Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1582
Gene name
LocationContig_1351:5738..6957
Strand-
Gene length (bp)1219
Transcript length (bp)1077
Coding sequence length (bp)1077
Protein length (aa) 359

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00098 zf-CCHC Zinc knuckle 3.8E-05 94 110
PF00098 zf-CCHC Zinc knuckle 7.8E-06 119 134
PF13917 zf-CCHC_3 Zinc knuckle 3.9E-03 92 110
PF13917 zf-CCHC_3 Zinc knuckle 3.8E-01 115 135

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bbp-1 PE=3 SV=1 1 276 1.0E-129
sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3 SV=1 1 275 3.0E-110
sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bpb1 PE=1 SV=1 1 179 2.0E-68
sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BBP PE=3 SV=1 1 184 6.0E-55
sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1 1 184 6.0E-55
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Swissprot ID Swissprot Description Start End E-value
sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bbp-1 PE=3 SV=1 1 276 1.0E-129
sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3 SV=1 1 275 3.0E-110
sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bpb1 PE=1 SV=1 1 179 2.0E-68
sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BBP PE=3 SV=1 1 184 6.0E-55
sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1 1 184 6.0E-55
sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC 9021) GN=BBP PE=3 SV=1 1 177 1.0E-51
sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BBP PE=3 SV=1 1 279 4.0E-47
sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP PE=3 SV=1 1 133 2.0E-40
sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1 1 150 2.0E-39
sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2 1 133 2.0E-34
sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6 1 192 5.0E-29
sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4 1 192 8.0E-29
sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BBP PE=3 SV=1 1 133 3.0E-26
sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=BBP PE=3 SV=2 1 136 2.0E-23
sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1 1 113 3.0E-18
sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans GN=gld-1 PE=1 SV=1 1 88 2.0E-10
sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1 1 89 7.0E-10
sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1 1 89 7.0E-10
sp|Q9GMY1|QKI_CANLF Protein quaking OS=Canis lupus familiaris GN=QKI PE=2 SV=1 1 89 7.0E-10
sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1 1 89 7.0E-10
sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1 1 89 7.0E-10
sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1 1 89 7.0E-10
sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1 1 89 7.0E-10
sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1 1 89 7.0E-10
sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2 1 89 8.0E-10
sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2 1 89 9.0E-10
sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2 1 89 1.0E-09
sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1 1 89 1.0E-09
sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1 1 117 2.0E-09
sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1 1 90 3.0E-09
sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2 1 94 6.0E-09
sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1 1 90 6.0E-08
sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1 1 90 1.0E-06
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GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:0046872 metal ion binding No
GO:0046914 transition metal ion binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal|Nuclear export signal 0.5804 0.7816 0.0561 0.0164 0.0325 0.0014 0.0874 0.133 0.0379 0.0013

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, CCHC-type

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7500
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5689
Ophiocordyceps subramaniannii Hirsu2|1582 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1582
MEADSGAKIAIRGKGSVKEGKGRSDAAHSSNQEEDLHCLIMADTEEKINKAKQLIHNVIETAASIPEGQNELKRN
QLRELAALNGTLRDDENQACQNCGKIGHRKYDCPERQNFTASIICRVCGNAGHMARDCPDRQRGASWRNHDVNGG
RHAGRIGGGGGGDAVDREMEQLMQELGGGPGGAPAQIEAGPGGHDDRDAKPWHRGPTGGPAPWRSRHHDSHHDGG
SGGSGGGHGGSSAPWARERHRGHDHHGDGYHGHSSYGSGGGSGHGSAPWHQPAPGTHGGYHGYSGGYGGYGGAPG
TGSAPGPPPGLGPSGGAPGMGGSSDPYQHYPPPPPPSGESPPPPPPSNQPPPPPPPGA*
Coding >Hirsu2|1582
ATGGAGGCGGACTCGGGTGCCAAGATTGCCATCCGTGGCAAGGGCTCCGTCAAGGAGGGCAAGGGACGTTCCGAC
GCTGCTCACTCCAGCAACCAAGAAGAGGATCTCCACTGCCTCATCATGGCCGACACCGAGGAGAAGATCAACAAG
GCCAAGCAGCTGATCCACAACGTCATCGAGACGGCCGCTTCCATCCCTGAGGGGCAGAACGAGCTCAAGCGGAAC
CAGCTTCGAGAGCTGGCCGCGCTCAACGGAACGTTGCGTGACGACGAGAACCAGGCCTGCCAGAACTGCGGTAAG
ATCGGACACCGCAAGTATGATTGCCCTGAGCGACAGAACTTCACTGCGAGCATCATCTGCCGCGTTTGCGGCAAT
GCCGGTCATATGGCACGTGACTGTCCCGACCGCCAGAGAGGTGCCAGCTGGCGCAACCACGACGTCAACGGCGGT
CGTCACGCTGGCAGGATTGGCGGCGGCGGCGGCGGCGACGCTGTTGATCGCGAGATGGAGCAACTCATGCAAGAG
CTTGGCGGAGGTCCTGGCGGCGCTCCGGCCCAGATCGAAGCCGGCCCGGGCGGCCACGACGACAGAGACGCCAAG
CCCTGGCACCGCGGCCCGACTGGCGGACCCGCTCCGTGGCGCTCGCGTCACCACGACTCTCATCATGATGGAGGC
TCCGGCGGCTCCGGAGGAGGCCACGGCGGCTCGTCGGCCCCCTGGGCTCGAGAGCGTCATCGCGGACACGACCAT
CACGGCGACGGCTACCACGGCCACTCGTCGTATGGCTCCGGCGGCGGCTCGGGCCATGGCTCTGCCCCGTGGCAC
CAGCCTGCGCCCGGAACTCATGGCGGCTACCACGGATACTCGGGAGGGTACGGTGGCTACGGCGGAGCGCCGGGC
ACGGGTTCTGCCCCCGGCCCGCCCCCCGGCCTCGGACCGTCGGGCGGAGCCCCCGGCATGGGCGGATCGAGCGAC
CCGTATCAGCACTACCCCCCGCCGCCTCCTCCGTCGGGAGAGTCCCCGCCCCCTCCTCCCCCGAGCAACCAGCCA
CCGCCGCCTCCGCCTCCCGGCGCATAG
Transcript >Hirsu2|1582
ATGGAGGCGGACTCGGGTGCCAAGATTGCCATCCGTGGCAAGGGCTCCGTCAAGGAGGGCAAGGGACGTTCCGAC
GCTGCTCACTCCAGCAACCAAGAAGAGGATCTCCACTGCCTCATCATGGCCGACACCGAGGAGAAGATCAACAAG
GCCAAGCAGCTGATCCACAACGTCATCGAGACGGCCGCTTCCATCCCTGAGGGGCAGAACGAGCTCAAGCGGAAC
CAGCTTCGAGAGCTGGCCGCGCTCAACGGAACGTTGCGTGACGACGAGAACCAGGCCTGCCAGAACTGCGGTAAG
ATCGGACACCGCAAGTATGATTGCCCTGAGCGACAGAACTTCACTGCGAGCATCATCTGCCGCGTTTGCGGCAAT
GCCGGTCATATGGCACGTGACTGTCCCGACCGCCAGAGAGGTGCCAGCTGGCGCAACCACGACGTCAACGGCGGT
CGTCACGCTGGCAGGATTGGCGGCGGCGGCGGCGGCGACGCTGTTGATCGCGAGATGGAGCAACTCATGCAAGAG
CTTGGCGGAGGTCCTGGCGGCGCTCCGGCCCAGATCGAAGCCGGCCCGGGCGGCCACGACGACAGAGACGCCAAG
CCCTGGCACCGCGGCCCGACTGGCGGACCCGCTCCGTGGCGCTCGCGTCACCACGACTCTCATCATGATGGAGGC
TCCGGCGGCTCCGGAGGAGGCCACGGCGGCTCGTCGGCCCCCTGGGCTCGAGAGCGTCATCGCGGACACGACCAT
CACGGCGACGGCTACCACGGCCACTCGTCGTATGGCTCCGGCGGCGGCTCGGGCCATGGCTCTGCCCCGTGGCAC
CAGCCTGCGCCCGGAACTCATGGCGGCTACCACGGATACTCGGGAGGGTACGGTGGCTACGGCGGAGCGCCGGGC
ACGGGTTCTGCCCCCGGCCCGCCCCCCGGCCTCGGACCGTCGGGCGGAGCCCCCGGCATGGGCGGATCGAGCGAC
CCGTATCAGCACTACCCCCCGCCGCCTCCTCCGTCGGGAGAGTCCCCGCCCCCTCCTCCCCCGAGCAACCAGCCA
CCGCCGCCTCCGCCTCCCGGCGCATAG
Gene >Hirsu2|1582
ATGGAGGCGGACTCGGGTGCCAAGATTGCCATCCGTGGCAAGGGCTCCGTCAAGGAGGGCAAGGGACGTTCCGAC
GCTGCTCACTCCAGCAACCAAGAAGAGGATCTCCACTGCCTCATCATGGCCGACACCGAGGAGAAGATCAACAAG
GCCAAGCAGCTGATCCACAACGTCATCGAGACGGTGAGTATACCTGAACCCGTCCCAGACACGTCCGTTCACGAA
GCGTTGTCGCTGACCTTGCCGTGCCAGGCCGCTTCCATCCCTGAGGGGCAGAACGAGCTCAAGCGGAACCAGCTT
CGAGAGCTGGCCGCGCTCAACGGAACGTTGCGTGACGACGAGAACCAGGCCTGCCAGAACTGCGGTAAGATCGGA
CACCGCAAGTATGATTGCCCTGAGCGACAGAACTTCACTGCGAGCATCATCTGCCGCGTTTGCGGCAATGCCGGT
CATATGGCACGTGACTGTCCCGACCGCCAGAGAGGTGCCAGCTGGCGCAACCACGACGTCAACGGCGGTCGTCAC
GCTGGCAGGATTGGCGGCGGCGGCGGCGGCGACGCTGTTGATCGCGAGATGGAGGTACGCTCCCCCATATTCTCC
ATGTCTCTCTCCTCCTTGTTCGGCTCACGATCGGTGCTAACGACGAGTGCAGCAACTCATGCAAGAGCTTGGCGG
AGGTCCTGGCGGCGCTCCGGCCCAGATCGAAGCCGGCCCGGGCGGCCACGACGACAGAGACGCCAAGCCCTGGCA
CCGCGGCCCGACTGGCGGACCCGCTCCGTGGCGCTCGCGTCACCACGACTCTCATCATGATGGAGGCTCCGGCGG
CTCCGGAGGAGGCCACGGCGGCTCGTCGGCCCCCTGGGCTCGAGAGCGTCATCGCGGACACGACCATCACGGCGA
CGGCTACCACGGCCACTCGTCGTATGGCTCCGGCGGCGGCTCGGGCCATGGCTCTGCCCCGTGGCACCAGCCTGC
GCCCGGAACTCATGGCGGCTACCACGGATACTCGGGAGGGTACGGTGGCTACGGCGGAGCGCCGGGCACGGGTTC
TGCCCCCGGCCCGCCCCCCGGCCTCGGACCGTCGGGCGGAGCCCCCGGCATGGGCGGATCGAGCGACCCGTATCA
GCACTACCCCCCGCCGCCTCCTCCGTCGGGAGAGTCCCCGCCCCCTCCTCCCCCGAGCAACCAGCCACCGCCGCC
TCCGCCTCCCGGCGCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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