Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|152
Gene name
LocationContig_1025:79..747
Strand+
Gene length (bp)668
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole 0.1897 0.0419 0.3674 0.7862 0.2072 0.0733 0.5488 0.5766 0.5133 0.0773

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup370
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01409
Ophiocordyceps camponoti-floridani Ophcf2|04180
Ophiocordyceps camponoti-rufipedis Ophun1|1047
Ophiocordyceps camponoti-rufipedis Ophun1|6789
Ophiocordyceps kimflemingae Ophio5|2147
Ophiocordyceps kimflemingae Ophio5|2182
Ophiocordyceps subramaniannii Hirsu2|10238
Ophiocordyceps subramaniannii Hirsu2|152 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|152
LPGLGPLRAGDQFAAGAADGPVSDEQCARDYVAPRLVFPAHSSPLDIKFDAHGSRAFISFHGSWNRESPVGYRIA
VVDFNNATGQPVAPRDSTDAAVDVLSAPDLTACPDGCFRPVGLAWDRSGRLWFTSDSTGEIFLLQQDAAGSDAAS
VLLASRRTAAWAALLWAAVVIALVA*
Coding >Hirsu2|152
CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG
CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC
GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCC
GTCGTCGACTTCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTC
TCGGCGCCCGACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGC
CTCTGGTTCACGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCC
GTGCTGCTGGCGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCG
TGA
Transcript >Hirsu2|152
CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG
CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC
GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCC
GTCGTCGACTTCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTC
TCGGCGCCCGACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGC
CTCTGGTTCACGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCC
GTGCTGCTGGCGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCG
TGA
Gene >Hirsu2|152
CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG
CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC
GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGTCAGTCTTCTTCTCCCCCTCTCCCCCTTTTTGTC
CCTTGACGCGTCCGCCATCCTCGTGCGCGCGCGCGCCGGGGAAGCCCGCGTCGACAACCGGGGTGGGCGCTCGAC
GCCGTCGCCGCCGCTGACCCCGGCCTCAAGGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCCGTCGTCGACT
TCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTCTCGGCGCCCG
ACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGCCTCTGGTTCA
CGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCCGTGCTGCTGG
CGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail