Protein ID | Hirsu2|152 |
Gene name | |
Location | Contig_1025:79..747 |
Strand | + |
Gene length (bp) | 668 |
Transcript length (bp) | 528 |
Coding sequence length (bp) | 528 |
Protein length (aa) | 176 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Lysosome/Vacuole | 0.1897 | 0.0419 | 0.3674 | 0.7862 | 0.2072 | 0.0733 | 0.5488 | 0.5766 | 0.5133 | 0.0773 |
Orthofinder run ID | 4 |
Orthogroup | 370 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|152 LPGLGPLRAGDQFAAGAADGPVSDEQCARDYVAPRLVFPAHSSPLDIKFDAHGSRAFISFHGSWNRESPVGYRIA VVDFNNATGQPVAPRDSTDAAVDVLSAPDLTACPDGCFRPVGLAWDRSGRLWFTSDSTGEIFLLQQDAAGSDAAS VLLASRRTAAWAALLWAAVVIALVA* |
Coding | >Hirsu2|152 CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCC GTCGTCGACTTCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTC TCGGCGCCCGACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGC CTCTGGTTCACGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCC GTGCTGCTGGCGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCG TGA |
Transcript | >Hirsu2|152 CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCC GTCGTCGACTTCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTC TCGGCGCCCGACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGC CTCTGGTTCACGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCC GTGCTGCTGGCGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCG TGA |
Gene | >Hirsu2|152 CTGCCGGGCCTCGGCCCGCTCCGCGCCGGCGACCAGTTCGCCGCCGGCGCCGCTGACGGGCCCGTCTCGGACGAG CAGTGCGCCCGGGACTACGTCGCCCCGCGCCTCGTCTTTCCGGCGCACTCGTCGCCGCTCGACATCAAGTTCGAC GCCCACGGGTCGAGGGCCTTCATCTCCTTCCACGGCAGCTGTCAGTCTTCTTCTCCCCCTCTCCCCCTTTTTGTC CCTTGACGCGTCCGCCATCCTCGTGCGCGCGCGCGCCGGGGAAGCCCGCGTCGACAACCGGGGTGGGCGCTCGAC GCCGTCGCCGCCGCTGACCCCGGCCTCAAGGGAACCGCGAGAGTCCCGTCGGCTACCGCATAGCCGTCGTCGACT TCAACAACGCCACGGGCCAGCCCGTGGCCCCGCGCGACAGCACCGACGCCGCCGTCGACGTGCTCTCGGCGCCCG ACCTGACCGCCTGCCCCGACGGCTGCTTCCGCCCCGTCGGCCTCGCCTGGGACCGGAGCGGCCGCCTCTGGTTCA CGTCCGACTCCACCGGCGAGATCTTCCTCCTCCAGCAGGACGCCGCCGGCAGCGATGCCGCCTCCGTGCTGCTGG CGTCGAGACGCACCGCCGCATGGGCTGCCTTGCTCTGGGCCGCTGTCGTCATTGCCCTCGTTGCGTGA |