© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1562 |
| Gene name | |
| Location | Contig_135:10322..10854 |
| Strand | - |
| Gene length (bp) | 532 |
| Transcript length (bp) | 468 |
| Coding sequence length (bp) | 468 |
| Protein length (aa) | 156 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane|Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.2023 | 0.1993 | 0.0897 | 0.5527 | 0.44 | 0.0311 | 0.7784 | 0.5376 | 0.455 | 0.1935 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 35 | 57 | 22 |
| 2 | 125 | 147 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 6960 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|7101 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|5551 |
| Ophiocordyceps subramaniannii | Hirsu2|1562 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1562 MARSGWAASPTPLADSSSAGVDQTEAQEPSSVYKLVMTPVNFISFLVSLALVDLCYTQTRQHRHAERPSRLPCWL RTLLFRPQPYRAFGRRERGTGPAGHGEWHYHSNQEKLMEMEAADALNLRGAVLVLLALALAGATGLAYYGLSSLC RHFQP* |
| Coding | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC CGCCACTTCCAGCCTTGA |
| Transcript | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCC CTAGTGGACCTGTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTG CGTACGCTCCTCTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCAT GGAGAATGGCACTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGC GCCGTACTGGTGCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGC CGCCACTTCCAGCCTTGA |
| Gene | >Hirsu2|1562 ATGGCCCGGTCAGGATGGGCGGCATCGCCAACCCCGCTCGCGGATTCTTCCTCTGCCGGGGTAGACCAGACTGAG GCTCAGGAACCGTCATCAGTCTACAAGGTATTGACGAAGTCCGATCCATGCCCACCGGCCGCAGTCGGCTGACCG TGATGTGCCGCGCAAGCTCGTCATGACACCCGTCAACTTCATCTCGTTCCTCGTCTCGCTTGCCCTAGTGGACCT GTGCTACACCCAGACGCGACAGCATCGCCACGCCGAAAGGCCCAGCCGCCTGCCATGCTGGCTGCGTACGCTCCT CTTCCGGCCCCAGCCGTACCGTGCCTTCGGCCGCAGAGAGCGAGGGACGGGACCCGCCGGCCATGGAGAATGGCA CTATCATAGCAACCAGGAGAAACTCATGGAGATGGAGGCAGCCGATGCCCTCAATCTACGCGGCGCCGTACTGGT GCTGTTGGCCCTGGCCCTGGCGGGAGCCACGGGGCTGGCTTACTACGGCCTAAGCTCCCTGTGCCGCCACTTCCA GCCTTGA |