Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1515
Gene name
Location	Contig_1335:789..2187
Strand	-
Gene length (bp)	1398
Transcript length (bp)	1296
Coding sequence length (bp)	1296
Protein length (aa)	432

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03388	Lectin_leg-like	Legume-like lectin family	1.9E-23	60	238

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43555\|EMP47_YEAST	Protein EMP47 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP47 PE=1 SV=1	11	236	9.0E-19
sp\|Q2HJD1\|LMA2L_BOVIN	VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1	60	238	6.0E-09
sp\|Q5RCF0\|LMA2L_PONAB	VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1	60	238	1.0E-08
sp\|Q9H0V9\|LMA2L_HUMAN	VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1	60	238	1.0E-08
sp\|P59481\|LMA2L_MOUSE	VIP36-like protein OS=Mus musculus GN=Lman2l PE=1 SV=1	60	253	2.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43555\|EMP47_YEAST	Protein EMP47 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP47 PE=1 SV=1	11	236	9.0E-19
sp\|Q2HJD1\|LMA2L_BOVIN	VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1	60	238	6.0E-09
sp\|Q5RCF0\|LMA2L_PONAB	VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1	60	238	1.0E-08
sp\|Q9H0V9\|LMA2L_HUMAN	VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1	60	238	1.0E-08
sp\|P59481\|LMA2L_MOUSE	VIP36-like protein OS=Mus musculus GN=Lman2l PE=1 SV=1	60	253	2.0E-08
sp\|Q9HAT1\|LMA1L_HUMAN	Protein ERGIC-53-like OS=Homo sapiens GN=LMAN1L PE=2 SV=2	63	245	2.0E-07
sp\|O42707\|YOC5_SCHPO	L-type lectin-like domain-containing protein C4F6.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4F6.05c PE=2 SV=2	77	238	3.0E-07

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GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	397	419	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1515 MRGPALSSALAALLAAHGCRSEALIPELSFGHSGRLIPEDGPAGRIPHFAVSGQPWQPELLSNKVILTPVAPGNM RGAVWAEAPLERSVWTAEVEFRATGAERGGGNLNVWLAAQGARAVGSNSIYTVGKFDGLALVVDSHGGAGGMVRG FLNDGSVDFKQQSSVDRLAFGHCAYAYRNLGRPSVLRLRQSHDSFRLDVDGHACFETDKVSVPSGYHWGVTAATP DNPDSFELFKLVVSSDSTVSSGADKAEHHHAAAAAAAHHEHEAPQKQSQPPPPPPPDEPAAHFKTSQAQFEDLHN RLQGLMHHVSGAWAAVTELQRQAEQRHGETAAALDGLRRARDDAGDVPQRLRELEREVRAMRSDINAKLAAHHDS LQGYLTDHHATLAGTVARAVPGHGRLILVFVGSQLLLVAAYVVYKRRRASSPKKYL*
Coding	>Hirsu2\|1515 ATGCGAGGACCGGCCCTGTCGTCGGCGCTGGCCGCGCTGTTGGCCGCCCATGGCTGCCGTTCCGAGGCGCTCATC CCCGAGCTCAGCTTCGGCCATTCCGGACGATTGATCCCCGAAGACGGCCCCGCCGGACGGATCCCGCACTTCGCC GTGTCCGGGCAGCCGTGGCAGCCGGAGCTGCTGTCGAACAAGGTGATACTGACGCCCGTGGCGCCGGGCAACATG CGCGGGGCGGTGTGGGCGGAGGCGCCGCTGGAGCGCAGCGTGTGGACGGCCGAGGTCGAGTTCCGGGCGACCGGG GCGGAGCGCGGCGGCGGCAACCTCAACGTGTGGCTGGCGGCGCAGGGCGCGCGCGCCGTCGGCAGCAACAGCATC TACACGGTCGGCAAGTTCGACGGGCTGGCGCTCGTCGTCGACTCGCACGGCGGCGCCGGCGGCATGGTGCGCGGC TTCCTCAACGACGGCAGCGTCGACTTCAAGCAGCAGTCGAGCGTCGACCGGCTGGCCTTTGGCCACTGCGCCTAC GCCTACCGCAACCTGGGCCGGCCGTCGGTCCTGCGCCTGCGCCAGAGCCACGACAGCTTCCGCCTCGACGTCGAC GGCCACGCCTGCTTCGAGACGGACAAGGTCAGCGTCCCGTCCGGCTACCACTGGGGCGTCACGGCCGCGACGCCC GACAACCCGGACTCGTTCGAGCTCTTCAAGCTCGTCGTCAGCTCCGACTCGACCGTCTCCAGCGGCGCTGACAAG GCCGAGCACCACCACGCCGCCGCCGCCGCCGCCGCCCACCACGAGCACGAGGCGCCGCAGAAGCAGTCGCAGCCG CCGCCGCCGCCGCCGCCCGACGAGCCGGCCGCGCACTTCAAGACGTCGCAGGCCCAGTTCGAGGACCTGCACAAC CGGCTGCAGGGCCTGATGCACCACGTCTCGGGCGCCTGGGCCGCCGTGACGGAGCTGCAGCGCCAGGCGGAGCAG CGCCACGGCGAGACGGCGGCGGCGCTCGACGGCCTGCGCCGCGCCCGCGACGACGCCGGCGACGTGCCGCAGCGC CTGCGCGAGCTCGAGCGCGAGGTGCGCGCCATGCGCAGCGACATCAACGCCAAGCTGGCCGCCCACCACGACTCG CTGCAGGGCTACCTCACCGACCACCACGCCACCCTGGCCGGCACCGTCGCCCGCGCCGTCCCCGGCCACGGCCGC CTCATCCTCGTCTTCGTCGGCAGCCAGCTGCTCCTCGTCGCCGCCTACGTAGTCTACAAGCGCCGCCGCGCCAGC AGCCCCAAGAAGTATCTCTGA
Transcript	>Hirsu2\|1515 ATGCGAGGACCGGCCCTGTCGTCGGCGCTGGCCGCGCTGTTGGCCGCCCATGGCTGCCGTTCCGAGGCGCTCATC CCCGAGCTCAGCTTCGGCCATTCCGGACGATTGATCCCCGAAGACGGCCCCGCCGGACGGATCCCGCACTTCGCC GTGTCCGGGCAGCCGTGGCAGCCGGAGCTGCTGTCGAACAAGGTGATACTGACGCCCGTGGCGCCGGGCAACATG CGCGGGGCGGTGTGGGCGGAGGCGCCGCTGGAGCGCAGCGTGTGGACGGCCGAGGTCGAGTTCCGGGCGACCGGG GCGGAGCGCGGCGGCGGCAACCTCAACGTGTGGCTGGCGGCGCAGGGCGCGCGCGCCGTCGGCAGCAACAGCATC TACACGGTCGGCAAGTTCGACGGGCTGGCGCTCGTCGTCGACTCGCACGGCGGCGCCGGCGGCATGGTGCGCGGC TTCCTCAACGACGGCAGCGTCGACTTCAAGCAGCAGTCGAGCGTCGACCGGCTGGCCTTTGGCCACTGCGCCTAC GCCTACCGCAACCTGGGCCGGCCGTCGGTCCTGCGCCTGCGCCAGAGCCACGACAGCTTCCGCCTCGACGTCGAC GGCCACGCCTGCTTCGAGACGGACAAGGTCAGCGTCCCGTCCGGCTACCACTGGGGCGTCACGGCCGCGACGCCC GACAACCCGGACTCGTTCGAGCTCTTCAAGCTCGTCGTCAGCTCCGACTCGACCGTCTCCAGCGGCGCTGACAAG GCCGAGCACCACCACGCCGCCGCCGCCGCCGCCGCCCACCACGAGCACGAGGCGCCGCAGAAGCAGTCGCAGCCG CCGCCGCCGCCGCCGCCCGACGAGCCGGCCGCGCACTTCAAGACGTCGCAGGCCCAGTTCGAGGACCTGCACAAC CGGCTGCAGGGCCTGATGCACCACGTCTCGGGCGCCTGGGCCGCCGTGACGGAGCTGCAGCGCCAGGCGGAGCAG CGCCACGGCGAGACGGCGGCGGCGCTCGACGGCCTGCGCCGCGCCCGCGACGACGCCGGCGACGTGCCGCAGCGC CTGCGCGAGCTCGAGCGCGAGGTGCGCGCCATGCGCAGCGACATCAACGCCAAGCTGGCCGCCCACCACGACTCG CTGCAGGGCTACCTCACCGACCACCACGCCACCCTGGCCGGCACCGTCGCCCGCGCCGTCCCCGGCCACGGCCGC CTCATCCTCGTCTTCGTCGGCAGCCAGCTGCTCCTCGTCGCCGCCTACGTAGTCTACAAGCGCCGCCGCGCCAGC AGCCCCAAGAAGTATCTCTGA
Gene	>Hirsu2\|1515 ATGCGAGGACCGGCCCTGTCGTCGGCGCTGGCCGCGCTGTTGGCCGCCCATGGCTGCCGTTCCGAGGCGCTCATC CCCGAGCTCAGCTTCGGCCATTCCGGACGGTGAGTTTTTTTCTTGTCTCTCTGTCTCCCTCTGTCTCGCTCTCTC GGTTGTTGCCCGGAAGCTAACGATGACGTCTTTTTTTTTTTTCTCCTCTCTTCAAGATTGATCCCCGAAGACGGC CCCGCCGGACGGATCCCGCACTTCGCCGTGTCCGGGCAGCCGTGGCAGCCGGAGCTGCTGTCGAACAAGGTGATA CTGACGCCCGTGGCGCCGGGCAACATGCGCGGGGCGGTGTGGGCGGAGGCGCCGCTGGAGCGCAGCGTGTGGACG GCCGAGGTCGAGTTCCGGGCGACCGGGGCGGAGCGCGGCGGCGGCAACCTCAACGTGTGGCTGGCGGCGCAGGGC GCGCGCGCCGTCGGCAGCAACAGCATCTACACGGTCGGCAAGTTCGACGGGCTGGCGCTCGTCGTCGACTCGCAC GGCGGCGCCGGCGGCATGGTGCGCGGCTTCCTCAACGACGGCAGCGTCGACTTCAAGCAGCAGTCGAGCGTCGAC CGGCTGGCCTTTGGCCACTGCGCCTACGCCTACCGCAACCTGGGCCGGCCGTCGGTCCTGCGCCTGCGCCAGAGC CACGACAGCTTCCGCCTCGACGTCGACGGCCACGCCTGCTTCGAGACGGACAAGGTCAGCGTCCCGTCCGGCTAC CACTGGGGCGTCACGGCCGCGACGCCCGACAACCCGGACTCGTTCGAGCTCTTCAAGCTCGTCGTCAGCTCCGAC TCGACCGTCTCCAGCGGCGCTGACAAGGCCGAGCACCACCACGCCGCCGCCGCCGCCGCCGCCCACCACGAGCAC GAGGCGCCGCAGAAGCAGTCGCAGCCGCCGCCGCCGCCGCCGCCCGACGAGCCGGCCGCGCACTTCAAGACGTCG CAGGCCCAGTTCGAGGACCTGCACAACCGGCTGCAGGGCCTGATGCACCACGTCTCGGGCGCCTGGGCCGCCGTG ACGGAGCTGCAGCGCCAGGCGGAGCAGCGCCACGGCGAGACGGCGGCGGCGCTCGACGGCCTGCGCCGCGCCCGC GACGACGCCGGCGACGTGCCGCAGCGCCTGCGCGAGCTCGAGCGCGAGGTGCGCGCCATGCGCAGCGACATCAAC GCCAAGCTGGCCGCCCACCACGACTCGCTGCAGGGCTACCTCACCGACCACCACGCCACCCTGGCCGGCACCGTC GCCCGCGCCGTCCCCGGCCACGGCCGCCTCATCCTCGTCTTCGTCGGCAGCCAGCTGCTCCTCGTCGCCGCCTAC GTAGTCTACAAGCGCCGCCGCGCCAGCAGCCCCAAGAAGTATCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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