Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1562
Gene name
LocationContig_135:10322..10854
Strand-
Gene length (bp)532
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Endoplasmic reticulum Signal peptide|Transmembrane domain 0.2023 0.1993 0.0897 0.5527 0.44 0.0311 0.7784 0.5376 0.455 0.1935

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 35 57 22
2 125 147 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6960
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7101
Ophiocordyceps australis map64 (Brazil) OphauB2|5551
Ophiocordyceps subramaniannii Hirsu2|1562 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1562
MARSGWAASPTPLADSSSAGVDQTEAQEPSSVYKLVMTPVNFISFLVSLALVDLCYTQTRQHRHAERPSRLPCWL
RTLLFRPQPYRAFGRRERGTGPAGHGEWHYHSNQEKLMEMEAADALNLRGAVLVLLALALAGATGLAYYGLSSLC
RHFQP*
Coding >Hirsu2|1562
ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG
GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC
CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG
CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT
GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC
GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC
CGCCACTTCCAGCCTTGA
Transcript >Hirsu2|1562
ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG
GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC
CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG
CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT
GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC
GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC
CGCCACTTCCAGCCTTGA
Gene >Hirsu2|1562
ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG
GCTCAGGAACCGTCATCAGTCTACAAGGTATTGACGAAGTCCGATCCATGCCCACCGGCCGCAGTCGGCTGACCG
TGATGTGCCGCGCAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCCCTAGTGGACCT
GTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTGCGTACGCTCCT
CTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCATGGAGAATGGCA
CTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGCGCCGTACTGGT
GCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGCCGCCACTTCCA
GCCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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