGCTGCTCGAGTGGGCTCGCCTCTGCGACGATAACCGCCACTCCCTTGCCTTT GTCGACGACCTCGCCGCCCGCTGA |
| Gene | >Hirsu2|1613 ATGGACGCCCAGTACGCGCACAAGTTCCTGCCGGACGCCGACGGCAACTCCTTCAGCGCCCGCTTCCGCGGCTTC ATGCGCTCCTCCAGCCTGCCGCTCAAGGCCACCATCTACGCCGAGTGGCACGACGACCGCCTCGCGCCCTGGCTG CACTTCGTCCCGCTCGACAACACCTTCCGCGACCTCTACGCCGTCCTCGACTACTTCGCCGACGGCGCCGGCGGG CCCGGCGACGCCGACGCCCGCTTCATCGCCGAGCAGGGCCAGGCCTGGGCCAACCGCGTCCTGCGCCGCGACGAC ATGCGCCTCTACGTCTGGCGCCTGCTGCTCGAGTGGGCTCGCCTCTGCGACGATAACCGCCACTCCCTTGCCTTT GTCGACGACCTCGCCGCCCGCTGA |