© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1587 |
| Gene name | |
| Location | Contig_1353:5748..7032 |
| Strand | - |
| Gene length (bp) | 1284 |
| Transcript length (bp) | 1284 |
| Coding sequence length (bp) | 1284 |
| Protein length (aa) | 428 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04757 | Pex2_Pex12 | Pex2 / Pex12 amino terminal region | 2.8E-50 | 25 | 278 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8VCP8|PEX12_EMENI | Peroxisome assembly protein 12 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=PEX12 PE=3 SV=1 | 1 | 427 | 6.0E-157 |
| sp|Q01961|PEX12_PICPA | Peroxisome assembly protein 12 OS=Komagataella pastoris GN=PEX12 PE=3 SV=1 | 1 | 427 | 2.0E-44 |
| sp|O00623|PEX12_HUMAN | Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1 | 13 | 383 | 6.0E-31 |
| sp|Q9ET67|PEX12_CRILO | Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1 | 13 | 383 | 1.0E-30 |
| sp|Q8VC48|PEX12_MOUSE | Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1 | 13 | 279 | 6.0E-30 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C8VCP8|PEX12_EMENI | Peroxisome assembly protein 12 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=PEX12 PE=3 SV=1 | 1 | 427 | 6.0E-157 |
| sp|Q01961|PEX12_PICPA | Peroxisome assembly protein 12 OS=Komagataella pastoris GN=PEX12 PE=3 SV=1 | 1 | 427 | 2.0E-44 |
| sp|O00623|PEX12_HUMAN | Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1 | 13 | 383 | 6.0E-31 |
| sp|Q9ET67|PEX12_CRILO | Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1 | 13 | 383 | 1.0E-30 |
| sp|Q8VC48|PEX12_MOUSE | Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1 | 13 | 279 | 6.0E-30 |
| sp|A4FUD4|PEX12_BOVIN | Peroxisome assembly protein 12 OS=Bos taurus GN=PEX12 PE=2 SV=1 | 13 | 383 | 2.0E-29 |
| sp|O88177|PEX12_RAT | Peroxisome assembly protein 12 OS=Rattus norvegicus GN=Pex12 PE=2 SV=1 | 13 | 383 | 4.0E-28 |
| sp|Q54N40|PEX12_DICDI | Putative peroxisome assembly protein 12 OS=Dictyostelium discoideum GN=pex12 PE=3 SV=1 | 3 | 384 | 2.0E-23 |
| sp|Q19189|PEX12_CAEEL | Putative peroxisome assembly protein 12 OS=Caenorhabditis elegans GN=prx-12 PE=3 SV=1 | 12 | 384 | 2.0E-21 |
| sp|Q04370|PEX12_YEAST | Peroxisome assembly protein 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX12 PE=1 SV=1 | 16 | 427 | 4.0E-21 |
| sp|Q9M841|PEX12_ARATH | Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana GN=PEX12 PE=1 SV=2 | 12 | 383 | 1.0E-18 |
| sp|Q8TFH8|PEX12_SCHPO | Peroxisome assembly protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pex12 PE=3 SV=2 | 14 | 388 | 2.0E-18 |
| sp|Q9VPT5|PEX12_DROME | Peroxisome assembly protein 12 OS=Drosophila melanogaster GN=Pex12 PE=2 SV=1 | 13 | 379 | 2.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 176 | 198 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1587 MEFVAALRGTFDDNKPSLFEVLSEQQLNGLLPPTLRYLLTVATQRHPRYLLRILNSFDELYALSMLLVERHYLRT RAGSFTENFYGLKRERALEGEIPRASLAAPRLVREALGLTTADVWRNLAVLVGLPYVKRKLDEDYEVNAPRALLG AAYTRMPENPSLRQRFLHYYRYFLRHVYPTVNAAYYFALLAFNLGYLFDRTKYHNPFMWLIGTRLRRMTRADHLA IESLAKTSNAAARPGPRSILSPSQLGAKAMSSLSLLLPVSIFALKFLEWWYQSDFAKQLSRKAGEHVDLPPPVLS SPRSKCAPGRGTSEKGKEPAEGGSPAEITAEDAPIATPSMLPVYVVRTPQDTSACPICQDDIVTPTACQTGVVYC YSCIHKWIEGSHPRQESFMENRAGQWESGQGRCAVTGKRILGGTEGLRRIMV* |
| Coding | >Hirsu2|1587 ATGGAATTCGTCGCGGCCCTCCGGGGCACCTTCGACGACAACAAGCCGTCCCTGTTCGAGGTCCTCTCCGAGCAG CAGCTCAACGGGCTCCTCCCCCCGACGCTCCGCTACCTCCTCACCGTCGCCACCCAGCGCCACCCGAGATACCTG CTGCGGATCCTCAACTCGTTCGACGAGCTGTACGCCCTGTCCATGCTGCTGGTCGAGCGCCACTACCTCCGCACC CGCGCCGGCTCCTTCACCGAGAACTTCTACGGGCTCAAGCGCGAGAGGGCCCTCGAGGGCGAGATCCCGCGCGCC AGCCTCGCCGCCCCGCGCCTGGTGCGCGAGGCCCTCGGGCTGACGACGGCCGACGTCTGGAGGAACCTCGCCGTG CTCGTCGGCCTGCCCTACGTCAAGAGGAAGCTGGACGAGGACTACGAGGTCAACGCGCCGCGCGCCCTGCTCGGC GCCGCCTACACGCGCATGCCCGAGAATCCGTCGCTGCGCCAGCGCTTCCTGCACTACTATCGCTACTTCCTGCGC CACGTCTACCCGACCGTCAACGCCGCCTACTACTTCGCCCTGCTGGCCTTCAACCTCGGCTACCTCTTCGACCGC ACCAAGTACCACAACCCGTTCATGTGGCTCATCGGCACCAGGCTGCGCAGGATGACCCGGGCTGACCATCTGGCC ATCGAGTCCCTGGCCAAGACATCCAACGCCGCCGCGCGACCCGGTCCGCGCTCCATCCTGTCGCCCAGCCAGCTG GGCGCCAAGGCCATGTCCAGCCTCTCCCTGCTCCTCCCCGTCAGCATCTTCGCCCTCAAGTTCCTGGAGTGGTGG TACCAGTCCGATTTCGCCAAGCAGCTCTCCCGCAAGGCTGGCGAGCACGTCGATCTCCCGCCACCCGTCCTGTCA AGCCCCAGGAGCAAATGCGCGCCCGGGAGGGGGACGAGCGAGAAGGGAAAGGAGCCGGCCGAGGGAGGCAGCCCG GCCGAGATCACGGCCGAGGATGCCCCGATCGCGACTCCCTCCATGCTGCCCGTCTACGTCGTCCGGACGCCCCAA GACACCTCGGCGTGCCCCATCTGCCAGGACGACATTGTCACGCCCACGGCCTGCCAGACCGGCGTCGTCTACTGC TACTCCTGCATCCACAAGTGGATCGAGGGCTCACACCCCAGGCAGGAGAGTTTCATGGAGAACCGCGCCGGGCAA TGGGAGAGCGGCCAGGGCCGATGCGCCGTCACTGGGAAACGCATTCTTGGCGGAACCGAGGGCCTGCGGCGCATC ATGGTATAG |
| Transcript | >Hirsu2|1587 ATGGAATTCGTCGCGGCCCTCCGGGGCACCTTCGACGACAACAAGCCGTCCCTGTTCGAGGTCCTCTCCGAGCAG CAGCTCAACGGGCTCCTCCCCCCGACGCTCCGCTACCTCCTCACCGTCGCCACCCAGCGCCACCCGAGATACCTG CTGCGGATCCTCAACTCGTTCGACGAGCTGTACGCCCTGTCCATGCTGCTGGTCGAGCGCCACTACCTCCGCACC CGCGCCGGCTCCTTCACCGAGAACTTCTACGGGCTCAAGCGCGAGAGGGCCCTCGAGGGCGAGATCCCGCGCGCC AGCCTCGCCGCCCCGCGCCTGGTGCGCGAGGCCCTCGGGCTGACGACGGCCGACGTCTGGAGGAACCTCGCCGTG CTCGTCGGCCTGCCCTACGTCAAGAGGAAGCTGGACGAGGACTACGAGGTCAACGCGCCGCGCGCCCTGCTCGGC GCCGCCTACACGCGCATGCCCGAGAATCCGTCGCTGCGCCAGCGCTTCCTGCACTACTATCGCTACTTCCTGCGC CACGTCTACCCGACCGTCAACGCCGCCTACTACTTCGCCCTGCTGGCCTTCAACCTCGGCTACCTCTTCGACCGC ACCAAGTACCACAACCCGTTCATGTGGCTCATCGGCACCAGGCTGCGCAGGATGACCCGGGCTGACCATCTGGCC ATCGAGTCCCTGGCCAAGACATCCAACGCCGCCGCGCGACCCGGTCCGCGCTCCATCCTGTCGCCCAGCCAGCTG GGCGCCAAGGCCATGTCCAGCCTCTCCCTGCTCCTCCCCGTCAGCATCTTCGCCCTCAAGTTCCTGGAGTGGTGG TACCAGTCCGATTTCGCCAAGCAGCTCTCCCGCAAGGCTGGCGAGCACGTCGATCTCCCGCCACCCGTCCTGTCA AGCCCCAGGAGCAAATGCGCGCCCGGGAGGGGGACGAGCGAGAAGGGAAAGGAGCCGGCCGAGGGAGGCAGCCCG GCCGAGATCACGGCCGAGGATGCCCCGATCGCGACTCCCTCCATGCTGCCCGTCTACGTCGTCCGGACGCCCCAA GACACCTCGGCGTGCCCCATCTGCCAGGACGACATTGTCACGCCCACGGCCTGCCAGACCGGCGTCGTCTACTGC TACTCCTGCATCCACAAGTGGATCGAGGGCTCACACCCCAGGCAGGAGAGTTTCATGGAGAACCGCGCCGGGCAA TGGGAGAGCGGCCAGGGCCGATGCGCCGTCACTGGGAAACGCATTCTTGGCGGAACCGAGGGCCTGCGGCGCATC ATGGTATAG |
| Gene | >Hirsu2|1587 ATGGAATTCGTCGCGGCCCTCCGGGGCACCTTCGACGACAACAAGCCGTCCCTGTTCGAGGTCCTCTCCGAGCAG CAGCTCAACGGGCTCCTCCCCCCGACGCTCCGCTACCTCCTCACCGTCGCCACCCAGCGCCACCCGAGATACCTG CTGCGGATCCTCAACTCGTTCGACGAGCTGTACGCCCTGTCCATGCTGCTGGTCGAGCGCCACTACCTCCGCACC CGCGCCGGCTCCTTCACCGAGAACTTCTACGGGCTCAAGCGCGAGAGGGCCCTCGAGGGCGAGATCCCGCGCGCC AGCCTCGCCGCCCCGCGCCTGGTGCGCGAGGCCCTCGGGCTGACGACGGCCGACGTCTGGAGGAACCTCGCCGTG CTCGTCGGCCTGCCCTACGTCAAGAGGAAGCTGGACGAGGACTACGAGGTCAACGCGCCGCGCGCCCTGCTCGGC GCCGCCTACACGCGCATGCCCGAGAATCCGTCGCTGCGCCAGCGCTTCCTGCACTACTATCGCTACTTCCTGCGC CACGTCTACCCGACCGTCAACGCCGCCTACTACTTCGCCCTGCTGGCCTTCAACCTCGGCTACCTCTTCGACCGC ACCAAGTACCACAACCCGTTCATGTGGCTCATCGGCACCAGGCTGCGCAGGATGACCCGGGCTGACCATCTGGCC ATCGAGTCCCTGGCCAAGACATCCAACGCCGCCGCGCGACCCGGTCCGCGCTCCATCCTGTCGCCCAGCCAGCTG GGCGCCAAGGCCATGTCCAGCCTCTCCCTGCTCCTCCCCGTCAGCATCTTCGCCCTCAAGTTCCTGGAGTGGTGG TACCAGTCCGATTTCGCCAAGCAGCTCTCCCGCAAGGCTGGCGAGCACGTCGATCTCCCGCCACCCGTCCTGTCA AGCCCCAGGAGCAAATGCGCGCCCGGGAGGGGGACGAGCGAGAAGGGAAAGGAGCCGGCCGAGGGAGGCAGCCCG GCCGAGATCACGGCCGAGGATGCCCCGATCGCGACTCCCTCCATGCTGCCCGTCTACGTCGTCCGGACGCCCCAA GACACCTCGGCGTGCCCCATCTGCCAGGACGACATTGTCACGCCCACGGCCTGCCAGACCGGCGTCGTCTACTGC TACTCCTGCATCCACAAGTGGATCGAGGGCTCACACCCCAGGCAGGAGAGTTTCATGGAGAACCGCGCCGGGCAA TGGGAGAGCGGCCAGGGCCGATGCGCCGTCACTGGGAAACGCATTCTTGGCGGAACCGAGGGCCTGCGGCGCATC ATGGTATAG |