© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1546 |
| Gene name | |
| Location | Contig_1344:3145..5130 |
| Strand | - |
| Gene length (bp) | 1985 |
| Transcript length (bp) | 1656 |
| Coding sequence length (bp) | 1656 |
| Protein length (aa) | 552 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11786 | Aft1_HRA | Aft1 HRA domain | 2.3E-24 | 124 | 195 |
| PF11787 | Aft1_HRR | Aft1 HRR domain | 1.2E-08 | 201 | 257 |
| PF11787 | Aft1_HRR | Aft1 HRR domain | 3.8E-16 | 256 | 303 |
| PF11785 | Aft1_OSA | Aft1 osmotic stress response (OSM) domain | 1.8E-20 | 45 | 101 |
| PF00170 | bZIP_1 | bZIP transcription factor | 5.5E-11 | 438 | 494 |
| PF07716 | bZIP_2 | Basic region leucine zipper | 1.5E-05 | 444 | 488 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P52890|ATF1_SCHPO | Transcription factor atf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atf1 PE=1 SV=1 | 434 | 506 | 8.0E-32 |
| sp|Q5R9C9|ATF7_PONAB | Cyclic AMP-dependent transcription factor ATF-7 OS=Pongo abelii GN=ATF7 PE=2 SV=1 | 427 | 508 | 2.0E-20 |
| sp|P17544|ATF7_HUMAN | Cyclic AMP-dependent transcription factor ATF-7 OS=Homo sapiens GN=ATF7 PE=1 SV=2 | 427 | 508 | 2.0E-20 |
| sp|Q8R0S1|ATF7_MOUSE | Cyclic AMP-dependent transcription factor ATF-7 OS=Mus musculus GN=Atf7 PE=2 SV=1 | 427 | 508 | 3.0E-20 |
| sp|P16951|ATF2_MOUSE | Cyclic AMP-dependent transcription factor ATF-2 OS=Mus musculus GN=Atf2 PE=1 SV=2 | 436 | 513 | 8.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P52890|ATF1_SCHPO | Transcription factor atf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atf1 PE=1 SV=1 | 434 | 506 | 8.0E-32 |
| sp|Q5R9C9|ATF7_PONAB | Cyclic AMP-dependent transcription factor ATF-7 OS=Pongo abelii GN=ATF7 PE=2 SV=1 | 427 | 508 | 2.0E-20 |
| sp|P17544|ATF7_HUMAN | Cyclic AMP-dependent transcription factor ATF-7 OS=Homo sapiens GN=ATF7 PE=1 SV=2 | 427 | 508 | 2.0E-20 |
| sp|Q8R0S1|ATF7_MOUSE | Cyclic AMP-dependent transcription factor ATF-7 OS=Mus musculus GN=Atf7 PE=2 SV=1 | 427 | 508 | 3.0E-20 |
| sp|P16951|ATF2_MOUSE | Cyclic AMP-dependent transcription factor ATF-2 OS=Mus musculus GN=Atf2 PE=1 SV=2 | 436 | 513 | 8.0E-20 |
| sp|Q00969|ATF2_RAT | Cyclic AMP-dependent transcription factor ATF-2 OS=Rattus norvegicus GN=Atf2 PE=1 SV=2 | 436 | 513 | 9.0E-20 |
| sp|O93602|ATF2_CHICK | Cyclic AMP-dependent transcription factor ATF-2 OS=Gallus gallus GN=ATF2 PE=2 SV=1 | 425 | 513 | 1.0E-19 |
| sp|P15336|ATF2_HUMAN | Cyclic AMP-dependent transcription factor ATF-2 OS=Homo sapiens GN=ATF2 PE=1 SV=4 | 436 | 513 | 1.0E-19 |
| sp|Q8K1L0|CREB5_MOUSE | Cyclic AMP-responsive element-binding protein 5 OS=Mus musculus GN=Creb5 PE=2 SV=3 | 427 | 508 | 1.0E-18 |
| sp|Q02930|CREB5_HUMAN | Cyclic AMP-responsive element-binding protein 5 OS=Homo sapiens GN=CREB5 PE=1 SV=3 | 427 | 508 | 4.0E-18 |
| sp|P78962|ATF21_SCHPO | Transcription factor atf21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atf21 PE=3 SV=1 | 438 | 502 | 4.0E-16 |
| sp|Q09771|ATF31_SCHPO | Transcription factor atf31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atf31 PE=3 SV=1 | 422 | 506 | 1.0E-14 |
| sp|Q59VR1|SKO1_CANAL | Transcriptional regulator SKO1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SKO1 PE=1 SV=1 | 433 | 493 | 3.0E-11 |
| sp|Q09926|PCR1_SCHPO | Transcription factor pcr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pcr1 PE=1 SV=1 | 429 | 517 | 8.0E-09 |
| sp|Q02100|SKO1_YEAST | CRE-binding bZIP protein SKO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKO1 PE=1 SV=1 | 436 | 485 | 4.0E-08 |
| sp|P18870|JUN_CHICK | Transcription factor AP-1 OS=Gallus gallus GN=JUN PE=1 SV=2 | 429 | 510 | 7.0E-07 |
| sp|P12981|JUN_COTJA | Transcription factor AP-1 OS=Coturnix coturnix japonica GN=JUN PE=2 SV=1 | 429 | 510 | 8.0E-07 |
| sp|P54864|JUN_SERCA | Transcription factor AP-1 OS=Serinus canaria GN=JUN PE=2 SV=1 | 429 | 510 | 9.0E-07 |
| sp|P05412|JUN_HUMAN | Transcription factor AP-1 OS=Homo sapiens GN=JUN PE=1 SV=2 | 429 | 510 | 1.0E-06 |
| sp|P05627|JUN_MOUSE | Transcription factor AP-1 OS=Mus musculus GN=Jun PE=1 SV=3 | 429 | 510 | 1.0E-06 |
| sp|P56432|JUN_PIG | Transcription factor AP-1 OS=Sus scrofa GN=JUN PE=2 SV=1 | 429 | 510 | 1.0E-06 |
| sp|P17325|JUN_RAT | Transcription factor AP-1 OS=Rattus norvegicus GN=Jun PE=1 SV=1 | 429 | 510 | 1.0E-06 |
| sp|O77627|JUN_BOVIN | Transcription factor AP-1 OS=Bos taurus GN=JUN PE=2 SV=2 | 429 | 510 | 1.0E-06 |
| sp|P17535|JUND_HUMAN | Transcription factor jun-D OS=Homo sapiens GN=JUND PE=1 SV=3 | 429 | 499 | 2.0E-06 |
| sp|P52909|JUND_RAT | Transcription factor jun-D OS=Rattus norvegicus GN=Jund PE=1 SV=1 | 429 | 499 | 2.0E-06 |
| sp|P15066|JUND_MOUSE | Transcription factor jun-D OS=Mus musculus GN=Jund PE=1 SV=1 | 429 | 499 | 2.0E-06 |
| sp|P27921|JUND_CHICK | Transcription factor jun-D OS=Gallus gallus GN=JUND PE=3 SV=1 | 429 | 501 | 2.0E-06 |
| sp|A7YY54|JUND_BOVIN | Transcription factor jun-D OS=Bos taurus GN=JUND PE=2 SV=1 | 429 | 499 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0003700 | DNA-binding transcription factor activity | Yes |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0065007 | biological regulation | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0080090 | regulation of primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| bZIP |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1546 MGTSPTIASARGQSKSPKPSSNTPPRQDSTVDAKADSTGKLDGPSNAEAAKPLAPPPRPGQPQPQQGSNTPDFFA PQVGGSLSLEPNPFEQSFGGGGPETPGGTKLPSVAALTSPSSLLPGSNATPFNWGGGSLRTGPLSPAMLSGPAND YFSDTHHLRGGFPTPNESSLRSGLTPGGSGSMFPAPSPNSQALFAQLASGGATPSTLDFHRTALSAAAKRDQTGG GQQQGQPQQQPPPQPQQQPQQPPPPQQQPPPPQQAATSQPHDMPNGASAVKPEAKHGPGPFDPHDNDAANGLFML AQGAQGRSGNQSSGQFPTPSASSHAHPAPETPQNAEMSPQMSSAHAASIDSGRGGSEGSLLSDDGEQTRPAIRGK SKKGSSASLGRRKAEDAPAKAPPSKKAKGSNGSIMNGSFDFSDDDMKKLDEGGSKSKMTDEEKRKNFLERNRVAA LKCRQRKKQWLANLQSKVEMYSSENDALTAQITQLREEVVNLKTLLLAHKDCPVTQQQGLHGAFMSQVVEPFNAQ MNPYGMAGPMPNQQVMAGQGVQRRFS* |
| Coding | >Hirsu2|1546 ATGGGGACTTCTCCCACCATCGCCTCTGCCCGAGGTCAGTCGAAGTCCCCCAAGCCGTCGAGCAACACGCCCCCT CGCCAAGATTCTACGGTAGACGCCAAAGCCGATTCCACGGGCAAGCTCGACGGCCCGTCCAATGCCGAAGCTGCC AAACCGCTCGCGCCGCCGCCTCGACCCGGTCAACCACAACCGCAACAGGGCTCCAACACGCCCGACTTTTTCGCG CCTCAAGTCGGCGGATCCCTCAGTCTGGAGCCCAATCCCTTCGAGCAGTCTTTTGGGGGCGGAGGCCCAGAGACC CCTGGAGGCACGAAGCTCCCCTCCGTCGCCGCGCTGACGTCGCCCTCGTCGCTGCTGCCCGGCAGCAACGCCACT CCTTTCAACTGGGGCGGAGGATCGCTGCGTACCGGCCCGCTGAGCCCTGCCATGTTGTCGGGACCGGCCAACGAT TACTTCAGCGACACACATCACCTCCGAGGCGGCTTCCCGACACCCAACGAATCGTCCCTCAGATCCGGGCTCACG CCGGGCGGCAGCGGGTCCATGTTCCCGGCCCCGAGCCCCAACTCCCAGGCCCTCTTCGCCCAGCTCGCCAGCGGC GGCGCGACCCCCAGCACGCTCGATTTCCACCGCACAGCGCTGAGCGCCGCCGCCAAGCGCGATCAGACCGGCGGC GGCCAGCAACAGGGACAACCACAACAGCAGCCTCCGCCCCAACCGCAGCAGCAGCCGCAGCAGCCGCCGCCGCCC CAGCAGCAGCCGCCGCCGCCCCAGCAAGCGGCCACCTCCCAACCGCACGACATGCCAAACGGCGCGTCGGCGGTC AAGCCCGAAGCCAAGCACGGCCCCGGGCCCTTCGACCCTCATGATAACGACGCCGCCAACGGTCTCTTCATGCTC GCCCAGGGAGCCCAGGGCCGGAGCGGCAACCAGAGCTCAGGCCAGTTCCCGACCCCGTCCGCCTCCAGCCACGCC CACCCCGCTCCCGAAACGCCCCAGAACGCCGAGATGTCGCCGCAAATGTCGAGCGCCCACGCCGCATCCATCGAC TCGGGGCGAGGCGGGAGCGAAGGAAGCCTACTGTCGGATGACGGTGAGCAGACGAGACCGGCCATCAGGGGCAAG AGCAAAAAGGGCTCATCAGCCTCGCTCGGGCGGAGAAAAGCGGAGGACGCGCCAGCCAAGGCTCCGCCGAGTAAG AAAGCCAAGGGCAGCAACGGCAGCATCATGAACGGCAGCTTCGACTTCTCCGACGACGACATGAAGAAACTGGAT GAAGGAGGCTCCAAGTCCAAGATGACGGACGAGGAGAAGCGTAAGAACTTCCTTGAGAGGAATCGCGTCGCGGCA CTCAAGTGTCGGCAGCGAAAGAAACAATGGCTGGCGAACCTTCAGAGCAAAGTGGAGATGTACAGCAGTGAAAAC GATGCGCTGACAGCGCAGATCACTCAACTGCGCGAAGAGGTCGTCAACCTCAAAACGCTCCTGCTGGCCCACAAG GATTGCCCCGTCACCCAACAACAAGGTCTCCACGGCGCCTTCATGTCGCAAGTCGTGGAGCCATTCAATGCCCAA ATGAACCCATATGGAATGGCCGGTCCAATGCCCAATCAACAGGTCATGGCGGGCCAAGGTGTTCAGCGTCGATTC TCTTAG |
| Transcript | >Hirsu2|1546 ATGGGGACTTCTCCCACCATCGCCTCTGCCCGAGGTCAGTCGAAGTCCCCCAAGCCGTCGAGCAACACGCCCCCT CGCCAAGATTCTACGGTAGACGCCAAAGCCGATTCCACGGGCAAGCTCGACGGCCCGTCCAATGCCGAAGCTGCC AAACCGCTCGCGCCGCCGCCTCGACCCGGTCAACCACAACCGCAACAGGGCTCCAACACGCCCGACTTTTTCGCG CCTCAAGTCGGCGGATCCCTCAGTCTGGAGCCCAATCCCTTCGAGCAGTCTTTTGGGGGCGGAGGCCCAGAGACC CCTGGAGGCACGAAGCTCCCCTCCGTCGCCGCGCTGACGTCGCCCTCGTCGCTGCTGCCCGGCAGCAACGCCACT CCTTTCAACTGGGGCGGAGGATCGCTGCGTACCGGCCCGCTGAGCCCTGCCATGTTGTCGGGACCGGCCAACGAT TACTTCAGCGACACACATCACCTCCGAGGCGGCTTCCCGACACCCAACGAATCGTCCCTCAGATCCGGGCTCACG CCGGGCGGCAGCGGGTCCATGTTCCCGGCCCCGAGCCCCAACTCCCAGGCCCTCTTCGCCCAGCTCGCCAGCGGC GGCGCGACCCCCAGCACGCTCGATTTCCACCGCACAGCGCTGAGCGCCGCCGCCAAGCGCGATCAGACCGGCGGC GGCCAGCAACAGGGACAACCACAACAGCAGCCTCCGCCCCAACCGCAGCAGCAGCCGCAGCAGCCGCCGCCGCCC CAGCAGCAGCCGCCGCCGCCCCAGCAAGCGGCCACCTCCCAACCGCACGACATGCCAAACGGCGCGTCGGCGGTC AAGCCCGAAGCCAAGCACGGCCCCGGGCCCTTCGACCCTCATGATAACGACGCCGCCAACGGTCTCTTCATGCTC GCCCAGGGAGCCCAGGGCCGGAGCGGCAACCAGAGCTCAGGCCAGTTCCCGACCCCGTCCGCCTCCAGCCACGCC CACCCCGCTCCCGAAACGCCCCAGAACGCCGAGATGTCGCCGCAAATGTCGAGCGCCCACGCCGCATCCATCGAC TCGGGGCGAGGCGGGAGCGAAGGAAGCCTACTGTCGGATGACGGTGAGCAGACGAGACCGGCCATCAGGGGCAAG AGCAAAAAGGGCTCATCAGCCTCGCTCGGGCGGAGAAAAGCGGAGGACGCGCCAGCCAAGGCTCCGCCGAGTAAG AAAGCCAAGGGCAGCAACGGCAGCATCATGAACGGCAGCTTCGACTTCTCCGACGACGACATGAAGAAACTGGAT GAAGGAGGCTCCAAGTCCAAGATGACGGACGAGGAGAAGCGTAAGAACTTCCTTGAGAGGAATCGCGTCGCGGCA CTCAAGTGTCGGCAGCGAAAGAAACAATGGCTGGCGAACCTTCAGAGCAAAGTGGAGATGTACAGCAGTGAAAAC GATGCGCTGACAGCGCAGATCACTCAACTGCGCGAAGAGGTCGTCAACCTCAAAACGCTCCTGCTGGCCCACAAG GATTGCCCCGTCACCCAACAACAAGGTCTCCACGGCGCCTTCATGTCGCAAGTCGTGGAGCCATTCAATGCCCAA ATGAACCCATATGGAATGGCCGGTCCAATGCCCAATCAACAGGTCATGGCGGGCCAAGGTGTTCAGCGTCGATTC TCTTAG |
| Gene | >Hirsu2|1546 ATGGGGACTTCTCCCACCATCGCCTCTGCCCGAGGTCAGTCGAAGTCCCCCAAGCCGTCGAGCAACACGCCCCCT CGCCAAGGTGAGCCTCTTCGACCCTTCCCCCTTTCTCTAACACGACGTGCACTTGCCCGTGCCCTGTCATATCCT CCCCCCACGCCCCCCCCCCTTCCCCCGACCCTTCCCCCCTTTTCTCTACCTACCCTCGCCATCGTCGTCATTGCT GCCTCTCGGACCTCGTCACTGCCGCGACTACGGGCCTCAACGTCACACTCACCGCTGCGACAGATTCTACGGTAG ACGCCAAAGCCGATTCCACGGGCAAGCTCGACGGCCCGTCCAATGCCGAAGCTGCCAAACCGCTCGCGCCGCCGC CTCGACCCGGTCAACCACAACCGCAACAGGGCTCCAACACGCCCGACTTTTTCGCGCCTCAAGTCGGCGGATCCC TCAGTCTGGAGCCCAATCCCTTCGAGCAGTCTTTTGGGGGCGGAGGCCCAGAGACCCCTGGAGGCACGAAGCTCC CCTCCGTCGCCGCGCTGACGTCGCCCTCGTCGCTGCTGCCCGGCAGCAACGCCACTCCTTTCAACTGGGGCGGAG GATCGCTGCGTACCGGCCCGCTGAGCCCTGCCATGTTGTCGGGACCGGCCAACGATTACTTCAGCGACACACATC ACCTCCGAGGCGGCTTCCCGACACCCAACGAATCGTCCCTCAGATCCGGGCTCACGCCGGGCGGCAGCGGGTCCA TGTTCCCGGCCCCGAGCCCCAACTCCCAGGCCCTCTTCGCCCAGCTCGCCAGCGGCGGCGCGACCCCCAGCACGC TCGATTTCCACCGCACAGCGCTGAGCGCCGCCGCCAAGCGCGATCAGACCGGCGGCGGCCAGCAACAGGGACAAC CACAACAGCAGCCTCCGCCCCAACCGCAGCAGCAGCCGCAGCAGCCGCCGCCGCCCCAGCAGCAGCCGCCGCCGC CCCAGCAAGCGGCCACCTCCCAACCGCACGACATGCCAAACGGCGCGTCGGCGGTCAAGCCCGAAGCCAAGCACG GCCCCGGGCCCTTCGACCCTCATGATAACGACGCCGCCAACGGTCTCTTCATGCTCGCCCAGGGAGCCCAGGGCC GGAGCGGCAACCAGAGCTCAGGCCAGTTCCCGACCCCGTCCGCCTCCAGCCACGCCCACCCCGCTCCCGAAACGC CCCAGAACGCCGAGATGTCGCCGCAAATGTCGAGCGCCCACGCCGCATCCATCGACTCGGGGCGAGGCGGGAGCG AAGGAAGCCTACTGTCGGATGACGGTGAGCAGACGAGACCGGCCATCAGGGGCAAGAGCAAAAAGGGCTCATCAG CCTCGCTCGGGCGGAGAAAAGCGGAGGACGCGCCAGCCAAGGCTCCGCCGAGTAAGAAAGCCAAGGGCAGCAACG GCAGCATCATGAACGGCAGCTTCGACTTCTCCGACGACGACATGAAGAAACTGGATGAAGGAGGCTCCAAGTCCA AGATGACGGACGAGGAGAAGCGTAAGAACTTCCTTGAGAGGAATCGGTAAGTCTCGCTCGTTCTCGTCGTCGGTT TTGTTCACTGCGGATGCGTCTTTCCCCCCACGCCCCCTCGGCGTCTCCATCCCCGTCGCCGCTCCTCGCGCTAAT CGTACTCGGTAAATTGCAGCGTCGCGGCACTCAAGTGTCGGCAGCGAAAGAAACAATGGCTGGCGAACCTTCAGA GCAAAGTGGAGATGTACAGCAGTGAAAACGATGCGCTGACAGCGCAGATCACTCAACTGCGCGAAGAGGTCGTCA ACCTCAAAACGCTCCTGCTGGCCCACAAGGATTGCCCCGTCACCCAACAACAAGGTCTCCACGGCGCCTTCATGT CGCAAGTCGTGGAGCCATTCAATGCCCAAATGAACCCATATGGAATGGCCGGTCCAATGCCCAATCAACAGGTCA TGGCGGGCCAAGGTGTTCAGCGTCGATTCTCTTAG |