© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1503 |
| Gene name | |
| Location | Contig_1330:1386..2547 |
| Strand | + |
| Gene length (bp) | 1161 |
| Transcript length (bp) | 1161 |
| Coding sequence length (bp) | 1161 |
| Protein length (aa) | 387 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1662 | 0.1879 | 0.9198 | 0.0947 | 0.1166 | 0.1493 | 0.1391 | 0.2941 | 0.3529 | 0.0026 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 23 | 0.998414 |
| Orthofinder run ID | 4 |
| Orthogroup | 6529 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|1468 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|6209 |
| Ophiocordyceps subramaniannii | Hirsu2|1503 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1503 MPKLSILLELALSLSCAVAGTHAACWPTFVLDGAAEHGFHRAHAPFAIRLLCGKLDAESVAVRVRDAGSGTALES RASSTLDRVVVQAGPGPGPKTITVTARDERRNPVSGSFTMLFGSVDMPVRVVDEQGRPVSGAGVTAVASGRFKQH GVTDSTGAVTLANLPATEIDVFASSAEDGAVSTSLVASPSAITLRLLSPSHLGRLDSVSRDGTVQAGVSAHVARR LSNACQSPTPNSCDFYADCAERALQCGPEGYPLRFGDRNCKKFVSRLDMFSSHGQDWIMKTMSCLQRALIGPMNE DGATCESVKKAAFDSHPNCYIDNGFCDLSLSDLLQVVMTVKRDLFYGHAVDQVMTTAKGCSSHYIAQVKEKLDQL PRSENEAFDDM* |
| Coding | >Hirsu2|1503 ATGCCCAAGCTCAGCATTCTGCTCGAGCTCGCCCTCTCGCTGTCGTGCGCCGTCGCCGGCACCCACGCGGCCTGT TGGCCGACCTTTGTCCTCGACGGCGCCGCCGAGCACGGCTTCCACCGGGCGCACGCGCCTTTCGCCATCAGGCTG CTGTGCGGCAAGCTCGACGCGGAGTCGGTCGCCGTCCGAGTCCGCGACGCCGGCTCGGGCACCGCGCTCGAGAGC CGCGCGAGCAGCACTCTCGACCGCGTCGTGGTGCAGGCCGGGCCGGGCCCCGGGCCCAAGACCATCACCGTCACC GCTCGAGATGAGCGTCGGAACCCGGTCTCGGGCAGCTTCACGATGCTCTTCGGGTCCGTCGACATGCCGGTGCGC GTCGTCGACGAGCAGGGCAGACCGGTGTCCGGGGCGGGCGTGACGGCCGTGGCAAGCGGCCGCTTCAAGCAACAC GGTGTCACGGACAGCACCGGTGCCGTCACTCTCGCCAACCTGCCCGCCACAGAGATCGATGTGTTTGCTAGCTCG GCCGAGGACGGAGCCGTCTCGACGTCCCTGGTCGCAAGCCCCAGCGCCATCACGCTACGACTCCTCTCCCCGTCT CATCTGGGTCGTCTCGACAGCGTCAGCAGGGACGGGACAGTTCAGGCCGGCGTGTCCGCCCACGTTGCCCGGCGT CTCTCCAACGCGTGCCAGAGTCCGACCCCCAACTCCTGCGACTTCTACGCAGACTGCGCGGAGAGGGCGCTTCAG TGCGGCCCCGAGGGCTACCCGTTGCGTTTCGGCGACAGGAATTGCAAAAAGTTCGTGTCCCGGCTGGACATGTTC AGCAGCCACGGCCAGGACTGGATCATGAAGACCATGTCGTGTCTGCAGCGGGCTCTGATCGGGCCCATGAACGAG GACGGGGCCACGTGCGAGTCGGTCAAGAAGGCGGCCTTCGATTCTCACCCAAACTGCTACATCGACAACGGCTTC TGCGACCTGTCTCTGAGCGACCTGCTGCAAGTCGTCATGACCGTTAAGAGGGATCTTTTCTATGGGCACGCCGTC GATCAGGTGATGACGACCGCCAAGGGGTGCTCAAGTCATTATATCGCCCAAGTCAAGGAGAAGCTGGATCAGCTG CCAAGATCCGAGAATGAAGCATTTGATGACATGTAG |
| Transcript | >Hirsu2|1503 ATGCCCAAGCTCAGCATTCTGCTCGAGCTCGCCCTCTCGCTGTCGTGCGCCGTCGCCGGCACCCACGCGGCCTGT TGGCCGACCTTTGTCCTCGACGGCGCCGCCGAGCACGGCTTCCACCGGGCGCACGCGCCTTTCGCCATCAGGCTG CTGTGCGGCAAGCTCGACGCGGAGTCGGTCGCCGTCCGAGTCCGCGACGCCGGCTCGGGCACCGCGCTCGAGAGC CGCGCGAGCAGCACTCTCGACCGCGTCGTGGTGCAGGCCGGGCCGGGCCCCGGGCCCAAGACCATCACCGTCACC GCTCGAGATGAGCGTCGGAACCCGGTCTCGGGCAGCTTCACGATGCTCTTCGGGTCCGTCGACATGCCGGTGCGC GTCGTCGACGAGCAGGGCAGACCGGTGTCCGGGGCGGGCGTGACGGCCGTGGCAAGCGGCCGCTTCAAGCAACAC GGTGTCACGGACAGCACCGGTGCCGTCACTCTCGCCAACCTGCCCGCCACAGAGATCGATGTGTTTGCTAGCTCG GCCGAGGACGGAGCCGTCTCGACGTCCCTGGTCGCAAGCCCCAGCGCCATCACGCTACGACTCCTCTCCCCGTCT CATCTGGGTCGTCTCGACAGCGTCAGCAGGGACGGGACAGTTCAGGCCGGCGTGTCCGCCCACGTTGCCCGGCGT CTCTCCAACGCGTGCCAGAGTCCGACCCCCAACTCCTGCGACTTCTACGCAGACTGCGCGGAGAGGGCGCTTCAG TGCGGCCCCGAGGGCTACCCGTTGCGTTTCGGCGACAGGAATTGCAAAAAGTTCGTGTCCCGGCTGGACATGTTC AGCAGCCACGGCCAGGACTGGATCATGAAGACCATGTCGTGTCTGCAGCGGGCTCTGATCGGGCCCATGAACGAG GACGGGGCCACGTGCGAGTCGGTCAAGAAGGCGGCCTTCGATTCTCACCCAAACTGCTACATCGACAACGGCTTC TGCGACCTGTCTCTGAGCGACCTGCTGCAAGTCGTCATGACCGTTAAGAGGGATCTTTTCTATGGGCACGCCGTC GATCAGGTGATGACGACCGCCAAGGGGTGCTCAAGTCATTATATCGCCCAAGTCAAGGAGAAGCTGGATCAGCTG CCAAGATCCGAGAATGAAGCATTTGATGACATGTAG |
| Gene | >Hirsu2|1503 ATGCCCAAGCTCAGCATTCTGCTCGAGCTCGCCCTCTCGCTGTCGTGCGCCGTCGCCGGCACCCACGCGGCCTGT TGGCCGACCTTTGTCCTCGACGGCGCCGCCGAGCACGGCTTCCACCGGGCGCACGCGCCTTTCGCCATCAGGCTG CTGTGCGGCAAGCTCGACGCGGAGTCGGTCGCCGTCCGAGTCCGCGACGCCGGCTCGGGCACCGCGCTCGAGAGC CGCGCGAGCAGCACTCTCGACCGCGTCGTGGTGCAGGCCGGGCCGGGCCCCGGGCCCAAGACCATCACCGTCACC GCTCGAGATGAGCGTCGGAACCCGGTCTCGGGCAGCTTCACGATGCTCTTCGGGTCCGTCGACATGCCGGTGCGC GTCGTCGACGAGCAGGGCAGACCGGTGTCCGGGGCGGGCGTGACGGCCGTGGCAAGCGGCCGCTTCAAGCAACAC GGTGTCACGGACAGCACCGGTGCCGTCACTCTCGCCAACCTGCCCGCCACAGAGATCGATGTGTTTGCTAGCTCG GCCGAGGACGGAGCCGTCTCGACGTCCCTGGTCGCAAGCCCCAGCGCCATCACGCTACGACTCCTCTCCCCGTCT CATCTGGGTCGTCTCGACAGCGTCAGCAGGGACGGGACAGTTCAGGCCGGCGTGTCCGCCCACGTTGCCCGGCGT CTCTCCAACGCGTGCCAGAGTCCGACCCCCAACTCCTGCGACTTCTACGCAGACTGCGCGGAGAGGGCGCTTCAG TGCGGCCCCGAGGGCTACCCGTTGCGTTTCGGCGACAGGAATTGCAAAAAGTTCGTGTCCCGGCTGGACATGTTC AGCAGCCACGGCCAGGACTGGATCATGAAGACCATGTCGTGTCTGCAGCGGGCTCTGATCGGGCCCATGAACGAG GACGGGGCCACGTGCGAGTCGGTCAAGAAGGCGGCCTTCGATTCTCACCCAAACTGCTACATCGACAACGGCTTC TGCGACCTGTCTCTGAGCGACCTGCTGCAAGTCGTCATGACCGTTAAGAGGGATCTTTTCTATGGGCACGCCGTC GATCAGGTGATGACGACCGCCAAGGGGTGCTCAAGTCATTATATCGCCCAAGTCAAGGAGAAGCTGGATCAGCTG CCAAGATCCGAGAATGAAGCATTTGATGACATGTAG |