Protein ID | Hirsu2|1562 |
Gene name | |
Location | Contig_135:10322..10854 |
Strand | - |
Gene length (bp) | 532 |
Transcript length (bp) | 468 |
Coding sequence length (bp) | 468 |
Protein length (aa) | 156 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.2023 | 0.1993 | 0.0897 | 0.5527 | 0.44 | 0.0311 | 0.7784 | 0.5376 | 0.455 | 0.1935 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 35 | 57 | 22 |
2 | 125 | 147 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6960 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|7101 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|5551 |
Ophiocordyceps subramaniannii | Hirsu2|1562 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1562 MARSGWAASPTPLADSSSAGVDQTEAQEPSSVYKLVMTPVNFISFLVSLALVDLCYTQTRQHRHAERPSRLPCWL RTLLFRPQPYRAFGRRERGTGPAGHGEWHYHSNQEKLMEMEAADALNLRGAVLVLLALALAGATGLAYYGLSSLC RHFQP* |
Coding | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC CGCCACTTCCAGCCTTGA |
Transcript | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC CGCCACTTCCAGCCTTGA |
Gene | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGGTATTGACGAAGTCCGATCCATGCCCACCGGCCGCAGTCGGCTGACCG TGATGTGCCGCGCAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCCCTAGTGGACCT GTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTGCGTACGCTCCT CTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCATGGAGAATGGCA CTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGCGCCGTACTGGT GCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGCCGCCACTTCCA GCCTTGA |