© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1560 |
| Gene name | |
| Location | Contig_135:4520..6648 |
| Strand | + |
| Gene length (bp) | 2128 |
| Transcript length (bp) | 1830 |
| Coding sequence length (bp) | 1830 |
| Protein length (aa) | 610 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00520 | Ion_trans | Ion transport protein | 1.0E-10 | 8 | 89 |
| PF00520 | Ion_trans | Ion transport protein | 7.9E-25 | 140 | 389 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14234|CCH1_SCHPO | Calcium-channel protein cch1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cch1 PE=3 SV=1 | 3 | 600 | 4.0E-127 |
| sp|P50077|CCH1_YEAST | Calcium-channel protein CCH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCH1 PE=1 SV=1 | 1 | 581 | 8.0E-94 |
| sp|Q6Q760|NALCN_RAT | Sodium leak channel non-selective protein OS=Rattus norvegicus GN=Nalcn PE=1 SV=1 | 3 | 418 | 1.0E-36 |
| sp|Q8IZF0|NALCN_HUMAN | Sodium leak channel non-selective protein OS=Homo sapiens GN=NALCN PE=1 SV=1 | 3 | 418 | 1.0E-36 |
| sp|Q8BXR5|NALCN_MOUSE | Sodium leak channel non-selective protein OS=Mus musculus GN=Nalcn PE=1 SV=2 | 3 | 418 | 1.0E-36 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14234|CCH1_SCHPO | Calcium-channel protein cch1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cch1 PE=3 SV=1 | 3 | 600 | 4.0E-127 |
| sp|P50077|CCH1_YEAST | Calcium-channel protein CCH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCH1 PE=1 SV=1 | 1 | 581 | 8.0E-94 |
| sp|Q6Q760|NALCN_RAT | Sodium leak channel non-selective protein OS=Rattus norvegicus GN=Nalcn PE=1 SV=1 | 3 | 418 | 1.0E-36 |
| sp|Q8IZF0|NALCN_HUMAN | Sodium leak channel non-selective protein OS=Homo sapiens GN=NALCN PE=1 SV=1 | 3 | 418 | 1.0E-36 |
| sp|Q8BXR5|NALCN_MOUSE | Sodium leak channel non-selective protein OS=Mus musculus GN=Nalcn PE=1 SV=2 | 3 | 418 | 1.0E-36 |
| sp|Q15858|SCN9A_HUMAN | Sodium channel protein type 9 subunit alpha OS=Homo sapiens GN=SCN9A PE=1 SV=3 | 13 | 418 | 2.0E-30 |
| sp|O08562|SCN9A_RAT | Sodium channel protein type 9 subunit alpha OS=Rattus norvegicus GN=Scn9a PE=1 SV=1 | 13 | 418 | 2.0E-29 |
| sp|Q28644|SCN9A_RABIT | Sodium channel protein type 9 subunit alpha OS=Oryctolagus cuniculus GN=SCN9A PE=2 SV=1 | 13 | 418 | 2.0E-29 |
| sp|Q62205|SCN9A_MOUSE | Sodium channel protein type 9 subunit alpha OS=Mus musculus GN=Scn9a PE=1 SV=2 | 13 | 418 | 4.0E-28 |
| sp|P08104|SCN3A_RAT | Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus GN=Scn3a PE=1 SV=1 | 9 | 418 | 1.0E-27 |
| sp|P35498|SCN1A_HUMAN | Sodium channel protein type 1 subunit alpha OS=Homo sapiens GN=SCN1A PE=1 SV=2 | 9 | 430 | 2.0E-27 |
| sp|P04774|SCN1A_RAT | Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus GN=Scn1a PE=1 SV=1 | 9 | 430 | 2.0E-27 |
| sp|O46669|SCNAA_CANLF | Sodium channel protein type 10 subunit alpha OS=Canis lupus familiaris GN=SCN10A PE=2 SV=1 | 13 | 445 | 3.0E-27 |
| sp|Q99250|SCN2A_HUMAN | Sodium channel protein type 2 subunit alpha OS=Homo sapiens GN=SCN2A PE=1 SV=3 | 9 | 418 | 5.0E-27 |
| sp|Q9NY46|SCN3A_HUMAN | Sodium channel protein type 3 subunit alpha OS=Homo sapiens GN=SCN3A PE=1 SV=2 | 9 | 418 | 1.0E-26 |
| sp|P04775|SCN2A_RAT | Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus GN=Scn2a PE=1 SV=1 | 9 | 418 | 1.0E-26 |
| sp|Q9W0Y8|SCN60_DROME | Sodium channel protein 60E OS=Drosophila melanogaster GN=NaCP60E PE=2 SV=5 | 9 | 418 | 2.0E-26 |
| sp|Q14524|SCN5A_HUMAN | Sodium channel protein type 5 subunit alpha OS=Homo sapiens GN=SCN5A PE=1 SV=2 | 13 | 418 | 4.0E-26 |
| sp|Q9WTU3|SCN8A_MOUSE | Sodium channel protein type 8 subunit alpha OS=Mus musculus GN=Scn8a PE=1 SV=1 | 9 | 418 | 5.0E-26 |
| sp|Q9UQD0|SCN8A_HUMAN | Sodium channel protein type 8 subunit alpha OS=Homo sapiens GN=SCN8A PE=1 SV=1 | 9 | 418 | 5.0E-26 |
| sp|O88420|SCN8A_RAT | Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus GN=Scn8a PE=1 SV=1 | 9 | 418 | 6.0E-26 |
| sp|Q9JJV9|SCN5A_MOUSE | Sodium channel protein type 5 subunit alpha OS=Mus musculus GN=Scn5a PE=1 SV=2 | 13 | 418 | 1.0E-25 |
| sp|P15389|SCN5A_RAT | Sodium channel protein type 5 subunit alpha OS=Rattus norvegicus GN=Scn5a PE=1 SV=1 | 13 | 418 | 1.0E-25 |
| sp|Q9R053|SCNBA_MOUSE | Sodium channel protein type 11 subunit alpha OS=Mus musculus GN=Scn11a PE=2 SV=2 | 10 | 423 | 2.0E-25 |
| sp|Q2XVR5|SC4AA_TETNG | Sodium channel protein type 4 subunit alpha A OS=Tetraodon nigroviridis GN=scn4aa PE=3 SV=2 | 9 | 418 | 5.0E-25 |
| sp|Q6QIY3|SCNAA_MOUSE | Sodium channel protein type 10 subunit alpha OS=Mus musculus GN=Scn10a PE=1 SV=2 | 9 | 445 | 8.0E-25 |
| sp|P91645|CAC1A_DROME | Voltage-dependent calcium channel type A subunit alpha-1 OS=Drosophila melanogaster GN=cac PE=1 SV=3 | 12 | 418 | 2.0E-24 |
| sp|Q05973|SCN1_HETBL | Sodium channel protein 1 brain OS=Heterololigo bleekeri PE=2 SV=1 | 9 | 443 | 5.0E-24 |
| sp|Q9Y5Y9|SCNAA_HUMAN | Sodium channel protein type 10 subunit alpha OS=Homo sapiens GN=SCN10A PE=1 SV=2 | 9 | 445 | 6.0E-24 |
| sp|P0DMA5|SCNAA_ONYTO | Sodium channel protein type 10 subunit alpha OS=Onychomys torridus GN=Scn10a PE=1 SV=1 | 9 | 445 | 8.0E-24 |
| sp|C9D7C2|CAC1A_APIME | Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis mellifera GN=CAC PE=2 SV=1 | 11 | 418 | 1.0E-23 |
| sp|P15390|SCN4A_RAT | Sodium channel protein type 4 subunit alpha OS=Rattus norvegicus GN=Scn4a PE=1 SV=1 | 13 | 418 | 2.0E-23 |
| sp|O88457|SCNBA_RAT | Sodium channel protein type 11 subunit alpha OS=Rattus norvegicus GN=Scn11a PE=1 SV=1 | 10 | 418 | 2.0E-23 |
| sp|P35500|SCNA_DROME | Sodium channel protein para OS=Drosophila melanogaster GN=para PE=2 SV=3 | 9 | 441 | 2.0E-23 |
| sp|Q9ER60|SCN4A_MOUSE | Sodium channel protein type 4 subunit alpha OS=Mus musculus GN=Scn4a PE=2 SV=1 | 9 | 418 | 3.0E-23 |
| sp|Q20JQ7|SC4AB_DANRE | Sodium channel protein type 4 subunit alpha B OS=Danio rerio GN=scn4ab PE=2 SV=1 | 9 | 442 | 2.0E-22 |
| sp|Q2XVR6|SC4AB_TAKRU | Sodium channel protein type 4 subunit alpha B OS=Takifugu rubripes GN=scn4ab PE=3 SV=1 | 9 | 441 | 3.0E-22 |
| sp|Q9UI33|SCNBA_HUMAN | Sodium channel protein type 11 subunit alpha OS=Homo sapiens GN=SCN11A PE=1 SV=2 | 9 | 418 | 6.0E-22 |
| sp|P02719|SCNA_ELEEL | Sodium channel protein OS=Electrophorus electricus PE=2 SV=1 | 13 | 441 | 9.0E-22 |
| sp|Q2XVR7|SC4AA_TAKRU | Sodium channel protein type 4 subunit alpha A OS=Takifugu rubripes GN=scn4aa PE=3 SV=1 | 9 | 418 | 1.0E-21 |
| sp|Q62968|SCNAA_RAT | Sodium channel protein type 10 subunit alpha OS=Rattus norvegicus GN=Scn10a PE=1 SV=1 | 9 | 445 | 1.0E-21 |
| sp|O57483|CAC1S_LITCT | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Lithobates catesbeiana PE=2 SV=1 | 4 | 418 | 2.0E-21 |
| sp|P35499|SCN4A_HUMAN | Sodium channel protein type 4 subunit alpha OS=Homo sapiens GN=SCN4A PE=1 SV=4 | 13 | 419 | 5.0E-21 |
| sp|Q2XVR4|SC4AB_TETNG | Sodium channel protein type 4 subunit alpha B OS=Tetraodon nigroviridis GN=scn4ab PE=3 SV=1 | 13 | 418 | 4.0E-20 |
| sp|Q28371|SCN4A_HORSE | Sodium channel protein type 4 subunit alpha OS=Equus caballus GN=SCN4A PE=1 SV=1 | 9 | 418 | 4.0E-19 |
| sp|Q05152|CAC1B_RABIT | Voltage-dependent N-type calcium channel subunit alpha-1B OS=Oryctolagus cuniculus GN=CACNA1B PE=1 SV=1 | 12 | 431 | 1.0E-18 |
| sp|Q00975|CAC1B_HUMAN | Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo sapiens GN=CACNA1B PE=1 SV=1 | 12 | 431 | 4.0E-18 |
| sp|Q2XVR3|SC4AA_DANRE | Sodium channel protein type 4 subunit alpha A OS=Danio rerio GN=scn4aa PE=2 SV=2 | 9 | 418 | 1.0E-17 |
| sp|O55017|CAC1B_MOUSE | Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus musculus GN=Cacna1b PE=1 SV=1 | 12 | 431 | 1.0E-17 |
| sp|P15381|CAC1C_RABIT | Voltage-dependent L-type calcium channel subunit alpha-1C OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1 | 1 | 418 | 4.0E-17 |
| sp|Q25452|CAC1M_MUSDO | Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1 | 2 | 431 | 6.0E-17 |
| sp|Q01815|CAC1C_MOUSE | Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus musculus GN=Cacna1c PE=1 SV=1 | 1 | 418 | 6.0E-17 |
| sp|Q02294|CAC1B_RAT | Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus norvegicus GN=Cacna1b PE=1 SV=1 | 12 | 431 | 7.0E-17 |
| sp|P27732|CAC1D_RAT | Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus norvegicus GN=Cacna1d PE=1 SV=2 | 5 | 418 | 7.0E-17 |
| sp|Q02343|CAC1E_RABIT | Voltage-dependent R-type calcium channel subunit alpha-1E OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1 | 144 | 418 | 4.0E-16 |
| sp|Q9EQ60|CAC1H_RAT | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus norvegicus GN=Cacna1h PE=2 SV=2 | 12 | 329 | 5.0E-16 |
| sp|P97445|CAC1A_MOUSE | Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Mus musculus GN=Cacna1a PE=1 SV=2 | 12 | 418 | 5.0E-16 |
| sp|P22002|CAC1C_RAT | Voltage-dependent L-type calcium channel subunit alpha-1C OS=Rattus norvegicus GN=Cacna1c PE=1 SV=1 | 1 | 418 | 5.0E-16 |
| sp|Q24270|CAC1D_DROME | Voltage-dependent calcium channel type D subunit alpha-1 OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2 | 8 | 431 | 8.0E-16 |
| sp|Q99246|CAC1D_MOUSE | Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus musculus GN=Cacna1d PE=1 SV=3 | 5 | 418 | 9.0E-16 |
| sp|O73700|CAC1D_CHICK | Voltage-dependent L-type calcium channel subunit alpha-1D OS=Gallus gallus GN=CACNA1D PE=2 SV=1 | 1 | 418 | 1.0E-15 |
| sp|P56698|CAC1B_DIPOM | Probable voltage-dependent N-type calcium channel subunit alpha-1B OS=Diplobatis ommata PE=2 SV=1 | 4 | 419 | 1.0E-15 |
| sp|Q15878|CAC1E_HUMAN | Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=1 SV=3 | 144 | 418 | 2.0E-15 |
| sp|Q01668|CAC1D_HUMAN | Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo sapiens GN=CACNA1D PE=1 SV=2 | 5 | 418 | 2.0E-15 |
| sp|O88427|CAC1H_MOUSE | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus musculus GN=Cacna1h PE=1 SV=3 | 12 | 329 | 2.0E-15 |
| sp|P54282|CAC1A_RAT | Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Rattus norvegicus GN=Cacna1a PE=1 SV=1 | 12 | 418 | 2.0E-15 |
| sp|O95180|CAC1H_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens GN=CACNA1H PE=1 SV=4 | 12 | 329 | 2.0E-15 |
| sp|Q07652|CAC1E_RAT | Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus norvegicus GN=Cacna1e PE=1 SV=1 | 144 | 418 | 4.0E-15 |
| sp|Q61290|CAC1E_MOUSE | Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus musculus GN=Cacna1e PE=1 SV=1 | 144 | 418 | 6.0E-15 |
| sp|Q9JIS7|CAC1F_MOUSE | Voltage-dependent L-type calcium channel subunit alpha-1F OS=Mus musculus GN=Cacna1f PE=1 SV=1 | 5 | 418 | 1.0E-14 |
| sp|P27884|CAC1A_RABIT | Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1 | 12 | 416 | 1.0E-14 |
| sp|O54898|CAC1G_RAT | Voltage-dependent T-type calcium channel subunit alpha-1G OS=Rattus norvegicus GN=Cacna1g PE=1 SV=2 | 12 | 380 | 1.0E-14 |
| sp|P22316|CAC1S_CYPCA | Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 OS=Cyprinus carpio PE=2 SV=1 | 5 | 418 | 2.0E-14 |
| sp|Q99244|CAC1D_MESAU | Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mesocricetus auratus GN=CACNA1D PE=2 SV=2 | 5 | 418 | 2.0E-14 |
| sp|O00555|CAC1A_HUMAN | Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Homo sapiens GN=CACNA1A PE=1 SV=2 | 12 | 416 | 3.0E-14 |
| sp|P56699|CAC1E_DIPOM | Probable voltage-dependent R-type calcium channel subunit alpha-1E OS=Diplobatis ommata PE=2 SV=1 | 12 | 418 | 3.0E-14 |
| sp|Q13936|CAC1C_HUMAN | Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo sapiens GN=CACNA1C PE=1 SV=4 | 1 | 418 | 1.0E-13 |
| sp|O60840|CAC1F_HUMAN | Voltage-dependent L-type calcium channel subunit alpha-1F OS=Homo sapiens GN=CACNA1F PE=1 SV=2 | 9 | 418 | 1.0E-13 |
| sp|Q13698|CAC1S_HUMAN | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo sapiens GN=CACNA1S PE=1 SV=4 | 12 | 418 | 5.0E-13 |
| sp|Q9P0X4|CAC1I_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1I OS=Homo sapiens GN=CACNA1I PE=1 SV=1 | 12 | 378 | 6.0E-13 |
| sp|P07293|CAC1S_RABIT | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1 | 2 | 418 | 6.0E-13 |
| sp|Q02789|CAC1S_MOUSE | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus GN=Cacna1s PE=1 SV=2 | 2 | 418 | 1.0E-12 |
| sp|Q02485|CAC1S_RAT | Voltage-dependent L-type calcium channel subunit alpha-1S (Fragment) OS=Rattus norvegicus GN=Cacna1s PE=1 SV=1 | 2 | 418 | 2.0E-12 |
| sp|Q9Z0Y8|CAC1I_RAT | Voltage-dependent T-type calcium channel subunit alpha-1I OS=Rattus norvegicus GN=Cacna1i PE=1 SV=3 | 12 | 378 | 2.0E-12 |
| sp|Q24270|CAC1D_DROME | Voltage-dependent calcium channel type D subunit alpha-1 OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2 | 13 | 383 | 5.0E-12 |
| sp|Q25452|CAC1M_MUSDO | Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1 | 13 | 329 | 6.0E-11 |
| sp|Q13698|CAC1S_HUMAN | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo sapiens GN=CACNA1S PE=1 SV=4 | 14 | 402 | 9.0E-11 |
| sp|O54898|CAC1G_RAT | Voltage-dependent T-type calcium channel subunit alpha-1G OS=Rattus norvegicus GN=Cacna1g PE=1 SV=2 | 129 | 388 | 1.0E-10 |
| sp|O43497|CAC1G_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1G OS=Homo sapiens GN=CACNA1G PE=2 SV=3 | 129 | 388 | 2.0E-10 |
| sp|Q01118|SCN7A_HUMAN | Sodium channel protein type 7 subunit alpha OS=Homo sapiens GN=SCN7A PE=1 SV=2 | 9 | 418 | 2.0E-09 |
| sp|Q02789|CAC1S_MOUSE | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus GN=Cacna1s PE=1 SV=2 | 14 | 327 | 3.0E-09 |
| sp|P07293|CAC1S_RABIT | Voltage-dependent L-type calcium channel subunit alpha-1S OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1 | 14 | 327 | 1.0E-08 |
| sp|O73707|CAC1C_CHICK | Voltage-dependent L-type calcium channel subunit alpha-1C (Fragment) OS=Gallus gallus GN=CACNA1C PE=2 SV=1 | 246 | 378 | 5.0E-08 |
| sp|O95180|CAC1H_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens GN=CACNA1H PE=1 SV=4 | 73 | 387 | 8.0E-08 |
| sp|O73706|CAC1B_CHICK | Voltage-dependent N-type calcium channel subunit alpha-1B (Fragment) OS=Gallus gallus GN=CACNA1B PE=2 SV=1 | 278 | 378 | 4.0E-07 |
| sp|O43497|CAC1G_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1G OS=Homo sapiens GN=CACNA1G PE=2 SV=3 | 144 | 380 | 6.0E-07 |
| sp|O73705|CAC1A_CHICK | Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Fragment) OS=Gallus gallus GN=CACNA1A PE=2 SV=1 | 303 | 378 | 8.0E-07 |
| sp|Q9EQ60|CAC1H_RAT | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus norvegicus GN=Cacna1h PE=2 SV=2 | 139 | 388 | 4.0E-06 |
| sp|O42398|CAC1S_CHICK | Voltage-dependent L-type calcium channel subunit alpha-1S (Fragment) OS=Gallus gallus GN=CACNA1S PE=2 SV=1 | 177 | 329 | 4.0E-06 |
| sp|O88427|CAC1H_MOUSE | Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus musculus GN=Cacna1h PE=1 SV=3 | 97 | 388 | 5.0E-06 |
| sp|O43497|CAC1G_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1G OS=Homo sapiens GN=CACNA1G PE=2 SV=3 | 12 | 85 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0005216 | ion channel activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006811 | ion transport | Yes |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0015267 | channel activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 140 | 157 | 17 |
| 3 | 172 | 194 | 22 |
| 4 | 201 | 223 | 22 |
| 5 | 261 | 283 | 22 |
| 6 | 357 | 379 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1560 MLAPRVASNPYFDFDDFGSSLFTLFQIVSQEGWTDVSFAAQSIVGKGMQPKDLIAQGNAMFFVVFNLLATVFVLT LFISVFMRNYTEQTGVAFLTAEQRSWLELRKLLRHISPSKSSYRDTEKAWKKWCHKRAIEKRGKWYQAITAVLVL HLLLLVAEFRSEPRWWSETRTFVFLFFILIYVSNMAVRITGLGWTRFRRSSWDLYSLVTVSGAFVATMALLTTTN RPNDTYTQLHKFFLVAIVLLLIPRNDALDQLFKTAAASLTVIGNLLATWLVFFLVFAIAMTQAFSLTRFGGEASS NINFRSVPKALILLFRMSLGEGWNKIMEDYADIEPPLCVEQDKFFDSDCGSKAWARFLFVSWNIVSMYIFVNLFV SLIYESFSYVYQRSSGVAVVDRDEIRRFKEAWRSVDPAGTGFISKESFPRLLGELSGVFQMRIYEPEDSVHRILD DVRDDAQTSRHMSIGTSGAKGDIDIGKLNRRLALLDVDNIRERRRRFKIFFGEVLASADPDKGIAFADVLMILAH YNIINDSKSLKLEEFLRRRARLQRVDEEIRRKVVQGFFDTLYWTRKFKKHMERKRASRMSEVPELAIPDILPKQD NTARHTNTL* |
| Coding | >Hirsu2|1560 ATGCTGGCTCCTCGCGTGGCGTCGAACCCCTACTTCGACTTTGACGATTTTGGGTCATCGCTTTTCACCCTTTTC CAAATTGTCAGCCAGGAGGGATGGACGGACGTGTCATTCGCCGCACAAAGCATTGTGGGGAAAGGGATGCAACCT AAAGATCTAATTGCTCAAGGCAACGCCATGTTCTTCGTTGTGTTCAACCTCCTTGCGACAGTTTTCGTCCTCACC CTATTCATTTCGGTCTTCATGAGAAACTACACGGAGCAAACAGGCGTTGCCTTTCTCACCGCGGAGCAACGATCG TGGCTGGAATTGCGGAAACTCCTACGCCACATCTCGCCGTCGAAGAGCTCGTACCGCGACACCGAAAAGGCCTGG AAGAAGTGGTGCCACAAAAGAGCCATCGAGAAACGAGGCAAATGGTATCAGGCCATCACGGCCGTGCTCGTTCTG CACCTACTTCTGCTAGTGGCAGAATTCAGGTCAGAGCCGAGATGGTGGTCGGAGACGCGTACCTTTGTATTCCTG TTCTTCATTCTCATCTATGTGAGCAACATGGCGGTCCGAATCACCGGTCTCGGGTGGACTCGCTTCCGACGGAGC TCTTGGGACCTGTACTCTCTGGTAACAGTGTCCGGAGCTTTCGTGGCAACCATGGCCCTCCTCACTACGACGAAC AGACCCAATGACACATATACCCAGCTTCACAAATTCTTCCTCGTCGCCATCGTTCTGTTATTGATCCCTCGGAAT GACGCTTTAGACCAGCTTTTCAAGACCGCTGCAGCAAGTTTAACGGTCATTGGTAATCTGCTGGCAACCTGGCTA GTCTTCTTCCTCGTCTTTGCCATCGCCATGACTCAGGCTTTCAGCTTGACGCGATTTGGGGGAGAGGCGAGCTCC AACATCAACTTCCGAAGCGTCCCAAAAGCACTGATTCTTCTATTCCGGATGAGTCTCGGTGAAGGCTGGAACAAG ATCATGGAAGATTATGCCGACATTGAACCCCCACTGTGCGTCGAACAAGACAAGTTCTTCGACAGCGACTGCGGC AGCAAGGCCTGGGCAAGATTTTTGTTCGTCTCGTGGAACATAGTGAGCATGTACATCTTTGTGAACCTCTTCGTC TCTCTCATTTATGAGAGCTTCAGTTACGTCTACCAGCGCTCCAGCGGCGTAGCGGTCGTTGACAGGGACGAAATC AGGCGGTTCAAAGAAGCTTGGAGGAGCGTGGACCCGGCCGGGACGGGCTTCATCTCGAAAGAGTCGTTCCCGCGT CTCCTGGGAGAGTTGTCGGGCGTCTTTCAGATGCGTATATATGAGCCGGAAGACTCAGTACACCGGATCCTCGAC GACGTACGGGACGACGCCCAGACGTCAAGGCACATGTCAATCGGGACATCCGGTGCAAAAGGCGACATTGACATC GGCAAGTTAAACAGACGATTGGCCTTGCTGGATGTGGACAATATCCGAGAACGACGGCGGCGGTTCAAGATCTTT TTCGGGGAAGTTTTGGCATCCGCCGATCCGGACAAGGGCATCGCCTTTGCCGACGTGTTGATGATTCTCGCGCAT TACAACATCATCAACGATAGCAAAAGCCTCAAGCTCGAGGAATTTCTGCGCAGGCGAGCGCGATTGCAGCGTGTT GACGAGGAAATACGGCGCAAGGTTGTTCAGGGATTCTTCGACACGCTATACTGGACGAGGAAGTTCAAAAAGCAT ATGGAGCGTAAACGCGCGTCGCGGATGTCAGAGGTGCCGGAGCTGGCCATTCCAGATATTCTGCCGAAACAGGAC AACACGGCGCGGCATACCAACACCCTCTGA |
| Transcript | >Hirsu2|1560 ATGCTGGCTCCTCGCGTGGCGTCGAACCCCTACTTCGACTTTGACGATTTTGGGTCATCGCTTTTCACCCTTTTC CAAATTGTCAGCCAGGAGGGATGGACGGACGTGTCATTCGCCGCACAAAGCATTGTGGGGAAAGGGATGCAACCT AAAGATCTAATTGCTCAAGGCAACGCCATGTTCTTCGTTGTGTTCAACCTCCTTGCGACAGTTTTCGTCCTCACC CTATTCATTTCGGTCTTCATGAGAAACTACACGGAGCAAACAGGCGTTGCCTTTCTCACCGCGGAGCAACGATCG TGGCTGGAATTGCGGAAACTCCTACGCCACATCTCGCCGTCGAAGAGCTCGTACCGCGACACCGAAAAGGCCTGG AAGAAGTGGTGCCACAAAAGAGCCATCGAGAAACGAGGCAAATGGTATCAGGCCATCACGGCCGTGCTCGTTCTG CACCTACTTCTGCTAGTGGCAGAATTCAGGTCAGAGCCGAGATGGTGGTCGGAGACGCGTACCTTTGTATTCCTG TTCTTCATTCTCATCTATGTGAGCAACATGGCGGTCCGAATCACCGGTCTCGGGTGGACTCGCTTCCGACGGAGC TCTTGGGACCTGTACTCTCTGGTAACAGTGTCCGGAGCTTTCGTGGCAACCATGGCCCTCCTCACTACGACGAAC AGACCCAATGACACATATACCCAGCTTCACAAATTCTTCCTCGTCGCCATCGTTCTGTTATTGATCCCTCGGAAT GACGCTTTAGACCAGCTTTTCAAGACCGCTGCAGCAAGTTTAACGGTCATTGGTAATCTGCTGGCAACCTGGCTA GTCTTCTTCCTCGTCTTTGCCATCGCCATGACTCAGGCTTTCAGCTTGACGCGATTTGGGGGAGAGGCGAGCTCC AACATCAACTTCCGAAGCGTCCCAAAAGCACTGATTCTTCTATTCCGGATGAGTCTCGGTGAAGGCTGGAACAAG ATCATGGAAGATTATGCCGACATTGAACCCCCACTGTGCGTCGAACAAGACAAGTTCTTCGACAGCGACTGCGGC AGCAAGGCCTGGGCAAGATTTTTGTTCGTCTCGTGGAACATAGTGAGCATGTACATCTTTGTGAACCTCTTCGTC TCTCTCATTTATGAGAGCTTCAGTTACGTCTACCAGCGCTCCAGCGGCGTAGCGGTCGTTGACAGGGACGAAATC AGGCGGTTCAAAGAAGCTTGGAGGAGCGTGGACCCGGCCGGGACGGGCTTCATCTCGAAAGAGTCGTTCCCGCGT CTCCTGGGAGAGTTGTCGGGCGTCTTTCAGATGCGTATATATGAGCCGGAAGACTCAGTACACCGGATCCTCGAC GACGTACGGGACGACGCCCAGACGTCAAGGCACATGTCAATCGGGACATCCGGTGCAAAAGGCGACATTGACATC GGCAAGTTAAACAGACGATTGGCCTTGCTGGATGTGGACAATATCCGAGAACGACGGCGGCGGTTCAAGATCTTT TTCGGGGAAGTTTTGGCATCCGCCGATCCGGACAAGGGCATCGCCTTTGCCGACGTGTTGATGATTCTCGCGCAT TACAACATCATCAACGATAGCAAAAGCCTCAAGCTCGAGGAATTTCTGCGCAGGCGAGCGCGATTGCAGCGTGTT GACGAGGAAATACGGCGCAAGGTTGTTCAGGGATTCTTCGACACGCTATACTGGACGAGGAAGTTCAAAAAGCAT ATGGAGCGTAAACGCGCGTCGCGGATGTCAGAGGTGCCGGAGCTGGCCATTCCAGATATTCTGCCGAAACAGGAC AACACGGCGCGGCATACCAACACCCTCTGA |
| Gene | >Hirsu2|1560 ATGCTGGCTCCTCGCGTGGCGTCGAACCCCTACTTCGACTTTGACGATTTTGGGTCATCGCTTTTCACCCTTTTC CAAATTGTCAGCCAGGAGGGATGGACGGACGTGTCATTCGCCGCACAAAGCATTGTGGGGAAAGGGATGCAACCT AAAGATCTAATTGCTCAAGGCAACGCCATGTTCTTCGTTGTGTTCAACCTCCTTGCGACAGTTTTCGTCCTCACC CTATTCATTTCGGTCTTCATGAGAAACTACACGGAGCAAACAGGCGTTGCCTTTCTCACCGCGGAGCAACGATCG TGGCTGGAATTGCGGAAACTCCTACGCCACATCTCGCCGTCGAAGAGCTCGTACCGCGACACCGAAAAGGCCTGG AAGAAGTGGTGCCACAAAAGAGCCATCGAGAAACGAGGCAAATGGTATCAGGCCATCACGGCCGTGCTCGTTCTG CACCTACTTCTGCTAGTGGCAGAATTCAGGTCAGAGCCGAGATGGTGGTCGGAGACGCGTACCTTTGTATTCCTG TTCTTCATTCTCATCTATGTGAGCAACATGGCGGTCCGAATCACCGGTCTCGGGTGGACTCGCTTCCGACGGAGC TCTTGGGACCTGTACTCTCTGGTAACAGTGTCCGGAGCTTTCGTGGCAACCATGGCCCTCCTCACTACGACGAAC AGACCCAATGACACATATACCCAGCTTCACAAATTCTTCCTCGTCGCCATCGTTCTGTTATTGATCCCTCGGAAT GACGCTTTAGACCAGCTTTTCAAGACCGCTGCAGCAAGTTTAACGGTCATTGGTAATCTGCTGGCAACCTGGCTA GTCTTCTTCCTCGTCTTTGCCATCGCCATGACTCAGGCTTTCAGCTTGACGCGATTTGGGGGAGAGGCGAGCTCC AACATCAACTTCCGAAGCGTCCCAAAAGCACTGATTCTTCTATTCCGGATGAGTCTCGGTGAAGGCTGGAACAAG ATCATGGAAGATTATGCCGACATTGAACCCCCACTGTGCGTCGAACAAGACAAGTTCTTCGACAGCGACTGCGGC AGCAAGGCCTGGGCAAGATTTTTGTTCGTCTCGTGGAACATAGTGAGCATGTACATCTTTGTGAACCTCTTCGTC TCTCTCATTTATGAGAGCTTCAGTTACGTCTACCAGCGCTCCAGCGGCGTAGCGGTCGTTGACAGGGACGAAATC AGGCGGTTCAAAGAAGCTTGGAGGAGCGTGGACCCGGCCGGGACGGGCTTCATCTCGAAAGAGTCGTTCCCGCGT CTCCTGGGAGAGTTGTCGGGCGTCTTTCAGATGCGTATATATGAGCCGGAAGACTCAGTACACCGGATCCTCGAC GACGTACGGGACGACGCCCAGACGTCAAGGCACATGTCAATCGGGACATCCGGTGCAAAAGGCGACATTGACATC GGCAAGTTAAACAGACGATTGGCCTTGCTGGATGTGGACAATATCCGAGAACGACGGCGGCGGTTCAAGATCTTT TTCGGGGAAGTTTTGGCATCCGCCGATCCGGACAAGGGCATCGCCTTTGCCGACGTGTTGATGATTCTCGCGCAT TACAACATCATCAACGATAGCAAAAGCCTCAAGTACGTCGGAAGACCCCGTCTCCCTTGCCAGCTGTCGGGCTCC AATTGGCTGCCCGCTCCCCGCCCTCGGAGCCTAAGCGTGGACGAGCAACTGACGGTTCTTTCCAGGCTCGAGGAA TTTCTGCGCAGGCGAGCGCGATTGCAGCGTGTTGACGAGGAAATACGGCGCAAGGTTGTTCAGGGATTCTTCGAC ACGCTGTGAGTCTATGACATTGAGACGTACGGGCGCGAGCAAAGCCGATCTGACTGGGTACGCGGCAGATACTGG ACGAGGAAGTTCAAAAAGCATATGGAGCGTAAACGCGCGTCGCGGATGTCAGAGGTGCCGGAGCTGGCCATTCCA GATATTCTGGTAGACGAGAACAGCGGTGACGGGGAAAGCCGGAAGTCGTTCAAGCCCGACGAAGGATTGACGACG CGGTGGACGCACCTTAGCATCGGGGAAGGGGTGGGGCAAGAGACGCGGACCGGCAAACCAGCCGAAACAGGACAA CACGGCGCGGCATACCAACACCCTCTGA |