Protein ID | Hirsu2|1492 |
Gene name | |
Location | Contig_133:1905..2313 |
Strand | + |
Gene length (bp) | 408 |
Transcript length (bp) | 408 |
Coding sequence length (bp) | 408 |
Protein length (aa) | 136 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09044 | Kp4 | Kp4 | 5.9E-44 | 11 | 125 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q90121|KP4T_UMV4 | KP4 killer toxin OS=Ustilago maydis P4 virus GN=M2A PE=1 SV=1 | 12 | 127 | 4.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005576 | extracellular region | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0569 | 0.0567 | 0.9309 | 0.1005 | 0.0796 | 0.0111 | 0.0453 | 0.1105 | 0.028 | 0.0029 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999726 |
Orthofinder run ID | 4 |
Orthogroup | 386 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1492 MRLLQAVSGAVAALAAAASAEGINCHGSSNCGNAGFKLSGLRSTAQGVDDNRWYQNGQHIACWRALDGSGFCAFL QGTGGLPGREIKRLLQELVNHGCAKCGSVPAFYPQDNDISHHGILTVNYVASTGGCGGVC* |
Coding | >Hirsu2|1492 ATGCGTCTCCTGCAGGCCGTGAGCGGCGCGGTGGCGGCGCTGGCGGCGGCCGCGTCGGCCGAGGGCATCAACTGC CACGGCAGCAGCAACTGCGGCAACGCCGGCTTCAAGCTGTCGGGCCTGCGCAGCACGGCGCAGGGCGTCGACGAC AACCGCTGGTACCAGAACGGCCAGCACATCGCCTGCTGGCGCGCCCTCGACGGCTCCGGCTTCTGCGCCTTCCTC CAGGGCACCGGCGGCCTGCCCGGCCGCGAGATCAAGCGCCTGCTGCAGGAGCTCGTCAACCACGGCTGCGCCAAG TGCGGCAGCGTCCCGGCCTTCTACCCCCAGGACAACGACATCAGCCACCACGGCATCCTGACGGTCAACTACGTC GCCTCCACCGGCGGCTGTGGCGGCGTCTGTTGA |
Transcript | >Hirsu2|1492 ATGCGTCTCCTGCAGGCCGTGAGCGGCGCGGTGGCGGCGCTGGCGGCGGCCGCGTCGGCCGAGGGCATCAACTGC CACGGCAGCAGCAACTGCGGCAACGCCGGCTTCAAGCTGTCGGGCCTGCGCAGCACGGCGCAGGGCGTCGACGAC AACCGCTGGTACCAGAACGGCCAGCACATCGCCTGCTGGCGCGCCCTCGACGGCTCCGGCTTCTGCGCCTTCCTC CAGGGCACCGGCGGCCTGCCCGGCCGCGAGATCAAGCGCCTGCTGCAGGAGCTCGTCAACCACGGCTGCGCCAAG TGCGGCAGCGTCCCGGCCTTCTACCCCCAGGACAACGACATCAGCCACCACGGCATCCTGACGGTCAACTACGTC GCCTCCACCGGCGGCTGTGGCGGCGTCTGTTGA |
Gene | >Hirsu2|1492 ATGCGTCTCCTGCAGGCCGTGAGCGGCGCGGTGGCGGCGCTGGCGGCGGCCGCGTCGGCCGAGGGCATCAACTGC CACGGCAGCAGCAACTGCGGCAACGCCGGCTTCAAGCTGTCGGGCCTGCGCAGCACGGCGCAGGGCGTCGACGAC AACCGCTGGTACCAGAACGGCCAGCACATCGCCTGCTGGCGCGCCCTCGACGGCTCCGGCTTCTGCGCCTTCCTC CAGGGCACCGGCGGCCTGCCCGGCCGCGAGATCAAGCGCCTGCTGCAGGAGCTCGTCAACCACGGCTGCGCCAAG TGCGGCAGCGTCCCGGCCTTCTACCCCCAGGACAACGACATCAGCCACCACGGCATCCTGACGGTCAACTACGTC GCCTCCACCGGCGGCTGTGGCGGCGTCTGTTGA |