© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|155 |
| Gene name | |
| Location | Contig_1025:5796..6977 |
| Strand | - |
| Gene length (bp) | 1181 |
| Transcript length (bp) | 996 |
| Coding sequence length (bp) | 996 |
| Protein length (aa) | 332 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5595 | 0.5786 | 0.4181 | 0.0824 | 0.1364 | 0.1111 | 0.1276 | 0.1209 | 0.1297 | 0.0286 |
| Orthofinder run ID | 4 |
| Orthogroup | 8850 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|155 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|155 MARNPTLRRRSEPAAESYSSRLGSASAHPERGCKGEKHLIHLIRKAALDLLFSELQSQTRQYPALVSDTRWDRNT KRITTTTAEDDEDGPSTSQDGGGMETRSRVTTTVPEDALGPQQYAWPLTRQVSAVAARQTRTAMLGSRISCASHG YPERARKAKGRSGVGSPERTNAGDAEAGETILTPIPTASCWLSSPAELSNRCRRLWLGRTSDRCPPSAAVHFKLE PRSVPPRRRGRRWGLPSGEETNIGAEERGKKETSSRRRQGKGAALSRPRGSPVRLARPGLPTLAADPCTHLKIYR SSRPLEPLPVRDRRGGVLVDTGSEPVQVDPA* |
| Coding | >Hirsu2|155 ATGGCTCGCAATCCCACCCTGCGTCGCCGGTCCGAGCCGGCCGCTGAGAGCTATTCCTCTCGTCTCGGCAGTGCG TCCGCGCATCCGGAAAGAGGATGCAAAGGGGAGAAACACTTGATTCACCTTATCCGCAAGGCTGCTCTTGATCTG CTGTTTTCCGAGCTTCAATCCCAGACACGGCAATATCCCGCACTAGTATCAGACACGAGGTGGGATAGAAACACG AAGCGGATTACAACGACGACAGCAGAAGATGACGAAGATGGACCCAGCACTAGTCAGGACGGAGGTGGGATGGAA ACACGCAGCCGGGTCACAACGACAGTGCCAGAAGATGCACTCGGACCTCAACAGTACGCCTGGCCGCTGACTCGC CAGGTGAGCGCGGTTGCCGCCAGGCAGACACGGACGGCCATGCTTGGTTCTCGTATATCATGCGCTTCCCACGGC TACCCTGAGCGCGCGCGCAAAGCCAAGGGCCGCTCGGGCGTGGGCAGCCCCGAACGCACCAACGCGGGGGATGCC GAGGCGGGTGAGACGATCCTGACCCCCATTCCCACAGCCTCGTGCTGGCTGAGCTCTCCCGCCGAGCTTTCGAAT CGGTGCCGGCGGCTGTGGCTTGGGCGGACGTCCGACCGTTGTCCCCCCTCGGCGGCCGTTCACTTCAAGCTCGAA CCTCGGAGCGTTCCGCCTCGCCGCCGCGGCCGCCGTTGGGGTTTGCCGAGCGGGGAGGAGACTAACATTGGGGCC GAGGAGAGGGGGAAAAAGGAAACTTCGTCTCGACGCCGCCAAGGGAAAGGGGCCGCTCTCTCTCGCCCGCGCGGT TCGCCCGTTCGACTGGCTCGTCCTGGTCTCCCGACTCTAGCTGCCGATCCATGCACGCACCTCAAAATCTACCGG TCATCCCGCCCGCTAGAGCCGCTTCCAGTCCGAGACCGAAGAGGGGGGGTCCTTGTAGATACAGGAAGCGAACCC GTCCAAGTCGATCCGGCTTGA |
| Transcript | >Hirsu2|155 ATGGCTCGCAATCCCACCCTGCGTCGCCGGTCCGAGCCGGCCGCTGAGAGCTATTCCTCTCGTCTCGGCAGTGCG TCCGCGCATCCGGAAAGAGGATGCAAAGGGGAGAAACACTTGATTCACCTTATCCGCAAGGCTGCTCTTGATCTG CTGTTTTCCGAGCTTCAATCCCAGACACGGCAATATCCCGCACTAGTATCAGACACGAGGTGGGATAGAAACACG AAGCGGATTACAACGACGACAGCAGAAGATGACGAAGATGGACCCAGCACTAGTCAGGACGGAGGTGGGATGGAA ACACGCAGCCGGGTCACAACGACAGTGCCAGAAGATGCACTCGGACCTCAACAGTACGCCTGGCCGCTGACTCGC CAGGTGAGCGCGGTTGCCGCCAGGCAGACACGGACGGCCATGCTTGGTTCTCGTATATCATGCGCTTCCCACGGC TACCCTGAGCGCGCGCGCAAAGCCAAGGGCCGCTCGGGCGTGGGCAGCCCCGAACGCACCAACGCGGGGGATGCC GAGGCGGGTGAGACGATCCTGACCCCCATTCCCACAGCCTCGTGCTGGCTGAGCTCTCCCGCCGAGCTTTCGAAT CGGTGCCGGCGGCTGTGGCTTGGGCGGACGTCCGACCGTTGTCCCCCCTCGGCGGCCGTTCACTTCAAGCTCGAA CCTCGGAGCGTTCCGCCTCGCCGCCGCGGCCGCCGTTGGGGTTTGCCGAGCGGGGAGGAGACTAACATTGGGGCC GAGGAGAGGGGGAAAAAGGAAACTTCGTCTCGACGCCGCCAAGGGAAAGGGGCCGCTCTCTCTCGCCCGCGCGGT TCGCCCGTTCGACTGGCTCGTCCTGGTCTCCCGACTCTAGCTGCCGATCCATGCACGCACCTCAAAATCTACCGG TCATCCCGCCCGCTAGAGCCGCTTCCAGTCCGAGACCGAAGAGGGGGGGTCCTTGTAGATACAGGAAGCGAACCC GTCCAAGTCGATCCGGCTTGA |
| Gene | >Hirsu2|155 ATGGCTCGCAATCCCACCCTGCGTCGCCGGTCCGAGCCGGCCGCTGAGAGCTATTCCTCTCGTCTCGGCAGTGCG TCCGCGCATCCGGAAAGAGGATGCAAAGGGGAGAAACACTTGATTCACCTTATCCGCAAGGCTGCTCTTGATCTG CTGTTTTCCGAGCTTCAATCCCAGACACGGCAATGTGAGTCTTGATCATGTCTCGATCTCGTGTCGATGGCCTGC GTTGACGATGATAGATCCCGCACTAGTATCAGACACGAGGTGGGATAGAAACACGAAGCGGATTACAACGACGAC AGCAGAAGATGACGAAGATGGACCCAGCACTAGTCAGGACGGAGGTGGGATGGAAACACGCAGCCGGGTCACAAC GACAGTGCCAGAAGATGCACTCGGACCTCAACAGTACGCCTGGCCGCTGACTCGCCAGGTGAGCGCGGTTGCCGC CAGGCAGACACGGACGGCCATGCTTGGTTCTCGTATATCATGCGCTTCCCACGGCTACCCTGAGCGCGCGCGCAA AGCCAAGGGCCGCTCGGGCGTGGGCAGCCCCGAACGCACCAACGCGGGGGATGCCGAGGCGGGTGAGACGATCCT GACCCCCATTCCCACAGCCTCGTGCTGGCTGAGCTCTCCCGCCGAGCTTTCGAATCGGTGCCGGCGGCTGTGGCT TGGGCGGGTGGGATAGCGGGACACGTCAAGGGATGGGTAAGCCCATTGAGCGGACGTGCCACGCATGTCCGCACA GACGTCCGACCGTTGTCCCCCCTCGGCGGCCGTTCACTTCAAGCTCGAACCTCGGAGCGTTCCGCCTCGCCGCCG CGGCCGCCGTTGGGGTTTGCCGAGCGGGGAGGAGACTAACATTGGGGCCGAGGAGAGGGGGAAAAAGGAAACTTC GTCTCGACGCCGCCAAGGGAAAGGGGCCGCTCTCTCTCGCCCGCGCGGTTCGCCCGTTCGACTGGCTCGTCCTGG TCTCCCGACTCTAGCTGCCGATCCATGCACGCACCTCAAAATCTACCGGTCATCCCGCCCGCTAGAGCCGCTTCC AGTCCGAGACCGAAGAGGGGGGGTCCTTGTAGATACAGTACGTTAGTGCCGTCTTAGCAAGCGGGGGAGAGGGAG CCCGGGGATCTGACAGGACGCAGGGAAGCGAACCCGTCCAAGTCGATCCGGCTTGA |