Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1506
Gene name
LocationContig_1330:7099..7312
Strand-
Gene length (bp)213
Transcript length (bp)213
Coding sequence length (bp)213
Protein length (aa) 71

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09288 UBA_3 Fungal ubiquitin-associated domain 1.5E-06 16 46

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1506
LERADSASVTLCRYKGYNKDLVDRFVNMGFDVDSVVDAFIYVGIDRNNGRDYELEEAYMGDITARLLGEQ*
Coding >Hirsu2|1506
CTGGAGAGAGCTGACAGTGCGTCCGTCACGTTGTGCAGGTACAAGGGCTACAATAAGGACCTGGTTGATCGCTTT
GTCAACATGGGCTTCGACGTCGACTCCGTAGTCGACGCCTTCATTTACGTGGGTATCGACCGCAACAACGGCCGC
GACTACGAGCTCGAAGAGGCGTACATGGGCGACATCACAGCCCGGCTCCTCGGCGAGCAATGA
Transcript >Hirsu2|1506
CTGGAGAGAGCTGACAGTGCGTCCGTCACGTTGTGCAGGTACAAGGGCTACAATAAGGACCTGGTTGATCGCTTT
GTCAACATGGGCTTCGACGTCGACTCCGTAGTCGACGCCTTCATTTACGTGGGTATCGACCGCAACAACGGCCGC
GACTACGAGCTCGAAGAGGCGTACATGGGCGACATCACAGCCCGGCTCCTCGGCGAGCAATGA
Gene >Hirsu2|1506
CTGGAGAGAGCTGACAGTGCGTCCGTCACGTTGTGCAGGTACAAGGGCTACAATAAGGACCTGGTTGATCGCTTT
GTCAACATGGGCTTCGACGTCGACTCCGTAGTCGACGCCTTCATTTACGTGGGTATCGACCGCAACAACGGCCGC
GACTACGAGCTCGAAGAGGCGTACATGGGCGACATCACAGCCCGGCTCCTCGGCGAGCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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