Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1568
Gene name
LocationContig_135:17843..19379
Strand+
Gene length (bp)1536
Transcript length (bp)1152
Coding sequence length (bp)1152
Protein length (aa) 384

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11754 Velvet Velvet factor 1.4E-93 50 370

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1568
MQPPPPPPGNPLRQEETPADTTISPANPPASSLVVLAPFSKVDDATGRKYQLDVVQQPRRARMCGFGDKDRRPIT
PPPCVRLIITEAATGREIDCNSIDHSMFVLNVDLWNEDGTREVNLVRSSTGSPSISSTTPYSYTTLNGGDASTVP
YPQHVLPSSRDATFNPSQSVGFVQDYQMPSGYGQASYPSNGTGTYGPPQQFYPQHQAYRQDGAVAPVPSQANVSQ
FTRNGIPVAPGFVQDQNSLTRMAMVGGQPQGMFTRNLIGSLAASAFRLSDTSDHIGIWFVLQDLSVRTEGAFRLR
FSFVNVGARGGARRDGNAPRVNTGRAPILASCFSDVFNVYSAKKFPGVCESTPLSKTFATQGIKIPIRKDANVKG
GDDDDYGE*
Coding >Hirsu2|1568
ATGCAGCCGCCGCCGCCACCACCGGGCAATCCCCTCAGACAGGAAGAGACGCCGGCTGACACGACCATCTCACCG
GCCAACCCACCAGCCAGCTCGCTGGTGGTGCTTGCCCCCTTTTCCAAGGTCGACGATGCCACGGGCCGCAAATAC
CAACTCGACGTCGTGCAGCAACCGAGACGTGCTCGCATGTGCGGATTTGGTGACAAGGATAGAAGGCCCATTACT
CCCCCCCCTTGCGTACGGCTCATCATCACGGAAGCGGCCACCGGCCGAGAGATAGACTGCAACTCCATCGATCAC
TCCATGTTCGTCCTCAACGTCGATCTTTGGAATGAGGATGGAACGCGCGAGGTCAACCTGGTTCGATCCTCGACT
GGCAGCCCTTCCATCTCATCGACCACGCCGTATTCGTACACGACGCTCAACGGGGGCGACGCTTCCACGGTGCCA
TACCCCCAGCATGTCCTCCCTTCCAGTCGCGACGCAACATTCAACCCGTCTCAGTCAGTCGGCTTCGTGCAGGAC
TACCAGATGCCGTCTGGCTACGGCCAAGCGTCGTATCCCTCCAACGGTACCGGTACCTACGGGCCTCCGCAACAG
TTCTACCCGCAACACCAAGCCTACCGCCAAGACGGAGCTGTTGCTCCAGTACCGTCACAAGCCAACGTGTCACAA
TTCACGAGAAATGGCATCCCCGTGGCGCCTGGCTTCGTACAGGACCAAAACTCGTTGACGCGCATGGCCATGGTG
GGCGGACAGCCGCAGGGCATGTTCACCAGGAATCTCATCGGGAGCCTGGCAGCCAGCGCCTTTCGACTCAGCGAT
ACGTCCGACCATATAGGTATCTGGTTCGTGCTTCAGGACTTGAGCGTCCGCACCGAAGGTGCCTTCCGCCTCAGA
TTCTCGTTTGTCAATGTCGGAGCGCGAGGTGGAGCACGTCGTGATGGTAACGCTCCAAGGGTCAACACGGGCCGC
GCCCCAATATTGGCATCATGCTTCAGCGACGTGTTCAACGTCTACTCGGCCAAGAAATTCCCGGGCGTGTGCGAG
AGCACACCGTTGAGCAAGACGTTTGCCACGCAGGGAATCAAGATTCCCATTCGAAAAGACGCAAACGTCAAGGGC
GGTGACGACGACGACTACGGCGAATAG
Transcript >Hirsu2|1568
ATGCAGCCGCCGCCGCCACCACCGGGCAATCCCCTCAGACAGGAAGAGACGCCGGCTGACACGACCATCTCACCG
GCCAACCCACCAGCCAGCTCGCTGGTGGTGCTTGCCCCCTTTTCCAAGGTCGACGATGCCACGGGCCGCAAATAC
CAACTCGACGTCGTGCAGCAACCGAGACGTGCTCGCATGTGCGGATTTGGTGACAAGGATAGAAGGCCCATTACT
CCCCCCCCTTGCGTACGGCTCATCATCACGGAAGCGGCCACCGGCCGAGAGATAGACTGCAACTCCATCGATCAC
TCCATGTTCGTCCTCAACGTCGATCTTTGGAATGAGGATGGAACGCGCGAGGTCAACCTGGTTCGATCCTCGACT
GGCAGCCCTTCCATCTCATCGACCACGCCGTATTCGTACACGACGCTCAACGGGGGCGACGCTTCCACGGTGCCA
TACCCCCAGCATGTCCTCCCTTCCAGTCGCGACGCAACATTCAACCCGTCTCAGTCAGTCGGCTTCGTGCAGGAC
TACCAGATGCCGTCTGGCTACGGCCAAGCGTCGTATCCCTCCAACGGTACCGGTACCTACGGGCCTCCGCAACAG
TTCTACCCGCAACACCAAGCCTACCGCCAAGACGGAGCTGTTGCTCCAGTACCGTCACAAGCCAACGTGTCACAA
TTCACGAGAAATGGCATCCCCGTGGCGCCTGGCTTCGTACAGGACCAAAACTCGTTGACGCGCATGGCCATGGTG
GGCGGACAGCCGCAGGGCATGTTCACCAGGAATCTCATCGGGAGCCTGGCAGCCAGCGCCTTTCGACTCAGCGAT
ACGTCCGACCATATAGGTATCTGGTTCGTGCTTCAGGACTTGAGCGTCCGCACCGAAGGTGCCTTCCGCCTCAGA
TTCTCGTTTGTCAATGTCGGAGCGCGAGGTGGAGCACGTCGTGATGGTAACGCTCCAAGGGTCAACACGGGCCGC
GCCCCAATATTGGCATCATGCTTCAGCGACGTGTTCAACGTCTACTCGGCCAAGAAATTCCCGGGCGTGTGCGAG
AGCACACCGTTGAGCAAGACGTTTGCCACGCAGGGAATCAAGATTCCCATTCGAAAAGACGCAAACGTCAAGGGC
GGTGACGACGACGACTACGGCGAATAG
Gene >Hirsu2|1568
ATGCAGCCGCCGCCGCCACCACCGGGCAATCCCCTCAGACAGGAAGAGACGCCGGCTGACACGACCATCTCACCG
GCCAACCCACCAGCCAGCTCGCTGGTGGTGCTTGCCCCCTTTTCCAAGGTCGACGATGCCACGGGCCGCAAATAC
CAGTGCGTCCAGTCCCCGACTGAGCCTCTTCTCCTGATTCCTTTGCCCCGCCGCCCGGCCTTGCTGAAGCTTGCT
CCCGAACAGACTCGACGTCGTGCAGCAACCGAGACGTGCTCGCATGTGCGGATTTGGTGACAAGGTCGATCCCCC
CCCCAGATTGGCCGCCAACTGCCCGCCTCGCTCTGCACGACCGACCCCCTTTACTGACTTCATAGTAGGATAGAA
GGCCCATTACTCCCCCCCCTTGCGTACGGCTCATCATCACGGAAGCGGCCACCGGCCGAGAGATAGACTGCAAGT
AAGTCGACCTCTCCCTCGTTATTGCTGCCGGAAGGGGGTCCGCGGCCCCTACTGTTCCCCAAGACCCATCGTTGA
CATTCAATCCATCCACCTGCGACAGCTCCATCGATCACTCCATGTTCGTCCTCAACGTCGATCTTTGGAATGAGG
ATGGAACGCGCGAGGTCAACCTGGTTCGATCCTCGACTGGCAGCCCTTCCATCTCATCGACCACGCCGTATTCGT
ACACGACGCTCAACGGGGGCGACGCTTCCACGGTGCCATACCCCCAGCATGTCCTCCCTTCCAGTCGCGACGCAA
CATTCAACCCGTCTCAGTCAGTCGGCTTCGTGCAGGACTACCAGATGCCGTCTGGCTACGGCCAAGGTGGGTTGA
GAACACGTTCGCTTGCATCTCCGTCCGCTGACCTCTGGTTCGAGCGGCAGCGTCGTATCCCTCCAACGGTACCGG
TACCTACGGGCCTCCGCAACAGTTCTACCCGCAACACCAAGCCTACCGCCAAGACGGAGCTGTTGCTCCAGTACC
GTCACAAGCCAACGTGTCACAATTCACGAGAAATGGCATCCCCGTGGCGCCTGGCTTCGTACAGGACCAAAACTC
GTTGACGCGCATGGCCATGGTGGGCGGACAGCCGCAGGGCATGTTCACCAGGAATCTCATCGGGAGCCTGGCAGC
CAGCGCCTTTCGACTCAGCGATACGTCCGACCATATAGGTATCTGGTTCGTGCTTCAGGACTTGAGCGTCCGCAC
CGAAGGTGCCTTCCGGTAAGATGTCTGACAGGGAGATGGGTCAATGCATCTGACGATGGGGCTGACTGTCGGGAT
AGCCTCAGATTCTCGTTTGTCAATGTCGGAGCGCGAGGTGGAGCACGTCGTGATGGTAACGCTCCAAGGGTCAAC
ACGGGCCGCGCCCCAATATTGGCATCATGCTTCAGCGACGTGTTCAACGTCTACTCGGCCAAGAAATTCCCGGGC
GTGTGCGAGAGCACACCGTTGAGCAAGACGTTTGCCACGCAGGGAATCAAGATTCCCATTCGAAAAGACGCAAAC
GTCAAGGGCGGTGACGACGACGACTACGGCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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